GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001568-TA|BGIBMGA001568-PA|IPR000519|P-type trefoil,
IPR000322|Glycoside hydrolase, family 31
         (337 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   3.0  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    24   5.3  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 101 HCCYDFRSKTCFHRFPSRFSYVMDRVWDEDVVLSAR 136
           HCC DF +  C    P + +   D+ W  +VV  +R
Sbjct: 745 HCC-DFYACDCKMECPKQCTCYHDQSWSSNVVDCSR 779


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/32 (28%), Positives = 19/32 (59%)

Query: 175 IPHGNRLEEKNYFYDVASPELNVVVNSTERMI 206
           +PH    +++ +  + A+ EL  VVN+ + +I
Sbjct: 67  VPHAEHFQDEYFSCEPAALELGCVVNNIKHII 98


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.139    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,446
Number of Sequences: 2123
Number of extensions: 13731
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 2
length of query: 337
length of database: 516,269
effective HSP length: 64
effective length of query: 273
effective length of database: 380,397
effective search space: 103848381
effective search space used: 103848381
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 48 (23.4 bits)