Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001572-TA|BGIBMGA001572-PA|IPR014001|DEAD-like
helicases, N-terminal, IPR001650|Helicase, C-terminal,
IPR014021|Helicase superfamily 1 and 2 ATP-binding,
IPR007502|Helicase-associated region, IPR011709|Protein of unknown
function DUF1605
(1153 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g32490.1 68414.m04009 RNA helicase, putative similar to ATP-d... 348 1e-95
At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative si... 347 3e-95
At4g16680.1 68417.m02519 RNA helicase, putative similar to SP|Q1... 345 1e-94
At2g35340.1 68415.m04333 RNA helicase, putative similar to ATP-d... 337 2e-92
At5g13010.1 68418.m01491 RNA helicase, putative similar to DEAH-... 324 2e-88
At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1... 323 4e-88
At3g62310.1 68416.m07000 RNA helicase, putative similar to SP|P5... 309 6e-84
At2g47250.1 68415.m05900 RNA helicase, putative similar to SP|P5... 308 2e-83
At4g18465.1 68417.m02740 RNA helicase, putative similar to SP|Q1... 286 5e-77
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 285 1e-76
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 272 7e-73
At1g26370.1 68414.m03217 RNA helicase, putative similar to SP|Q1... 195 2e-49
At1g48650.1 68414.m05445 helicase domain-containing protein cont... 188 2e-47
At2g01130.1 68415.m00021 helicase domain-containing protein simi... 184 2e-46
At2g35920.1 68415.m04409 helicase domain-containing protein simi... 184 3e-46
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 182 9e-46
At1g58060.1 68414.m06580 helicase domain-containing protein cont... 181 2e-45
At1g58050.1 68414.m06579 helicase domain-containing protein cont... 180 5e-45
At2g30800.1 68415.m03755 DEIH-box RNA/DNA helicase, putative sim... 169 7e-42
At5g04895.1 68418.m00514 helicase domain-containing protein simi... 152 1e-36
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 150 6e-36
At2g47680.1 68415.m05955 zinc finger (CCCH type) helicase family... 130 7e-30
At5g14900.1 68418.m01748 helicase associated (HA2) domain-contai... 57 6e-08
At5g38680.1 68418.m04677 kelch repeat-containing F-box family pr... 34 0.48
At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative simila... 31 4.5
At5g10500.1 68418.m01216 kinase interacting family protein simil... 31 5.9
At4g17220.1 68417.m02590 expressed protein 31 5.9
At2g06690.1 68415.m00747 hypothetical protein includes At2g06610... 31 5.9
At2g06610.1 68415.m00733 hypothetical protein includes At2g06610... 31 5.9
At2g31160.1 68415.m03804 expressed protein contains Pfam profile... 30 7.8
At2g05480.1 68415.m00580 hypothetical protein includes At2g06610... 30 7.8
At1g58602.1 68414.m06655 disease resistance protein (CC-NBS-LRR ... 30 7.8
>At1g32490.1 68414.m04009 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1044
Score = 348 bits (855), Expect = 1e-95
Identities = 201/574 (35%), Positives = 319/574 (55%), Gaps = 31/574 (5%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQP 217
++ + LP+ YR +++ AV+ +V+++ GDTG GK+TQ+PQYLHEAG+ + CTQP
Sbjct: 398 QEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQP 457
Query: 218 RRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSET-LPS 276
RR+A +S++ RVA EM + +VGY IRFE + T + ++T+G+LLR++ E L S
Sbjct: 458 RRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLAS 517
Query: 277 YDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQ 336
Y V+I+DE HER L D L G++K + R ++KL++ SAT++ + F +YF ++A +
Sbjct: 518 YSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYF--DTAPIFS 575
Query: 337 VPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQE 396
PGR Y +E+NY D +D V I+ + + ++ GD+L+F +G +E
Sbjct: 576 FPGRRYPVEINYTSA------PEADYMDAA-IVTILTI----HVREPLGDILVFFTGQEE 624
Query: 397 ITAICDAAQQ----YAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETS 452
I + + K + I+ P+++ L Q K+F+ PEG RK +++TNIAETS
Sbjct: 625 IETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETS 684
Query: 453 VTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSE 512
+TIDGI++VVD G K SY+P + M+ L ISKASA QR GRAGRT PG CYR+Y+
Sbjct: 685 LTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTA 744
Query: 513 QQY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHG 571
Y D+E + PEV R G++D+ F F+D PP E++ +L L G
Sbjct: 745 FNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALG 804
Query: 572 ALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGI-RSIFTTR 630
AL +LT G+ ++ P++ L+K +V+ + D +++ A L I SIF
Sbjct: 805 ALNKLGELTKAGRRMAEFPLDPMLSKMIVVSD---KYKCSDEIISIAAMLSIGGSIFYRP 861
Query: 631 AHRDFDCENARKPDESDH-GDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELT 689
+ +NAR + + GD + LL +Y +W E WC I+ + +
Sbjct: 862 KDKQVHADNARMNFHTGNVGDHIALLKVYSSW----KETNFSTQWCYENYIQVRSMKRAR 917
Query: 690 KLAAQLRGLLQDNNLSETPEPETMSSAERALRHG 723
+ QL GLL+ + + + S +++ G
Sbjct: 918 DIRDQLEGLLERVEIDISSNLNELDSVRKSIVAG 951
>At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative similar
to SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, PF00575:
S1 RNA binding domain
Length = 1168
Score = 347 bits (852), Expect = 3e-95
Identities = 201/572 (35%), Positives = 316/572 (55%), Gaps = 29/572 (5%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQP 217
++ + LP+ + E++ AV + +V++V G+TG GK+TQV QYL EAG+ I CTQP
Sbjct: 509 QEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQP 568
Query: 218 RRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETLPS 276
RR+A +S++KRVA E + +VGY IRFE DT I ++T+G+LLR+ + E L
Sbjct: 569 RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQ 628
Query: 277 YDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQ 336
Y VI+LDE HER + D L G+LK L+ R +++L++ SAT++ + F YF + + +
Sbjct: 629 YSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCN--IFT 686
Query: 337 VPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQE 396
+PGR + +E+ Y + D LD + ++Q+ + + GD+L+F++G +E
Sbjct: 687 IPGRTFPVEILYT------KQPETDYLDAA-LITVLQI----HLTEPEGDILVFLTGQEE 735
Query: 397 ITAICDAAQQ----YAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETS 452
I + C + + + I+LP++S L Q ++FD PP G RK +++TNIAE S
Sbjct: 736 IDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEAS 795
Query: 453 VTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSE 512
+TIDGI +VVD G K+ Y+P ++ L IS+ASA QR GRAGRTGPG CYR+Y+E
Sbjct: 796 LTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 855
Query: 513 QQY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHG 571
Y +M P S PE+ R+ G+ND+ F F+D P +++ +A+ +L G
Sbjct: 856 SAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLG 915
Query: 572 ALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTRA 631
AL LT LG+ ++ P+E L+K L+ A++ D L + A + +IF
Sbjct: 916 ALDEEGLLTKLGRKMAEFPLEPPLSKMLL---ASVDLGCSDEILTMIAMIQTGNIFYRPR 972
Query: 632 HRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELTKL 691
+ + R GD LTLL++Y AW KA+ G WC I+ + L +
Sbjct: 973 EKQAQADQKRAKFFQPEGDHLTLLAVYEAW---KAKNFSG-PWCFENFIQSRSLRRAQDV 1028
Query: 692 AAQLRGLLQDNNLSETPEPETMSSAERALRHG 723
QL ++ L + + +A+ G
Sbjct: 1029 RKQLLSIMDKYKLDVVTAGKNFTKIRKAITAG 1060
>At4g16680.1 68417.m02519 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 883
Score = 345 bits (848), Expect = 1e-94
Identities = 201/576 (34%), Positives = 321/576 (55%), Gaps = 37/576 (6%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQP 217
R+ + LP+ YR E++ ++ +V+++ G+TG GK+TQ+PQYL EAG+ I CTQP
Sbjct: 216 REGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQP 275
Query: 218 RRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSET-LPS 276
RR+A +S++ RVA E+ + +VGY IRFE + T I ++T+G+LLR++ E L S
Sbjct: 276 RRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDS 335
Query: 277 YDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQ 336
Y VII+DE HER L D L ++K + R +++L++ SAT+ K F EYF +SA +
Sbjct: 336 YSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYF--DSARIYL 393
Query: 337 VPGRLYTIELNYKPIFMEERPTRDDRLDPQP-YVQ-IMQLIDNKYPKDERGDLLIFMSGV 394
+PGR Y +E ++ P+P Y++ +++ + + + GD+L+F++G
Sbjct: 394 IPGRRYPVEKLFRKC-------------PEPDYLETVIRTVVQIHQTEAIGDILVFLTGQ 440
Query: 395 QEI----TAICDAAQQYAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAE 450
+EI T + K I+ P++S L Q KVF+ P+G RK +++TNIAE
Sbjct: 441 EEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAE 500
Query: 451 TSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIY 510
TS+TIDG+++V+D G K SY+P + M+ L ISKASA QR GR+GRTGPG C+R+Y
Sbjct: 501 TSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLY 560
Query: 511 SEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQH 570
+ D+EP + PE+ R G+ DV F F+D PPE ++ AL L
Sbjct: 561 N---IKDLEPTTIPEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYAL 617
Query: 571 GALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTR 630
GAL ++T +G+ + PV+ L+K +++GS + K +A ++G S+F
Sbjct: 618 GALDEIGEITKVGERMVEFPVDPMLSK-MIVGSEKYKCSKEIITIAAMLSVG-NSVFYRP 675
Query: 631 AHRDFDCENARK---PDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYE 687
++ + AR D + GD + LL +Y +W EE WC + I+ + +
Sbjct: 676 KNQQVFADKARMDFYEDTENVGDHIALLRVYNSW----KEENYSTQWCCEKFIQSKSMKR 731
Query: 688 LTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHG 723
+ QL GLL + T P + + ++A+ G
Sbjct: 732 ARDIRDQLLGLLNKIGVELTSNPNDLDAIKKAILAG 767
>At2g35340.1 68415.m04333 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1110
Score = 337 bits (829), Expect = 2e-92
Identities = 196/574 (34%), Positives = 318/574 (55%), Gaps = 31/574 (5%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQ---NIACTQP 217
++ K LP+ YR ++++AV++ +V+I+ G+TG GK+TQ+PQYLHEAG+ + CTQP
Sbjct: 464 QEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQP 523
Query: 218 RRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSE-TLPS 276
RR+A +S++ RVA EM + +VGY IRFE + T + ++T+G+LLR++ E L S
Sbjct: 524 RRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGS 583
Query: 277 YDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQ 336
Y VII+DE HER L D L G++K + R ++KL++ SAT++ + F ++F + A + +
Sbjct: 584 YSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFF--DQAPIFR 641
Query: 337 VPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQE 396
PGR Y +++ + D +D + + + K+ GD+L+F+ G +E
Sbjct: 642 FPGRRYPVDICF------TTAPEADYMD-----AAITTVLTIHVKEPLGDVLVFLPGQEE 690
Query: 397 ITAICDAAQQ----YAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETS 452
I A+ + + K + I+ P+++ L Q K+F+ PEG RK +++TNIAETS
Sbjct: 691 IEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETS 750
Query: 453 VTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSE 512
+TIDGI++VVD G K SY+P + M+ L ISKASA QR GRAGRT PG CYR+Y+
Sbjct: 751 LTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTA 810
Query: 513 -QQYTDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHG 571
Y D+E + PE+ R G++++ F F+D PP E++ +L L G
Sbjct: 811 FNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALG 870
Query: 572 ALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGI-RSIFTTR 630
AL +LT G+ ++ P++ L+K +V+ + D +++ A L I SIF
Sbjct: 871 ALNQLGELTKAGRRMAEFPLDPMLSKMIVVSD---KYKCSDEIISIAAMLSIGPSIFYRP 927
Query: 631 AHRDFDCENARKP-DESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELT 689
+ +NA K + GD + L +Y +W E WC I+ + +
Sbjct: 928 KDKQVHADNAMKNFHVGNVGDHIAFLKIYNSW----KETNYSTQWCYENYIQVRSMKRAR 983
Query: 690 KLAAQLRGLLQDNNLSETPEPETMSSAERALRHG 723
+ QL GLL+ + + + S +++ G
Sbjct: 984 DIRDQLEGLLERVEIDVSSNANELDSIRKSIVAG 1017
>At5g13010.1 68418.m01491 RNA helicase, putative similar to DEAH-box
RNA helicase [Chlamydomonas reinhardtii] GI:12044832;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1226
Score = 324 bits (796), Expect = 2e-88
Identities = 193/544 (35%), Positives = 304/544 (55%), Gaps = 31/544 (5%)
Query: 167 LPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACVSLS 226
LP+ + R E++ ++ +V++V G+TG GK+TQ+ Q + + CTQPRR+A +S++
Sbjct: 533 LPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQDGYTIN-GIVGCTQPRRVAAMSVA 591
Query: 227 KRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETLPSYDVIILDEI 285
KRV+ EM T+ K+GY IRFE +T I ++T+G+LLR+ + L Y V+++DE
Sbjct: 592 KRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDEA 651
Query: 286 HERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQVPGRLYTIE 345
HER L D L GILK +V R + KL++ SAT+N + F +F S + +PGR + +
Sbjct: 652 HERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGS--VPIFNIPGRTFPVN 709
Query: 346 LNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQEITAICDAAQ 405
+ Y + P D Q M + P GD+LIFM+G EI A C + +
Sbjct: 710 ILYS-----KTPCED--YVEAAVKQAMTIHITSPP----GDILIFMTGQDEIEAACFSLK 758
Query: 406 QYAEKT--------KNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSVTIDG 457
+ E+ N ++LP++S L Q K+F P +G RKCI++TNIAETS+T+DG
Sbjct: 759 ERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDG 818
Query: 458 IRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQY-T 516
I +V+D+G K ++P M L+ F IS+A++DQR GRAGRTGPG CYR+Y+E Y
Sbjct: 819 IYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLN 878
Query: 517 DMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHGALTSN 576
+M P PE+ R ++++ F F+D PP+E+I N++ +L GAL +
Sbjct: 879 EMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNV 938
Query: 577 EKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTRAHRDFD 636
LT LG + P++ LAK L++G + D L + + L + S+F R +
Sbjct: 939 GGLTDLGWKMVEFPLDPPLAKMLLMGE---RLDCIDEVLTIVSMLSVPSVFFRPKERAEE 995
Query: 637 CENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYELTKLAAQLR 696
+ AR+ D LTLL++Y W + + RG WC ++ + L + ++ +QL
Sbjct: 996 SDAAREKFFVPESDHLTLLNVYQQW--KEHDYRG--DWCNDHYLQVKGLRKAREVRSQLL 1051
Query: 697 GLLQ 700
+L+
Sbjct: 1052 DILK 1055
>At1g27900.1 68414.m03419 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 700
Score = 323 bits (794), Expect = 4e-88
Identities = 202/552 (36%), Positives = 313/552 (56%), Gaps = 38/552 (6%)
Query: 167 LPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---IACTQPRRIACV 223
LP+ + +IV V+ VV++ G+TG GKSTQ+ Q LH G+ IA TQPRR+A V
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAV 63
Query: 224 SLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETLPSYDVIIL 282
S+++RVA E+ VGY IRFE TS T+I ++T+G+LLR+ +S+ L Y VIIL
Sbjct: 64 SVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIIL 123
Query: 283 DEIHERHLMGDFLLGILKCLVHTR-TNIKLVLMSATINIKLFEEYFASESAVVIQVPGRL 341
DE HER L D LLG++K LV R +N K+++ SAT++ + E+F+ V+ VPG+L
Sbjct: 124 DEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSG--CPVLNVPGKL 181
Query: 342 YTIELNYKPIFMEERPTRDDRLDPQPYVQI-MQLIDNKYPKDERGDLLIFMSGVQEITAI 400
Y +E+ Y +ERP Y++ +++ + + ++ GD+LIFM+G +I +
Sbjct: 182 YPVEILYS----KERPVS--------YIESSLKVAIDIHVREPEGDILIFMTGQDDIEKL 229
Query: 401 CDAAQQ----YAEKT-KNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSVTI 455
++ AE + + I+ PLH L Q +VF PP R+ I+STNIAETS+T+
Sbjct: 230 VSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTV 289
Query: 456 DGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQY 515
DG+ +V+DSG VK+ Y+P+S M L ISK A+QR GRAGRT PG CYR+Y Y
Sbjct: 290 DGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVY 349
Query: 516 -TDMEPFSTPEVSRVPXXXXXXXXXXXGVN--DVRRFPFIDTPPEESIENALLELKQHGA 572
D + PE+ R + D+ +F F+D P ES+E+AL +L A
Sbjct: 350 RDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDA 409
Query: 573 LTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALAL----TAALGIRSIFT 628
+ N +T +G+ +S+LP+E SL++ L+ + T + + +A+ T L RS
Sbjct: 410 IDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARS-KP 468
Query: 629 TRAHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRRGIEEQRLYEL 688
+ R D E++ P+ S +GD + LL ++ +W R + WCK G++ + + +
Sbjct: 469 SEKKRKHD-EDSNLPNGSGYGDHIQLLQIFESWDRTNYDP----VWCKENGMQVRGMVFV 523
Query: 689 TKLAAQLRGLLQ 700
+ QL ++Q
Sbjct: 524 KDVRRQLCQIMQ 535
>At3g62310.1 68416.m07000 RNA helicase, putative similar to
SP|P53131 Pre-mRNA splicing factor RNA helicase PRP43
(Helicase JA1) {Saccharomyces cerevisiae}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 726
Score = 309 bits (759), Expect = 6e-84
Identities = 194/566 (34%), Positives = 310/566 (54%), Gaps = 44/566 (7%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---------I 212
+ + LPV + E + + N + +I+ G+TG GK+TQ+PQ++ +A +
Sbjct: 56 EKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLV 115
Query: 213 ACTQPRRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSS 271
CTQPRR+A +S+S+RVA EM +VGY IRFE + T + ++T+G+LLR+ M+
Sbjct: 116 GCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMAD 175
Query: 272 ETLPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASES 331
L Y VIILDE HER L D L G+LK ++ R ++KLV+MSAT+ + F++YF+
Sbjct: 176 PLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG-- 233
Query: 332 AVVIQVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQI-MQLIDNKYPKDERGDLLIF 390
A +++VPGRL+ +E IF + P RD Y++ ++ + + + GD+L+F
Sbjct: 234 APLMKVPGRLHPVE-----IFYTQEPERD-------YLEAAIRTVVQIHMCEPPGDILVF 281
Query: 391 MSGVQEITAICDAAQQYAEKTKNWI----VLPLHSGLSLAEQDKVFDYPPEGV------- 439
++G +EI C + + + V+PL+S L A Q K+FD PE V
Sbjct: 282 LTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPG 341
Query: 440 RKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAG 499
RK ++STNIAETS+TIDGI +V+D G K+ Y+P +++ L ISKASA QR GRAG
Sbjct: 342 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 401
Query: 500 RTGPGVCYRIYSEQQY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEE 558
RT PG C+R+Y+E+ + D++P + PE+ R G++D+ F F+D P E
Sbjct: 402 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 461
Query: 559 SIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALT 618
++ AL L GAL + LT G+ +S P++ +AK L++ + + + L+++
Sbjct: 462 TLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSP---EFNCSNEILSVS 518
Query: 619 AALGIRSIFTTRAHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRR 678
A L + + F + A+ GD LTLL++Y A+ + +WC
Sbjct: 519 AMLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAF----KQNNEDPNWCYEN 574
Query: 679 GIEEQRLYELTKLAAQLRGLLQDNNL 704
I + + + QL ++ NL
Sbjct: 575 FINNRAMKSADNVRQQLVRIMSRFNL 600
>At2g47250.1 68415.m05900 RNA helicase, putative similar to
SP|P53131 Pre-mRNA splicing factor RNA helicase PRP43
(Helicase JA1) {Saccharomyces cerevisiae}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 729
Score = 308 bits (755), Expect = 2e-83
Identities = 192/566 (33%), Positives = 313/566 (55%), Gaps = 44/566 (7%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---------I 212
+ ++LPV + + ++ + + + +I+ G+TG GK+TQ+PQ++ +A + +
Sbjct: 60 EKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLV 119
Query: 213 ACTQPRRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSS 271
CTQPRR+A +S+S+RVA EM +VGY IRFE +S T + ++T+G+LLR+ M+
Sbjct: 120 GCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMAD 179
Query: 272 ETLPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASES 331
L Y VIILDE HER L D L G+LK ++ R ++KLV+MSAT+ + F+EYF+
Sbjct: 180 PLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSG-- 237
Query: 332 AVVIQVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQI-MQLIDNKYPKDERGDLLIF 390
A +++VPGRL+ +E IF + P RD Y++ ++ + + + GD+L+F
Sbjct: 238 APLMKVPGRLHPVE-----IFYTQEPERD-------YLEAAIRTVVQIHMCEPPGDILVF 285
Query: 391 MSGVQEITAICDAAQQYAEKTKNWI----VLPLHSGLSLAEQDKVFDYPP----EGV--- 439
++G +EI C + + + V+PL+S L A Q K+FD P EG
Sbjct: 286 LTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAG 345
Query: 440 RKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAG 499
RK ++STNIAETS+TIDGI +V+D G K+ Y+P +++ L ISKASA QR GRAG
Sbjct: 346 RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAG 405
Query: 500 RTGPGVCYRIYSEQQY-TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEE 558
RT PG C+R+Y+E+ + D++P + PE+ R G++D+ F F+D P E
Sbjct: 406 RTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPE 465
Query: 559 SIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALT 618
++ AL L GAL LT G+ +S P++ ++K L++ + + + L+++
Sbjct: 466 TLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSP---EFNCSNEILSVS 522
Query: 619 AALGIRSIFTTRAHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEERGGRSWCKRR 678
A L + + F + A+ GD LTLL++Y A+ + +WC
Sbjct: 523 AMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAY----KQNNEDPNWCFEN 578
Query: 679 GIEEQRLYELTKLAAQLRGLLQDNNL 704
+ + + + QL ++ NL
Sbjct: 579 FVNNRAMKSADNVRQQLVRIMSRFNL 604
>At4g18465.1 68417.m02740 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 704
Score = 286 bits (702), Expect = 5e-77
Identities = 195/595 (32%), Positives = 315/595 (52%), Gaps = 54/595 (9%)
Query: 165 KELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN----IACTQPRRI 220
+ LPV YR EI+ V+N I+ G+TG GK+TQ+PQYL EAG+ IACTQPRR+
Sbjct: 46 QRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRL 105
Query: 221 ACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSD-TKICFITEGLLLRQMSSETL-PSYD 278
A ++S RVA EM +VGY IRFE TS T + F+T+G+L+R+M + L Y
Sbjct: 106 AVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYS 165
Query: 279 VIILDEIHERHLMGDFLLGILKCLVHTRT---------NIKLVLMSATINIKLFEEYFAS 329
VI++DE HER + D LLG+LK + + T ++L++ SATI K +F S
Sbjct: 166 VIMIDEAHERSISTDILLGLLKKVSQSNTVLIIQRRRPELRLIISSATIEAKTMSNFFNS 225
Query: 330 ESA---------------VVIQVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQL 374
++ V GR ++++++Y E P D + V + L
Sbjct: 226 SKKRHAPEGSTPGPKLEPAILSVEGRGFSVKIHYV-----EEPVSDYI---RSVVSTILL 277
Query: 375 IDNKYPKDERGDLLIFMSGVQEI-TAICDAAQQYAEKTKN---WIVLPLHSGLSLAEQDK 430
I+ + P GD+L+F++G ++I TAI ++ KN + LPL+SGLS +EQ+
Sbjct: 278 INEREPP---GDVLVFLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQEL 334
Query: 431 VFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKAS 490
+F P G RK I+STNIAETS+T++G+ +V+DSG K+ Y+P S ++ L ISKAS
Sbjct: 335 IFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKAS 394
Query: 491 ADQRKGRAGRTGPGVCYRIYSEQQYTDMEP-FSTPEVSRVPXXXXXXXXXXXGVNDVRRF 549
A QR GRAGR PG CYR+Y+E + + P PE+ R G++++ F
Sbjct: 395 ARQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGF 454
Query: 550 PFIDTPPEESIENALLELKQHGALTSNEKLTA-LGKALSNLPVEVSLAKALVIGSATLQT 608
+ P E++ AL L L + KLT+ G ++ LP++ ++K ++ S +
Sbjct: 455 DWPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCS 514
Query: 609 HKRDSALALTAALGIRSIFTTRAHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEE 668
H+ + + A L ++S++ + + A+ + GD +T L++Y +L E
Sbjct: 515 HE---IITIAAVLSVQSVWIIARGVQKEQDEAKLRFAAAEGDHVTFLNVYKGFL----ES 567
Query: 669 RGGRSWCKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHG 723
+ WC + + Q + ++ ++ QL+ + + ++ M + +A+ G
Sbjct: 568 KKPTQWCYKNFLNYQSMKKVVEIRDQLKRIARRLGITLKSCDGDMEAVRKAVTAG 622
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 285 bits (699), Expect = 1e-76
Identities = 185/526 (35%), Positives = 278/526 (52%), Gaps = 26/526 (4%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGF---QNIACTQP 217
R+ LP+ YR +I+ + E+++++ G+TG GKSTQ+ Q+L ++G ++I CTQP
Sbjct: 300 RRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQP 359
Query: 218 RRIACVSLSKRVAYEMLTQFESK-VGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETLP 275
R+IA ++L+ RV E +E V F ++ +K+ ++T+ LL+ M +L
Sbjct: 360 RKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLS 419
Query: 276 SYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVI 335
+I+DE HER L D LL +LK L+ R +++LV+MSAT + K +YF S ++
Sbjct: 420 GISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFS--CGIL 477
Query: 336 QVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYV-QIMQLIDNKYPKDERGDLLIFMSGV 394
V GR + +E+ Y P EE YV ++++ + ++ G +L F++
Sbjct: 478 LVNGRNFPVEIVYSPSDTEENSVVGGIAS---YVGDVVKMAVEIHKTEKEGTILAFLTSQ 534
Query: 395 QEITAICDAAQQYAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSVT 454
E+ C+ T + I LPLH LS EQ +VF P G RK I +TNIAETS+T
Sbjct: 535 AEVEWACERFI-----TPSAIALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLT 588
Query: 455 IDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQ 514
I G+++V+DSG VKE Y+P + M LK +S++SA QR GRAGRT PG CYR+YS+
Sbjct: 589 IPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKND 648
Query: 515 YTDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHGALT 574
+ M PE+ RV GVN++ F F+D P E+I A+ L Q GA+
Sbjct: 649 FDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVV 708
Query: 575 SN---EKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTRA 631
+LT G L L +E L K L++G + K LA A SIF
Sbjct: 709 EKNGVHELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGKEGIVLAAVMA-NASSIFCRVG 766
Query: 632 HRDFDCENARKPDE--SDHGDPLTLLSLYCAWLRVKAEERGGRSWC 675
+ D + R + + +GD TLLS+Y W + E R WC
Sbjct: 767 NFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERR--NKWC 810
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 272 bits (668), Expect = 7e-73
Identities = 180/525 (34%), Positives = 274/525 (52%), Gaps = 24/525 (4%)
Query: 161 RQTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGF---QNIACTQP 217
R+ LP+ YR +I+ + E+++++ G+TG GKSTQ+ Q+L ++G ++I CTQP
Sbjct: 297 RRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQP 356
Query: 218 RRIACVSLSKRVAYEMLTQFESK-VGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETLP 275
R+IA ++L+ RV E +E V F ++ +K+ ++T+ LL+ M +L
Sbjct: 357 RKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLS 416
Query: 276 SYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVI 335
+I+DE HER L D LL +L+ L+ R +++LV+MSAT + +Y ++
Sbjct: 417 GISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFD--CGIL 474
Query: 336 QVPGRLYTIELNYKPIFMEERPTRDDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQ 395
V GR + +E+ Y P EE V M + +K K+ G +L F++
Sbjct: 475 HVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKE--GTILAFLTSQA 532
Query: 396 EITAICDAAQQYAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSVTI 455
E+ C+ ++ + I LPLH LS EQ VF P G RK I +TNIAETS+TI
Sbjct: 533 EVEWACE---RFVAPSA--IALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTI 586
Query: 456 DGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQY 515
G+++V+DSG VKE Y+P + M LK +S++SA QR GRAGRT PG CYR+YS+ +
Sbjct: 587 PGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDF 646
Query: 516 TDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEESIENALLELKQHGALTS 575
M PE+ RV G++++ F F+D P E+I A+ L Q GA+
Sbjct: 647 DSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVE 706
Query: 576 NE---KLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTRAH 632
+LT G L L +E L K L++G + K LA A SIF +
Sbjct: 707 KNGVLELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGKEGIVLAAVMA-NASSIFCRVGN 764
Query: 633 RDFDCENARKPDE--SDHGDPLTLLSLYCAWLRVKAEERGGRSWC 675
D + R + +D+GD TLLS+Y W + + R WC
Sbjct: 765 FDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRR--NKWC 807
>At1g26370.1 68414.m03217 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 717
Score = 195 bits (475), Expect = 2e-49
Identities = 134/403 (33%), Positives = 203/403 (50%), Gaps = 31/403 (7%)
Query: 309 IKLVLMSATINIKLFEEYFASESAVVIQVPGRLYTIELNYKPIFMEERPTRDDRLDPQPY 368
+KL++MSA+++ ++F EYF AV +Q GR + +++ Y P D +D
Sbjct: 229 LKLIIMSASLDARVFSEYFGGAKAVHVQ--GRQFPVDILYTV-----HP-ESDYVDAT-L 279
Query: 369 VQIMQLIDNKYPKDERGDLLIFMSGVQEITAI----CDAAQQYAEKTKNWIVLPLHSGLS 424
V I Q+ + P GD+L+F++G EI ++ + Q E + + L + S L
Sbjct: 280 VTIFQIHFEEKP----GDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALP 335
Query: 425 LAEQDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEF 484
+Q KVF P G RK I++TNIAETS+TI GIR+V+D G VK SYDP+ M+ L
Sbjct: 336 SEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVV 395
Query: 485 WISKASADQRKGRAGRTGPGVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXGVN 544
SKA QR GRAGR GPG +R+Y E+++ +E + PE+ R G++
Sbjct: 396 PASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGID 455
Query: 545 DVRRFPFIDTPPEESIENALLELKQHGALTSNEKL-TALGKALSNLPVEVSLAKALVIGS 603
D+ F FID P +I AL EL GAL + KL +G +S LP+E +KAL++ +
Sbjct: 456 DIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILAN 515
Query: 604 ATLQTHKRDSALALTAALGIRSIFTTRAHRDFDCENARKPDESDHGDPLTLLSLY---CA 660
Q + + L A L + SIF + + ++ S GD LT LS+Y
Sbjct: 516 ---QFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDE 572
Query: 661 WLRVKAEERGG-------RSWCKRRGIEEQRLYELTKLAAQLR 696
+L + G + WCK + + L + Q+R
Sbjct: 573 FLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIR 615
Score = 128 bits (309), Expect = 2e-29
Identities = 65/148 (43%), Positives = 97/148 (65%), Gaps = 5/148 (3%)
Query: 165 KELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGF----QNIACTQPRRI 220
+ LP+A+ +V VQ ++I+ G+TG GK+TQ+PQ+L+ AGF + I TQPRRI
Sbjct: 39 RSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRI 98
Query: 221 ACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETLPSYDV 279
A V+++KRVA E Q KVGY IRF+ + + T++ ++T+GLLLR+ + L Y V
Sbjct: 99 AAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSV 158
Query: 280 IILDEIHERHLMGDFLLGILKCLVHTRT 307
II+DE H+R + D LL +LK + TR+
Sbjct: 159 IIVDEAHDRSVHTDVLLALLKKIQRTRS 186
>At1g48650.1 68414.m05445 helicase domain-containing protein
contains similarity to DEIH-box RNA/DNA helicase
[Arabidopsis thaliana] GI:5881579; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, PF00035:
Double-stranded RNA binding motif
Length = 1197
Score = 188 bits (457), Expect = 2e-47
Identities = 114/335 (34%), Positives = 173/335 (51%), Gaps = 10/335 (2%)
Query: 381 KDER-GDLLIFMSGVQEITAICDAAQQYA--EKTKNWIVLPLHSGLSLAEQDKVFDYPPE 437
K ER G +L+FM+G +I ++ + + ++ ++L H ++ +EQ +FD PPE
Sbjct: 574 KGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPE 633
Query: 438 GVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGR 497
G+RK +++TN+AETS+TI+ + +V+D GK KE SYD + L WISKA+A QR+GR
Sbjct: 634 GIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGR 693
Query: 498 AGRTGPGVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRF--PFIDTP 555
AGR PG CY +Y Y + PE+ R P G+ + F + P
Sbjct: 694 AGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPP 753
Query: 556 PEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSAL 615
S++NA+ LK GAL +E LT LGK LS LPVE L K L++G+ + D +
Sbjct: 754 EALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAI---FNCLDPVM 810
Query: 616 ALTAALGIRSIFTTRAHRDFDCENAR-KPDESDHGDPLTLLSLYCAWLRVKAEERGGRSW 674
+ A L +R F + E AR K D+ D LTL+ Y W + G +
Sbjct: 811 TVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGW-KDAERTHSGYDY 869
Query: 675 CKRRGIEEQRLYELTKLAAQLRGLLQDNNLSETPE 709
C + + Q L + + Q LL++ +L + E
Sbjct: 870 CWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIE 904
Score = 153 bits (370), Expect = 9e-37
Identities = 79/198 (39%), Positives = 125/198 (63%), Gaps = 10/198 (5%)
Query: 165 KELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQ-------NIACTQP 217
K LP + ++ A+ +VV+V+G+TGCGK+TQ+PQY+ E+ + +I CTQP
Sbjct: 297 KTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQP 356
Query: 218 RRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSE-TLPS 276
RRI+ +S+S+RVA E Q VGY++R E + DT++ F T G+LLR++ + +L
Sbjct: 357 RRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKG 416
Query: 277 YDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQ 336
+++DEIHER + DFLL +LK L+ R ++KL+LMSAT+N +LF YF A +
Sbjct: 417 VTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFG--GAPAMH 474
Query: 337 VPGRLYTIELNYKPIFME 354
+PG Y + ++ ++E
Sbjct: 475 IPGFTYPVRAHFLEDYLE 492
>At2g01130.1 68415.m00021 helicase domain-containing protein similar
to DEIH-box RNA/DNA helicase [Arabidopsis thaliana]
GI:5881579; contains Pfam profiles PF04408: Helicase
associated domain (HA2), PF00271: Helicase conserved
C-terminal domain
Length = 1112
Score = 184 bits (449), Expect = 2e-46
Identities = 114/335 (34%), Positives = 168/335 (50%), Gaps = 8/335 (2%)
Query: 374 LIDNKYPKDERGDLLIFMSGVQEITAICDAAQQYAEKTKNWIVLPL--HSGLSLAEQDKV 431
L+ N + G +LIF++G +I+++ + Q + +V+ L H + EQ +
Sbjct: 487 LLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLI 546
Query: 432 FDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASA 491
F+ P GVRK +++TNIAETS+TI+ + FV+D GK KE SYD + L WISK SA
Sbjct: 547 FEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSA 606
Query: 492 DQRKGRAGRTGPGVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRF-- 549
QR+GRAGR PG CY +Y + Y + PE+ R P + + F
Sbjct: 607 QQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLS 666
Query: 550 PFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTH 609
+ +P +++ A+ LK GAL NE LT LG+ LS LP+E L K L++G A L
Sbjct: 667 RALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILG-AILGC- 724
Query: 610 KRDSALALTAALGIRSIFTTRAHRDFDCENARKPDESDHGDPLTLLSLYCAWLRVKAEER 669
D L + A L +R F T + E A+ DH D L L+ Y W + + EE
Sbjct: 725 -LDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAE-EES 782
Query: 670 GGRSWCKRRGIEEQRLYELTKLAAQLRGLLQDNNL 704
+C + + Q L + L + LL+D L
Sbjct: 783 AVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGL 817
Score = 163 bits (395), Expect = 8e-40
Identities = 83/196 (42%), Positives = 125/196 (63%), Gaps = 10/196 (5%)
Query: 167 LPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEA-------GFQNIACTQPRR 219
LP RH +++A+ +V++++G+TGCGK+TQ+PQ++ E+ F +I CTQPRR
Sbjct: 219 LPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRR 278
Query: 220 IACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQ-MSSETLPSYD 278
I+ +S+S+RVAYE Q VGY++R E K DT++ F T G+LLR+ + L
Sbjct: 279 ISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVT 338
Query: 279 VIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQVP 338
+I+DEIHER + DFLL ILK L+ R+ +KL+LMSAT++ +LF YF A VI +P
Sbjct: 339 HVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFG--GAGVIYIP 396
Query: 339 GRLYTIELNYKPIFME 354
G Y + ++ +E
Sbjct: 397 GFTYPVRSHFLEDILE 412
>At2g35920.1 68415.m04409 helicase domain-containing protein similar
to DEIH-box RNA/DNA helicase [Arabidopsis thaliana]
GI:5881579; contains Pfam profiles PF04408: Helicase
associated domain (HA2), PF00271: Helicase conserved
C-terminal domain
Length = 995
Score = 184 bits (448), Expect = 3e-46
Identities = 116/333 (34%), Positives = 172/333 (51%), Gaps = 13/333 (3%)
Query: 385 GDLLIFMSGVQEITAICDAAQQ--YAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGVRKC 442
G +L+F++G EI+ + + + + ++VLPLH + Q ++FD PP RK
Sbjct: 504 GAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKI 563
Query: 443 IISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTG 502
+++TNIAE+S+TID + +VVD GK KE SYD +K+ L WISKASA QR+GRAGR
Sbjct: 564 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQ 623
Query: 503 PGVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRF--PFIDTPPEESI 560
GVCYR+Y + Y + PE+ R P V + F + P ++
Sbjct: 624 AGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAV 683
Query: 561 ENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSATLQTHKRDSALALTAA 620
ENA+ LK GAL E+LT LG+ L LPV+ ++ K L+IG A Q + AL + AA
Sbjct: 684 ENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIG-AIFQC--VNPALTIAAA 740
Query: 621 LGIRSIFTTRAHRDFDCENARKPDESDH-GDPLTLLSLYCAWLRVKAEERGG--RSWCKR 677
L RS F +R + + A++ D D + LL Y + K RGG + +C +
Sbjct: 741 LAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRDAK---RGGNEKDFCWQ 797
Query: 678 RGIEEQRLYELTKLAAQLRGLLQDNNLSETPEP 710
+ L + + Q LL D + +P
Sbjct: 798 NFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKP 830
Score = 142 bits (344), Expect = 1e-33
Identities = 74/201 (36%), Positives = 124/201 (61%), Gaps = 11/201 (5%)
Query: 165 KELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQ-------NIACTQP 217
++LP + E +++V +V++V+G+TGCGK+TQ+PQ++ E NI CTQP
Sbjct: 226 EKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQP 285
Query: 218 RRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSE-TLPS 276
RRI+ +S++ R++ E VGYQIR E ++ T++ F T G+LLR++ + L +
Sbjct: 286 RRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTN 345
Query: 277 YDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVIQ 336
+++DEIHER + DFLL IL+ L+ R +++L+LMSATIN +F YF ++ +
Sbjct: 346 VSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFG--NSPTMH 403
Query: 337 VPGRLYTI-ELNYKPIFMEER 356
+PG + + EL + + + R
Sbjct: 404 IPGFTFPVAELFLEDVLEKSR 424
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 182 bits (444), Expect = 9e-46
Identities = 114/339 (33%), Positives = 177/339 (52%), Gaps = 14/339 (4%)
Query: 371 IMQLIDNKYPKDERGDLLIFMSGVQEITAICDAA--QQYAEKTKNWIVLPLHSGLSLAEQ 428
I++L+ + G +L+F+ G +EI+ + ++ + +I+L LHS + EQ
Sbjct: 562 IVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQ 621
Query: 429 DKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISK 488
KVF+ PP G RK +++TNIAE++VTID + +V+DSG++KE SYDP + + L+ W+SK
Sbjct: 622 KKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSK 681
Query: 489 ASADQRKGRAGRTGPGVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXGVN-DVR 547
A+A QR GRAGR G+CY +YS+ + + + PEV R+P N +V
Sbjct: 682 ANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVN 741
Query: 548 RF--PFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSAT 605
F +D P +SIENAL+ LK GALT E+LT LG+ LPV ++K +
Sbjct: 742 DFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYF---A 798
Query: 606 LQTHKRDSALALTAALGIRSIFTTRAHRDFDCENARKPDE-----SDHGDPLTLLSLYCA 660
+ + D AL L A + FT + A E DH D L ++ +
Sbjct: 799 ILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQC 858
Query: 661 WLRVKAEERGGRSWCKRRGIEEQRLYELTKLAAQLRGLL 699
W KA + + +C + I + + L L +L+G L
Sbjct: 859 WKNAKASGQ-AKEFCSKYFISQVVMKRLDDLCRKLQGEL 896
Score = 149 bits (362), Expect = 8e-36
Identities = 76/193 (39%), Positives = 124/193 (64%), Gaps = 12/193 (6%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN------IACT 215
+ +LP+A++R I+SAV++ +VV++AG+TGCGK+TQVPQYL + + + I CT
Sbjct: 212 EARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICT 271
Query: 216 QPRRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQM----SS 271
QPRRI+ +S+S R+++E VGY++R + ++ + F T G+LLR + +
Sbjct: 272 QPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVN 331
Query: 272 ETLPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASES 331
++P II+DEIHER DF+L IL+ L+ + +++L+LMSAT++ + F EYF
Sbjct: 332 SSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFG--G 389
Query: 332 AVVIQVPGRLYTI 344
V++VPG Y +
Sbjct: 390 CPVVRVPGFTYPV 402
>At1g58060.1 68414.m06580 helicase domain-containing protein contains
similarity to SP|P24785 Dosage compensation regulator
(Male-less protein) (No action potential protein)
{Drosophila melanogaster}; contains Pfam profiles
PF04408: Helicase associated domain (HA2), PF00271:
Helicase conserved C-terminal domain
Length = 1459
Score = 181 bits (441), Expect = 2e-45
Identities = 118/380 (31%), Positives = 198/380 (52%), Gaps = 28/380 (7%)
Query: 360 DDRLDPQPYVQIMQLIDNKYPKDERGDLLIFMSGVQEITAICD---AAQQYAEKTKNWIV 416
+DR+D + +++ ID+ E G +LIF+ GV EI + D A+ ++ +W+
Sbjct: 894 EDRIDYELLEELICHIDDTC---EEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL- 949
Query: 417 LPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTS 476
LPLHS ++ +EQ KVF PP+G+RK I +TNIAETS+TID + +V+DSGK KE Y+P
Sbjct: 950 LPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQK 1009
Query: 477 KMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQYTD-MEPFSTPEVSRVPXXXXX 535
K+ + E WIS+A+A QR GRAGR PG+C+ +Y+ ++ M P+ PE+ R+P
Sbjct: 1010 KLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELC 1069
Query: 536 XXXXXXGVNDVRRF--PFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEV 593
G+ ++ F ++ P E ++ +A+ L + GA+ +E+LT LG L+ LPV+V
Sbjct: 1070 LQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDV 1129
Query: 594 SLAKALVIGSATLQTHKRDSALALTAALGIRSIFTTRAHRDFDCENARKPDESDHG---- 649
+ K L+ G L++ A L +S F + + + SD+G
Sbjct: 1130 LIGKMLLYGGI---FGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSS 1186
Query: 650 ---------DPLTLLSLYCAWLRVKAEE--RGGRSWCKRRGIEEQRLYELTKLAAQLRGL 698
D L ++ Y W+++ E + + +C+ + + + + + Q L
Sbjct: 1187 DLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTL 1246
Query: 699 LQDNNLSETPEPETMSSAER 718
L D L P+ S ++
Sbjct: 1247 LADIGLINLPKTGEFSGRKK 1266
Score = 144 bits (348), Expect = 4e-34
Identities = 90/263 (34%), Positives = 148/263 (56%), Gaps = 26/263 (9%)
Query: 110 NFTSSMKFIDTVCES----GSRKKLNRKIFDAFLEI--VSIYLDXXXXXXXXXXXXXRQT 163
+F +S+ +D+ + G K NR D+++E +S+ +T
Sbjct: 551 SFENSLPLVDSYVKDKDDLGVVKSNNRAKRDSYIEAECLSLQRKQENKKRTQKYKDMLKT 610
Query: 164 HKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHE-------AGFQNIACTQ 216
LP++ ++ I+ ++ + V++V G+TG GK+TQVPQ++ + G+ NI CTQ
Sbjct: 611 RTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQ 670
Query: 217 PRRIACVSLSKRVAYEMLTQF----ESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSE 272
PRRIA +S+++RVA E +S VGYQ+R E +++ T++ F T G+LLR+++ +
Sbjct: 671 PRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGD 730
Query: 273 -TLPSYDVIILDEIHERHLMGDFLLGILKCLV------HTRTNIKLVLMSATINIKLFEE 325
TL II+DE+HER L+GDFLL ILK L+ +T +K++LMSAT++ LF
Sbjct: 731 RTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSR 790
Query: 326 YFASESAVVIQVPGRLYTIELNY 348
YF VI GR + + ++
Sbjct: 791 YFG--HCPVITAQGRTHPVTTHF 811
>At1g58050.1 68414.m06579 helicase domain-containing protein contains
similarity to SP|P24785 Dosage compensation regulator
(Male-less protein) (No action potential protein)
{Drosophila melanogaster}; contains Pfam profiles
PF04408: Helicase associated domain (HA2), PF00271:
Helicase conserved C-terminal domain
Length = 1417
Score = 180 bits (438), Expect = 5e-45
Identities = 92/226 (40%), Positives = 142/226 (62%), Gaps = 7/226 (3%)
Query: 383 ERGDLLIFMSGVQEITAICD---AAQQYAEKTKNWIVLPLHSGLSLAEQDKVFDYPPEGV 439
E G +L+F+ G+ EI + + A+ ++ + +W+ LPLHS ++ EQ KVF PP+G+
Sbjct: 881 EEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWL-LPLHSSIASTEQKKVFLRPPKGI 939
Query: 440 RKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAG 499
RK II+TNIAETS+TI+ + +V+DSGK KE Y+P K+ + E W+SKA+A QR GRAG
Sbjct: 940 RKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAG 999
Query: 500 RTGPGVCYRIYSEQQYTD-MEPFSTPEVSRVPXXXXXXXXXXXGVNDVRRF--PFIDTPP 556
R PG C+ +Y+ ++ M P+ PE+ RVP G+ ++ F ++ P
Sbjct: 1000 RVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPS 1059
Query: 557 EESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIG 602
E +I +A+L L + GAL +E+LT LG L+ LPV++ + K L+ G
Sbjct: 1060 ESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYG 1105
Score = 122 bits (295), Expect = 1e-27
Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 23/201 (11%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHE-------AGFQNIAC 214
+T LP++ + +I+ ++ + V++V G+TG GK+TQVPQ++ + G+ NI C
Sbjct: 592 KTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIIC 651
Query: 215 TQPRRIACVSLSKRVAYEMLTQ---FE-SKVGYQIRFEKSKTSDTKICFITEGLLLRQMS 270
TQPR I ++++RVA E F+ S V YQ+R + +++ T++ F T G+LLR++
Sbjct: 652 TQPRAI---TVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLV 708
Query: 271 SET-LPSYDVIILDEIHERHLMGDFLLGILKCLVHTRT------NIKLVLMSATINIKLF 323
+T L II+DE+HER LMGDFLL ILK L+ ++ +K++LMSAT++ F
Sbjct: 709 GDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQF 768
Query: 324 EEYFASESAVVIQVPGRLYTI 344
YF +I GR + +
Sbjct: 769 SRYFG--QCPIITAQGRTHPV 787
>At2g30800.1 68415.m03755 DEIH-box RNA/DNA helicase, putative
similar to DEIH-box RNA/DNA helicase [Arabidopsis
thaliana] GI:5881579; contains Pfam profiles PF04408:
Helicase associated domain (HA2), PF00271: Helicase
conserved C-terminal domain
Length = 1299
Score = 169 bits (412), Expect = 7e-42
Identities = 99/264 (37%), Positives = 145/264 (54%), Gaps = 10/264 (3%)
Query: 371 IMQLIDNKYPKDERGDLLIFMSGVQEITAICDAAQQ---YAEKTKNWIVLPLHSGLSLAE 427
I QL+ E G +L+F+ G +I + +A+ K + ++ LHS + E
Sbjct: 538 IQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAK-FDIICLHSMVPAGE 596
Query: 428 QDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWIS 487
Q KVF+ PP G RK +++TNIAE++VTID + +V+DSG++KE SYDP + + L+ W+S
Sbjct: 597 QKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVS 656
Query: 488 KASADQRKGRAGRTGPGVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXGVN-DV 546
KA+A QR+GRAGR PG+CY +YS + M F PE+ R+P N
Sbjct: 657 KANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKT 716
Query: 547 RRF--PFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIGSA 604
F +D P ++SI NAL L+ GALT E+LT LG+ +LPV ++K L
Sbjct: 717 NDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFF--- 773
Query: 605 TLQTHKRDSALALTAALGIRSIFT 628
+ + D AL L A + FT
Sbjct: 774 AVLVNCLDPALTLACAADYKEPFT 797
Score = 138 bits (335), Expect = 2e-32
Identities = 70/193 (36%), Positives = 119/193 (61%), Gaps = 12/193 (6%)
Query: 166 ELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN------IACTQPRR 219
+LP+ +++ I SAV++ +V++++G+TGCGK+TQVPQYL + + + I CTQPRR
Sbjct: 186 KLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRR 245
Query: 220 IACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQM----SSETLP 275
I+ +S+S+R++ E +GY++R + + + F T G+LLR + S ++
Sbjct: 246 ISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVS 305
Query: 276 SYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYFASESAVVI 335
II+DEIHER DF+L I++ L+ + +++L+LMSAT++ + F YF V+
Sbjct: 306 DITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFG--GCPVV 363
Query: 336 QVPGRLYTIELNY 348
+VPG Y + Y
Sbjct: 364 RVPGFTYPVRTLY 376
>At5g04895.1 68418.m00514 helicase domain-containing protein similar
to DEIH-box RNA/DNA helicase [Arabidopsis thaliana]
GI:5881579;contains Pfam profiles PF04408: Helicase
associated domain (HA2), PF00271: Helicase conserved
C-terminal domain, PF00035: Double-stranded RNA binding
motif
Length = 581
Score = 152 bits (369), Expect = 1e-36
Identities = 96/287 (33%), Positives = 143/287 (49%), Gaps = 11/287 (3%)
Query: 423 LSLAEQDKVFDYPPEGVRKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLK 482
++ AEQ +F+ P +RK +++TN+AE S+TI+ + FVVD GK KE +YD + L
Sbjct: 1 MATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLL 60
Query: 483 EFWISKASADQRKGRAGRTGPGVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXXXXXXG 542
WIS+ASA QR+GRAGR PG CY +Y + Y + PE+ R P
Sbjct: 61 PSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQ 120
Query: 543 VNDVRRF--PFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALV 600
V + F + P +++NA+ LK GAL E LT LGK LS LPV+ L K L+
Sbjct: 121 VESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLI 180
Query: 601 IGSATLQTHKRDSALALTAALGIRSIF-TTRAHRDFDCENARKPDESDHGDPLTLLSLYC 659
+G A + D L + + L +R F + +D + D+ D + L+ +
Sbjct: 181 MG-AIFRCF--DPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFE 237
Query: 660 AWLRVKAEERGGRSW--CKRRGIEEQRLYELTKLAAQLRGLLQDNNL 704
W K ER G ++ C R + Q L + L Q +L++ L
Sbjct: 238 GW---KDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGL 281
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 150 bits (363), Expect = 6e-36
Identities = 90/206 (43%), Positives = 124/206 (60%), Gaps = 9/206 (4%)
Query: 403 AAQQYAEKTKNWI------VLPLHSGLSLAEQDKVFDYPPEGVRKCIISTNIAETSVTID 456
A Q AE+ KN VLPL++ LS A Q +VF+ + R +++TN+AETS+TI
Sbjct: 630 AENQEAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIP 689
Query: 457 GIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSEQQYT 516
GI++VVD+G+VK +YD + M+ + WIS+ASA QR GRAGRTGPG CYR+YS ++
Sbjct: 690 GIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFS 749
Query: 517 DM-EPFSTPEVSRVPXXXXXXXXXXXGVNDVRRFPFIDTPPEES-IENALLELKQHGALT 574
++ E S PE+ +VP + V FPF TPPE S I A LK AL
Sbjct: 750 NIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPF-PTPPEPSAIREAERCLKALEALD 808
Query: 575 SNEKLTALGKALSNLPVEVSLAKALV 600
SN LT LGKA+S+ P+ ++ L+
Sbjct: 809 SNGGLTPLGKAMSHYPMSPRHSRMLL 834
Score = 141 bits (342), Expect = 2e-33
Identities = 92/284 (32%), Positives = 158/284 (55%), Gaps = 45/284 (15%)
Query: 162 QTHKELPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQN---------I 212
+T K+LP+ EI+ A+ VI++G TGCGK+TQVPQ+L+EAGF + I
Sbjct: 236 ETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGII 295
Query: 213 ACTQPRRIACVSLSKRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSE 272
TQPRR+A ++ +KRVA+E+ + +VG+Q+R++K ++ I F+T+G+LLR++ ++
Sbjct: 296 GITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQND 355
Query: 273 -TLPSYDVIILDEIHERHLMGDFLLGILKCLVHTR-----------------------TN 308
L Y VIILDE HER L D L+G+L ++ R T
Sbjct: 356 FLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITP 415
Query: 309 IKLVLMSATINIKLF--EEYFASESAVVIQVPGRLYTIELNYKPIFMEERPTRDDRLDPQ 366
+KL+LMSAT+ ++ F + +I+VP R Y + +++ + T +
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHF------SKKTEIVDYIGE 469
Query: 367 PYVQIMQLIDNKYPKDERGDLLIFMSGVQEITAICDAAQQYAEK 410
Y ++M I K P +G +L+F++G +E+ +C+ ++ +++
Sbjct: 470 AYKKVMS-IHKKLP---QGGILVFVTGQREVDYLCEKLRKSSKE 509
>At2g47680.1 68415.m05955 zinc finger (CCCH type) helicase family
protein similar to SP|Q28141 ATP-dependent RNA helicase
A (Nuclear DNA helicase II) (DEAD-box protein 9) {Bos
taurus}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 1015
Score = 130 bits (313), Expect = 7e-30
Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 2/163 (1%)
Query: 167 LPVANYRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACVSLS 226
LP+ + I+ + RV ++ G+ GCGKS+QVPQ+L EA I CTQPRR A V+++
Sbjct: 26 LPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAPILCTQPRRFAVVAVA 85
Query: 227 KRVAYEMLTQFESKVGYQIRFEKSKTSDTKICFITEGLLLRQMSSETLPS--YDVIILDE 284
K VA + ++GY I K T +KI F T G+LL +M + L + Y VIILDE
Sbjct: 86 KMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEMLDKGLNALKYKVIILDE 145
Query: 285 IHERHLMGDFLLGILKCLVHTRTNIKLVLMSATINIKLFEEYF 327
+HER + D +L +K + ++++VLMSAT +I + +YF
Sbjct: 146 VHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYF 188
Score = 78.2 bits (184), Expect = 3e-14
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 440 RKCIISTNIAETSVTIDGIRFVVDSGKVKEMSYDPTSKMQRLKEFWISKASADQRKGRAG 499
RK I++TNIAE+SVTI + +V+DS + ++ +DP+ K ++ W+S++ A+QR+GR G
Sbjct: 322 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRTG 381
Query: 500 RTGPGVCYRIYSEQQYTDMEPFSTPEVSRVPXXXXXXX---XXXXGVNDVRRF--PFIDT 554
RT G YR+ + +E P + ++ +ND +D
Sbjct: 382 RTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAKAMDP 441
Query: 555 PPEESIENALLELKQHGALTSNEK----LTALGKALSNLPVEVSLAKALVI 601
P + +++AL L AL + + T G+ L++ P+ A LV+
Sbjct: 442 PDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPLSFD-ASILVV 491
>At5g14900.1 68418.m01748 helicase associated (HA2)
domain-containing protein similar to SP|P53131 Pre-mRNA
splicing factor RNA helicase PRP43 (Helicase JA1)
{Saccharomyces cerevisiae}; contains Pfam profile
PF04408: Helicase associated domain (HA2)
Length = 301
Score = 57.2 bits (132), Expect = 6e-08
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 543 VNDVRRFPFIDTPPEESIENALLELKQHGALTSNEKLTALGKALSNLPVEVSLAKALVIG 602
V ++ RF ID+P +++ AL +L GAL + LT G+ +S P++ +AK L++
Sbjct: 16 VKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSEFPLDPQMAKMLIVS 75
Query: 603 SATLQTHKRDSALALTAALGIRSIF-TTRAHRDFDCENARKPDESDHGDPLTLLSLYCAW 661
Q + + L+++A L + + F R + A+ GD LTLL+L+ A+
Sbjct: 76 P---QFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGDHLTLLNLFHAF 132
Query: 662 LRVKAEERGGRSWCKRRGIEEQRLYELTKLAAQL 695
L+ + +WC + I + + + QL
Sbjct: 133 LQNNQDP----NWCCTKFINYRAMKSAVSVREQL 162
>At5g38680.1 68418.m04677 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 357
Score = 34.3 bits (75), Expect = 0.48
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 928 WLLLEFPYPETGLNLLMKAVRLRRRWNDLVNRRLADANPAKTVESELEKQKHS-KSSYEE 986
W + PY ET N+ K++ + +W R++ NP K + +E + S KSSY+
Sbjct: 205 WDHVPIPYNETKHNIYSKSLCIDEKWYVGAKRKVVSYNPKKGIWDLVESEMCSYKSSYDY 264
Query: 987 TQYE 990
+ E
Sbjct: 265 CEIE 268
>At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative similar
to CAF protein [Arabidopsis thaliana] GI:6102610;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF03368:
Domain of unknown function, PF00636: RNase3 domain,
PF00035: Double-stranded RNA binding motif
Length = 1676
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 172 YRHEIVSAVQNERVVIVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACVSLSKRVA 230
Y+ E+ E V++ G TGCGK+ ++E G ++ P++ C+ L+ VA
Sbjct: 127 YQVELCKKATEENVIVYLG-TGCGKTHIAVMLIYELGHLVLS---PKKSVCIFLAPTVA 181
>At5g10500.1 68418.m01216 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 848
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 687 ELTKLAAQLRGLLQDNNLSETPEPETMSSAERALRHGQMKQLKDMRRQYKQKSAEDSKRK 746
E+ L AQ+R L ++NN S+T + M + + ++ +KD+ ++ ++KS K
Sbjct: 366 EIDDLKAQIRALQKENNSSQTDDNMDMGKKLKEMEE-KVNGVKDIDQEVEEKSDNIDKHL 424
Query: 747 KR 748
R
Sbjct: 425 TR 426
>At4g17220.1 68417.m02590 expressed protein
Length = 513
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 717 ERALRHGQMKQLKDMRRQYKQKSAEDSKRKKRLKI 751
ER + HG+M++LKD ++ + +S+ K+RLK+
Sbjct: 281 ERRILHGEMQKLKDKLAVSERTAKAESQLKERLKL 315
>At2g06690.1 68415.m00747 hypothetical protein includes At2g06610,
At5g28266, At3g42620, At4g07696, At2g06690, At2g16160,
At2g05480, At2g12140, At1g45080, At2g16330
Length = 253
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 254 DTKICFITEGLLLRQMSSETLPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVL 313
D +ICF+ + ++ + + +P YD I D I E+ + L+ ++ L+ N+
Sbjct: 95 DYRICFMDQTIVTKVLGLAAIPYYDFIPFDYIVEKTVSTGVLVDVIGALLEV-GNLTEDY 153
Query: 314 MSATINIKLFEEY 326
+ K+ ++Y
Sbjct: 154 RGLKLPFKIMDQY 166
>At2g06610.1 68415.m00733 hypothetical protein includes At2g06610,
At5g28266, At3g42620, At4g07696, At2g06690, At2g16160,
At2g05480, At2g12140, At1g45080, At2g16330
Length = 189
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 254 DTKICFITEGLLLRQMSSETLPSYDVIILDEIHERHLMGDFLLGILKCLVHTRTNIKLVL 313
D +ICF+ + ++ + + +P YD I D I E+ + L+ ++ L+ N+
Sbjct: 47 DYRICFMDQTIVTKVLGLAAIPYYDFIPFDYIVEKTVSTGVLVDVIGALLEV-GNLTEDY 105
Query: 314 MSATINIKLFEEY 326
+ K+ ++Y
Sbjct: 106 RGLKLPFKIMDQY 118
>At2g31160.1 68415.m03804 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 219
Score = 30.3 bits (65), Expect = 7.8
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 662 LRVKAEERGGRSWCKRRGIEEQRLY--ELTKLAAQLRGLLQDNNLSETPEPETMSSAERA 719
LR EE GG+ G RLY E+ + ++ RG+ + + P P + +S+ A
Sbjct: 137 LRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRPLPSSSTSSSSA 196
Query: 720 LRHGQMKQL 728
+ Q Q+
Sbjct: 197 VASHQQFQM 205
>At2g05480.1 68415.m00580 hypothetical protein includes At2g06610,
At5g28266, At3g42620, At4g07696, At2g06690, At2g16160,
At2g05480, At2g12140, At1g45080, At2g16330; contains a
non-consensus TA acceptor splice site. This may be a
pseudogene.
Length = 237
Score = 30.3 bits (65), Expect = 7.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 254 DTKICFITEGLLLRQMSSETLPSYDVIILDEIHERHLMGDFLLGILKCLV 303
D +ICF+ + ++ + +P YD D I ER + L+G + L+
Sbjct: 95 DYRICFMDQTIVTKVSGLPAIPYYDFTPFDYIIERTVSTGVLVGFIGALI 144
>At1g58602.1 68414.m06655 disease resistance protein (CC-NBS-LRR
class), putative similar to diesease resistance protein
rpp8 [Arabidopsis thaliana] gi|3901294|gb|AAC78631
Length = 1138
Score = 30.3 bits (65), Expect = 7.8
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 182 NERVVIVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACVSLSKRVAYEMLTQFESKV 241
N +VV + G G GK+T Q + ++ + ++A VS+S+ + + +++ +
Sbjct: 181 NYQVVSITGMGGLGKTTLARQVFNH----DMVTKKFDKLAWVSVSQD--FTLKNVWQNIL 234
Query: 242 G-YQIRFEKSKTSDTKICFITEGLLLRQMSSETLPSYDVIILDEIHER 288
G + + E++K + KI +TE L R++ S +I+LD+I ++
Sbjct: 235 GDLKPKEEETKEEEKKILEMTEYTLQRELYQLLEMSKSLIVLDDIWKK 282
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,154,192
Number of Sequences: 28952
Number of extensions: 1089305
Number of successful extensions: 2937
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2775
Number of HSP's gapped (non-prelim): 61
length of query: 1153
length of database: 12,070,560
effective HSP length: 89
effective length of query: 1064
effective length of database: 9,493,832
effective search space: 10101437248
effective search space used: 10101437248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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