Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001571-TA|BGIBMGA001571-PA|IPR012336|Thioredoxin-like
fold
(114 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 45 1e-05
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 43 7e-05
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 40 4e-04
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 39 8e-04
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 36 0.008
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 36 0.008
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 33 0.072
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 33 0.072
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 32 0.095
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 32 0.12
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 30 0.50
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 29 0.67
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 29 0.88
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 29 0.88
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 28 1.5
09_04_0167 + 15290059-15290188,15290779-15292070 27 3.6
09_02_0531 + 10312743-10313293,10314313-10315030 27 3.6
04_03_1007 - 21670780-21671368,21671477-21671685 27 3.6
09_04_0532 + 18386593-18386722,18386826-18386900,18387098-183875... 27 4.7
01_04_0031 + 15271193-15271342,15272134-15272182,15272894-15273294 27 4.7
11_01_0390 + 2944302-2944400,2945026-2945265,2945809-2946007,294... 26 6.2
07_03_0135 + 14070212-14070311,14072207-14072968,14082526-140826... 26 8.2
06_01_0864 + 6567619-6567729,6567984-6568136 26 8.2
02_03_0256 - 16917212-16917256,16917845-16917879,16918396-169184... 26 8.2
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 26 8.2
>11_06_0225 +
21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 45.2 bits (102), Expect = 1e-05
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MTPIL--YKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILE 58
M P+L Y S P+RA+++ + + +E ++ R+ +PEFKK NPM +P +
Sbjct: 1 MQPLLKVYADRRSQPSRAIIIFCRVNRIDFEEVTVDLFKREHLSPEFKKINPMGQVPAIV 60
Query: 59 EGDFYLADRY 68
+G F L +R+
Sbjct: 61 DGRFRLFERF 70
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 42.7 bits (96), Expect = 7e-05
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 5 LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEGDFYL 64
LY S + V + +++ GL+ + + +N + + PEF K NPM+ +P L +GD +
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPEFMKVNPMKFVPALVDGDAVI 75
Query: 65 ADRY 68
D Y
Sbjct: 76 GDSY 79
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 5 LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEGD 61
LY S + V + + + GL + + +N + +Q PEF+K NPM+ +P L +GD
Sbjct: 28 LYSFWRSSCSYRVRIALSLKGLDYEYKPINLLANEQSHPEFEKLNPMKYVPALVDGD 84
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 39.1 bits (87), Expect = 8e-04
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 3 PILYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEGDF 62
PILY S + + +++++ G+ + + +NP + P+++K NP++ IP L +GD
Sbjct: 6 PILYGAWISSCSHRIRIVLNLKGVDYEYKSVNP----RTDPDYEKINPIKYIPALVDGDL 61
Query: 63 YLAD 66
++D
Sbjct: 62 VVSD 65
>01_04_0045 +
15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 5 LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEGDFYL 64
+Y S V++ ++ G + + ++ + + +PE +NP +P L++GD L
Sbjct: 5 VYGLPMSTNVARVLVCLEEAGEQYEVVPIDFSIAEHKSPEHTSRNPFGQVPALQDGDLIL 64
Query: 65 ADRYPKLSKWINRMNDKEYCRKIN 88
+ +SK++ R N+ E ++ N
Sbjct: 65 FES-RAISKYVLRKNNSELLKEHN 87
>01_04_0030 -
15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MTPI-LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEE 59
MTP+ ++ S V++ ++ +G + + ++ + + +PE K+NP IP ++
Sbjct: 1 MTPVKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQD 60
Query: 60 GDFYL 64
GD YL
Sbjct: 61 GDLYL 65
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 32.7 bits (71), Expect = 0.072
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 3 PILYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEGDF 62
P+LY S + V + +++ G+ + E + R P++ K NP++ +P L +GDF
Sbjct: 9 PVLYSEWMSSCSYRVRIALNLKGI---DYEYRAVTRGD--PDYGKINPIKYVPALVDGDF 63
Query: 63 YLAD 66
++D
Sbjct: 64 TISD 67
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 32.7 bits (71), Expect = 0.072
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 4 ILYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEGD 61
+L+ D + A ++ + G+KV+ + + TPE+ K NP+ +PILE D
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPD 622
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 1 MTPILYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEG 60
M +L+ + A ++ + G+KV+ + + TPEF K NP+ IP+LE
Sbjct: 1 MALVLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETP 60
Query: 61 D 61
D
Sbjct: 61 D 61
>01_04_0025 -
15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 32.3 bits (70), Expect = 0.095
Identities = 19/78 (24%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 1 MTPI-LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEE 59
M+P+ ++ S V++ ++ +G + ++ + +Q++PE ++NP IP L++
Sbjct: 1 MSPVKVFGRAISTNVSRVLVCLEEVGADYELVTVDFLAGEQNSPEHVERNPFGKIPALQD 60
Query: 60 GDFYLADRYPKLSKWINR 77
GD L + ++K+I R
Sbjct: 61 GDLVLFES-RAIAKYILR 77
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 31.9 bits (69), Expect = 0.12
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 1 MTPILYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILE-- 58
M +L+ + A ++ + G+KV+ + + TPEF K NP+ IP+LE
Sbjct: 25 MALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETP 84
Query: 59 EGDFYLADRYPKLSKWINRMND 80
EG + ++ +++++ R+ D
Sbjct: 85 EGAVFESN---AIARYVARLKD 103
>07_01_0454 +
3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 29.9 bits (64), Expect = 0.50
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 43 PEFKKKNPMRTIPILEE--GDFYLADRYPKLSKWINRMNDKEYCRKINTPGSELHVAGLI 100
P F+ + M EE +F + ++ + W R N + TP E H G +
Sbjct: 651 PSFRIQKQMPFTQFKEEVAKEFGIPTQFQRFWLWAKRQNHTYRPNRPLTPQEETHTVGQL 710
Query: 101 ALMDNTKHNQQSKL 114
N HN + KL
Sbjct: 711 KEAANKAHNAELKL 724
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 29.5 bits (63), Expect = 0.67
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 1 MTPI-LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEE 59
M P+ +Y SP V++ ++ G + + ++ PE +NP IP+LE+
Sbjct: 1 MAPMKVYGWVVSPWMARVLVALEEAGAEYEVVPMSRSGGDHRRPEHLARNPFGEIPVLED 60
Query: 60 GDFYL 64
GD L
Sbjct: 61 GDLTL 65
>01_06_0810 -
32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 29.1 bits (62), Expect = 0.88
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 1 MTPI-LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEE 59
M P+ LY + S + +++ G + + L+ + P+ +NP +P L++
Sbjct: 1 MAPMKLYGSTLSWNVTRCVAVLEEAGAEYEIVPLDFSKGEHKAPDHLARNPFGQVPALQD 60
Query: 60 GDFYLADRYPKLSKWINRMNDKE 82
GD +L + + K++ R N E
Sbjct: 61 GDLFLWES-RAICKYVCRKNKPE 82
>01_04_0032 +
15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 29.1 bits (62), Expect = 0.88
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 5 LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEGDFYL 64
+Y S +++ ++ +G + + ++ + P +NP +P E+GD L
Sbjct: 6 VYGPAMSTNVMRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFEDGDLTL 65
Query: 65 ADRYPKLSKWINRMNDKEYCRKINTPGSEL 94
+ +SK+I R + + R+ N S +
Sbjct: 66 FES-RAISKYILRKHGSDLLRESNLSESAM 94
>01_04_0029 -
15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MTPI-LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEE 59
M P+ ++ S V++ ++ +G++ + ++ + +PE K+NP +P ++
Sbjct: 1 MAPVKVFGPAMSTNVARVLVCLEEVGVEYELVNIDFKAMEHKSPEHLKRNPFGQMPAFQD 60
Query: 60 GDFYL 64
GD L
Sbjct: 61 GDLLL 65
>09_04_0167 + 15290059-15290188,15290779-15292070
Length = 473
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 2 TPILYKTDASPPARAVMMIVDILGLKVDEQEL 33
TPI+Y T S P + V++ G+ + QE+
Sbjct: 306 TPIVYTTMVSDPVQGPFYFVNLTGITIGGQEV 337
>09_02_0531 + 10312743-10313293,10314313-10315030
Length = 422
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 1 MTPILYKTDASPPARAVMMIVDILGL 26
++P +YK+ ASPP R V + VD G+
Sbjct: 369 LSPQMYKSKASPPPRDVAVGVDYGGV 394
>04_03_1007 - 21670780-21671368,21671477-21671685
Length = 265
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 5 LYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEG 60
LY S ++ V M ++ G+ +NP+ + F + NP +P+ + G
Sbjct: 3 LYHHPYSLDSQKVRMALEEKGIDYTSYHVNPLTGKNMNVAFFRMNPSAKLPVFQNG 58
>09_04_0532 +
18386593-18386722,18386826-18386900,18387098-18387510,
18387682-18387688,18387944-18388005,18388046-18388341,
18388456-18388813,18388916-18389491,18389956-18390231
Length = 730
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 38 RQQDTPEFKKKNPMRTIPILEEGDFYLADRYPKLSK 73
R+ + P+F+ NP + + +L FYL + +PKLSK
Sbjct: 518 RRDENPKFR--NP-KYLSMLNHLRFYLPEIFPKLSK 550
>01_04_0031 +
15271193-15271342,15272134-15272182,15272894-15273294
Length = 199
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 1 MTPILYKTDASPPARA-VMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEE 59
M P+ A A A V++ ++ +G + + ++ +Q +P +NP +P ++
Sbjct: 1 MAPVKVFGPAKSTAVARVLVCLEEVGAEYELVGIHIPAGEQKSPAHLARNPFGQVPAFQD 60
Query: 60 GDFYLAD 66
GD L D
Sbjct: 61 GDLILFD 67
>11_01_0390 +
2944302-2944400,2945026-2945265,2945809-2946007,
2946423-2946605,2947307-2947380,2947777-2947857,
2948501-2948512
Length = 295
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 30 EQELNPILRQQDTPEFKKKNPMRTIPILEEGDFY 63
+ E+ I R +D P+F P+R + EE D+Y
Sbjct: 111 KDEVVVIGRTEDVPKFGTTQPIRVKRLSEEDDWY 144
>07_03_0135 +
14070212-14070311,14072207-14072968,14082526-14082696,
14082718-14082950,14082966-14083310,14084955-14084966
Length = 540
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 31 QELNPILRQQDTPEFKKKNPMRTIPILEEGDFYLADRYPKLSKWINR 77
+EL +R + P ++ + + LE+GD + D Y +L K + R
Sbjct: 240 EELKVAMRDRFVPPSYHRDLRKKLMRLEQGDKSVQDYYGELQKGVRR 286
>06_01_0864 + 6567619-6567729,6567984-6568136
Length = 87
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 28 VDEQELNPILRQQDT--PEFKKK--NPMRTIPILEEGDFYLADRYPKLSKWINRMNDKEY 83
V E+E+N ++ + + P +++ N T +L+E Y+ + ++ +R++D
Sbjct: 11 VSEEEINELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMA 70
Query: 84 CRKINTPGSEL 94
N+PG+E+
Sbjct: 71 GMDHNSPGAEI 81
>02_03_0256 -
16917212-16917256,16917845-16917879,16918396-16918438,
16919046-16919456
Length = 177
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 19 MIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEGDFYLADRYPKLSKWINRM 78
M+ D L +EL +R + P ++ + + LE+GD + D Y +L K +
Sbjct: 83 MLADDGVLPTTWKELKVAMRDRFVPPSYLRDLSKKLKRLEQGDKSVQDYYGELQKIRKKG 142
Query: 79 ND 80
ND
Sbjct: 143 ND 144
>01_07_0080 -
40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 17 VMMIVDILGLKVDEQELNPI-LRQ--QDTPEFKKKNPMRTIPILEEGD 61
V+ + +L K + +L P+ LR P F NP IP+L++GD
Sbjct: 19 VVRVATVLNEKGLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGD 66
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,467,207
Number of Sequences: 37544
Number of extensions: 133808
Number of successful extensions: 280
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 256
Number of HSP's gapped (non-prelim): 27
length of query: 114
length of database: 14,793,348
effective HSP length: 73
effective length of query: 41
effective length of database: 12,052,636
effective search space: 494158076
effective search space used: 494158076
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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