GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001569-TA|BGIBMGA001569-PA|IPR000322|Glycoside
hydrolase, family 31
         (509 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   2.2  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   3.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   6.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 102 NYLPYFNKYLEAAFNHTPKWNAT 124
           ++LPYF   + AA N +PK N++
Sbjct: 284 SHLPYFAAAVAAASNLSPKTNSS 306


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 265 PYFYTVLQNGPLLRPMFFQYP 285
           PY+Y  LQN  L   + F+ P
Sbjct: 40  PYYYQYLQNAALYHKLQFRGP 60


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 10/39 (25%), Positives = 23/39 (58%)

Query: 355 VRAGSIIVLQKDVTLTAVDTRLRSQYSLTIALKCSNETL 393
           ++A + ++L    T+ +  TR++S   LTI +  + +T+
Sbjct: 42  IQAWTYLILLTTWTVISASTRIKSFKFLTIGVGITTDTI 80


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,503
Number of Sequences: 317
Number of extensions: 4820
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 509
length of database: 114,650
effective HSP length: 60
effective length of query: 449
effective length of database: 95,630
effective search space: 42937870
effective search space used: 42937870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)