GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001570-TA|BGIBMGA001570-PA|IPR000842|Phosphoribosyl
pyrophosphate synthetase, IPR005946|Ribose-phosphate
pyrophosphokinase, IPR000836|Phosphoribosyltransferase
         (318 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.1  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 13/87 (14%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 107 ITAKLLANLISVAGADHVITIDLHASQIQGFFNIPVDNLYAEPAITKWIKENIPEWKSSV 166
           + ++  AN +   G ++++     A  I     +    L  + ++  W +  + + ++  
Sbjct: 282 VKSQYQANNVHYQGKENILWTQASAKGISDN-GVLFFGLVGDTSLACWNENRLLDRRNIE 340

Query: 167 MVSPDAGGVKRMTGIADRLDIDFAIIH 193
           +V+ +   ++ +TG+  +  I F ++H
Sbjct: 341 VVAKNKETLQAITGLKVKRRISFILVH 367


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,767
Number of Sequences: 429
Number of extensions: 3062
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 1
length of query: 318
length of database: 140,377
effective HSP length: 58
effective length of query: 260
effective length of database: 115,495
effective search space: 30028700
effective search space used: 30028700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)