GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001571-TA|BGIBMGA001571-PA|IPR012336|Thioredoxin-like
fold
         (114 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.00 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   3.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   7.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   9.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 1.00
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 44  EFKKKNPMRTIPILE-EGDFYLADRYPKLSKWINRMNDKEYCRKINTPGSELHVAGLIAL 102
           EF K   + T  +    G   ++   P LSK+++ +N   Y  + +  G   H +GL   
Sbjct: 167 EFDKNGLILTAAVAAASGSVDISYDVPALSKYLDIINVMAYDLRGSWDGVTGHHSGLYPS 226

Query: 103 MDNTKHNQQ 111
             +T  NQ+
Sbjct: 227 AVDTTTNQK 235


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 8   TDASPPARAVMMIVDILGLKVDEQEL-NPILRQQDTPEFK 46
           T+ +PP      I+    L VD+  L +P L   D  EFK
Sbjct: 143 TNPTPPPHYTYQIIPYEALNVDDHILSDPSLMDADL-EFK 181


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 49  NPMRTIPILEEGDFYLADRYPK 70
           +P     +LE  DFY   R PK
Sbjct: 235 SPNLEFVVLEAFDFYTPARNPK 256


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 9.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 68  YPKLSKWINRMNDKEY 83
           YP   K   +++DKEY
Sbjct: 299 YPGAEKMGGQLSDKEY 314


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.135    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,152
Number of Sequences: 317
Number of extensions: 1158
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 114
length of database: 114,650
effective HSP length: 49
effective length of query: 65
effective length of database: 99,117
effective search space:  6442605
effective search space used:  6442605
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)