Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001568-TA|BGIBMGA001568-PA|IPR000519|P-type trefoil,
IPR000322|Glycoside hydrolase, family 31
(337 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08) 36 0.062
SB_45780| Best HMM Match : Trefoil (HMM E-Value=0.0002) 33 0.25
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_27446| Best HMM Match : Peptidase_C21 (HMM E-Value=2.7) 33 0.44
SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08) 31 1.3
SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05) 31 1.3
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 31 1.8
SB_41594| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_437| Best HMM Match : Peptidase_A17 (HMM E-Value=0.00012) 28 9.4
>SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08)
Length = 696
Score = 35.5 bits (78), Expect = 0.062
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 141 PFSFQNSLPRIKLSIDEVSKSHLSLNFYNPALVEIPHGNRLEEKNYFYDVASPELNVVVN 200
P + N L ++ ++D+V+K H+ L +N L++ P GN+ + Y+ + +L+ ++N
Sbjct: 540 PIDYFNDLEQLIKAVDDVNKEHVILGDFNCCLMKRPIGNKTKRLKKLYE--TYQLSQLLN 597
Query: 201 STERM 205
R+
Sbjct: 598 EPTRI 602
>SB_45780| Best HMM Match : Trefoil (HMM E-Value=0.0002)
Length = 53
Score = 33.5 bits (73), Expect = 0.25
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 78 CLVARTLRLPCGYANVNSEQCHP-HCCYDFRSKTCF-HRFPSRFSYVMDRV 126
C V R PCGY + + C CCYD TCF HR + +R+
Sbjct: 3 CSVKIADREPCGYDGIPVDACRDLDCCYDKGLGTCFNHRKALHIEHTENRL 53
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 141 PFSFQNSLPRIKLSIDEVSKSHLSLNFYNPALVEIPHGNRLEEKNYFYDVASPELNVVVN 200
P + N L ++ ++D+V+K H+ L N LV+ P N+ + Y+ + +L+ ++N
Sbjct: 309 PIDYFNDLEQLIKAVDDVNKEHVMLGDLNCCLVKRPIENKTKRLKKIYE--TYQLSQLLN 366
Query: 201 STERMIFNT 209
R+ ++
Sbjct: 367 EPTRITMHS 375
>SB_27446| Best HMM Match : Peptidase_C21 (HMM E-Value=2.7)
Length = 246
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/69 (23%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 141 PFSFQNSLPRIKLSIDEVSKSHLSLNFYNPALVEIPHGNRLEEKNYFYDVASPELNVVVN 200
P + N L ++ ++D+V+K H+ L +N L++ P N+ + Y+ + +L+ ++N
Sbjct: 5 PIDYFNDLEQLIKAVDDVNKEHVILGDFNCCLMKRPIENKTKRLKEIYE--TYQLSQLLN 62
Query: 201 STERMIFNT 209
R+ ++
Sbjct: 63 EPTRITMHS 71
>SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08)
Length = 993
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 141 PFSFQNSLPRIKLSIDEVSKSHLSLNFYNPALVEIPHGNRLEEKNYFYDVASPELNVVVN 200
P + N L ++ ++D+V+K H+ L N L++ P N+ + Y+ + +L+ ++N
Sbjct: 572 PIDYFNDLEQLIKAVDDVNKEHVILGDLNCCLMKRPIENKTKRLKKIYE--TYQLSQLLN 629
Query: 201 STERMIFNT 209
R+ ++
Sbjct: 630 EPTRITMHS 638
>SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05)
Length = 670
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 141 PFSFQNSLPRIKLSIDEVSKSHLSLNFYNPALVEIPHGNRLEEKNYFYDVASPELNVVVN 200
P + N L ++ ++D+V+K H+ L N L++ P N+ + Y+ + +L+ ++N
Sbjct: 453 PIDYFNDLEQLIKAVDDVNKEHVILGDLNCCLMKRPIENKTKRLKKIYE--TYQLSQLLN 510
Query: 201 STERMIFNT 209
R+ ++
Sbjct: 511 EPTRITMHS 519
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 66 DLPPADGFSFGSCL-VARTLRLPCGYANVNSEQC--HPHCCYD 105
D+ DG+ G C V R+ CGY +N + C CC+D
Sbjct: 1270 DILFTDGYCVGLCSSVKPNQRVDCGYLGINKDSCVRGRGCCWD 1312
>SB_41594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 127 WDEDVVLSARVATIPFSFQNSLPRIKLSIDEVSKSHLSLNFYNPALVEIPHGNRLEEKNY 186
W VV+ V T+ F Q L K + E+ + LSL+ P V++P G ++ NY
Sbjct: 20 WLSVVVVLIAVYTVVFVLQAGLGLFKTRLRELPQETLSLSVSAPLNVQLPRG--IDRINY 77
>SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 200 NSTERMIFNTNRGPLVASQNIWELTFWLTNESMYGLGEIPLEKTTKVLY 248
NSTE TN GP +A++ + L + LT+ + G G I T + L+
Sbjct: 254 NSTEYDY--TNTGPTIAARYVSALYYTLTSLTTIGFGNISPNTTAEKLF 300
>SB_437| Best HMM Match : Peptidase_A17 (HMM E-Value=0.00012)
Length = 592
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 95 SEQCHPHCCYDFRSKTCFHRFPSRFSYVMDRVWD 128
SE C P C+DF T R PS + YV + D
Sbjct: 516 SEDC-PSVCFDFNRVTGCSRQPSMYPYVYQKCAD 548
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.139 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,069,349
Number of Sequences: 59808
Number of extensions: 429313
Number of successful extensions: 749
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 742
Number of HSP's gapped (non-prelim): 10
length of query: 337
length of database: 16,821,457
effective HSP length: 83
effective length of query: 254
effective length of database: 11,857,393
effective search space: 3011777822
effective search space used: 3011777822
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
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