Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001568-TA|BGIBMGA001568-PA|IPR000519|P-type trefoil,
IPR000322|Glycoside hydrolase, family 31
(337 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 36 0.008
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 32 0.10
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 29 0.71
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 28 2.2
SPAC25H1.03 |mug66|mug66|meiotically upregulated gene Mug66|Schi... 26 6.6
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 26 6.6
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 26 6.6
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 26 6.6
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 35.9 bits (79), Expect = 0.008
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 267 SYHGILIEAVAPTVITIRKENQIVLRSITSLGVKLHLFVG--PKPADIMRDVRNLLGVNK 324
S HG+L+ + +R N + R I + V L+++VG P D + +G
Sbjct: 272 STHGVLMLTANGMEVLLRP-NYLQYRIIGGI-VDLYIYVGGTKNPKDTVSQFVQSVGTPA 329
Query: 325 RMEYWMFGAHICR 337
++W FG HICR
Sbjct: 330 MQQHWTFGFHICR 342
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 32.3 bits (70), Expect = 0.10
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 164 SLNFYNPALVEIPHGNRLEEKNYFYDVASPELNVVVNSTERMIFNTNRGPLVASQN 219
S+ Y A+ E+P N E + V P + +STE F+T G A+ N
Sbjct: 982 SVTNYTSAVTELPDPNHQLEMSTTTHVQHPNSETIPSSTENQYFDTTSGAFEANSN 1037
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 29.5 bits (63), Expect = 0.71
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 178 GNRLEEKNYFYDVASPELNVVVNSTERMIFNTNRGPLVASQNIWELTFWLTNESMYGLGE 237
G + + N +VA E++ + + E + G QN+ E LTNES E
Sbjct: 1248 GRKSQSSNVNKEVAISEVSATLENVEVI---ERHGISEQGQNLDESACVLTNESSLSQTE 1304
Query: 238 IPLEKTTKVLYNHNG 252
IP EKT NG
Sbjct: 1305 IPEEKTENETTAVNG 1319
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 210 NRGPLVASQNIWELTFWLTNESM-YGLGEIPLEKTTKVLYNHNGGISGI 257
N G V S + E T WL ++ YG+ P ++VLYN +G + G+
Sbjct: 188 NHGNYVMS--LAEFTRWLAAKAEEYGVEIYPSFAASEVLYNKDGSVIGV 234
>SPAC25H1.03 |mug66|mug66|meiotically upregulated gene
Mug66|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 263 KSGHSYHGILIEAVAPTVITIRKENQIVLRSI--------TSLGVKLHLFVGPKPADIMR 314
K G+ Y +++AV ++ R+ + + R+I T +G +L+ + K A+ +
Sbjct: 10 KIGYKYAAEVVKAVLGVILFHRQFSTVPARTIDVLDITVPTLVGAELNEQLATKAAEFID 69
Query: 315 DVRNLLGVNKRM 326
+RN G N +M
Sbjct: 70 TIRNEAGANGQM 81
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 142 FSFQN--SLPRIKLSIDEVSKSHLSLNFYNPALVEIPHGNRLEEKNY 186
+ FQN SLP IK + ++ S+N N V+ H +L+ + Y
Sbjct: 574 YQFQNMESLPLIKEELMQLKNEETSINIPNETAVKEFHDLKLQLEKY 620
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 301 LHLFVGPKPADIMRDVRNLLGVNKRMEYWMFGAHICR 337
L +F+GPK +D+ L+G + G H CR
Sbjct: 346 LFIFLGPKASDVYESYSALVGRPLLPPLFSIGYHQCR 382
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 267 SYHGILIEAVAPTVITIRKENQIVLRSITSLGVKLHLFVGP--KPADIMRDVRNLLGVNK 324
S HG+L+ A + + +++ + R I + + L ++ G P + ++ +G
Sbjct: 256 SSHGVLM-LTANGMDVLLRQDYLQYRMIGGV-IDLFVYSGSTESPKETVKQFVQSIGKPA 313
Query: 325 RMEYWMFGAHICR 337
+YW G H CR
Sbjct: 314 MHQYWTLGYHSCR 326
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.139 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,577,643
Number of Sequences: 5004
Number of extensions: 64695
Number of successful extensions: 133
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 129
Number of HSP's gapped (non-prelim): 8
length of query: 337
length of database: 2,362,478
effective HSP length: 73
effective length of query: 264
effective length of database: 1,997,186
effective search space: 527257104
effective search space used: 527257104
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 54 (25.8 bits)
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