GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001568-TA|BGIBMGA001568-PA|IPR000519|P-type trefoil,
IPR000322|Glycoside hydrolase, family 31
         (337 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    26   0.40 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    26   0.54 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   1.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   2.2  
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    22   6.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   8.7  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 72  GFSFGSCLVARTLRLPCGYANVNSEQCHPHCCYDFRSKTCFHRFPSRFSYVMDRVWDEDV 131
           G +  S   AR+ +  C Y       CH  CC DF +  C    P+      DR W+ + 
Sbjct: 721 GVAIVSASTARSEQFLCRYEAHCFALCH--CC-DFDACDCEMTCPAGCKCYNDRTWNTNA 777

Query: 132 V 132
           V
Sbjct: 778 V 778


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 316 VRNLLGVNKRMEYWMFGAHIC 336
           V    GVN  + YW+FG   C
Sbjct: 78  VMTFAGVNDLLGYWVFGPRFC 98


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 121 YVMDRVWDEDVVLSARVATIPFSFQ-NSLPRIKLSIDEVSKSHLSLNFYN 169
           Y +  +   D+ L+     I + F  N+  +IK   DE +K  +SL FYN
Sbjct: 514 YGIGFITQSDIELANTFKAIIYGFNVNATKQIK---DEANKKGVSLRFYN 560


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 137 VATIPFSFQNSLPRIKLSIDEVSKSHLSLNFYN 169
           +AT P  F N  P+   +IDE + + L    +N
Sbjct: 353 LATEPTLFSNVTPKFPRNIDEYNNNDLDTKKWN 385


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 58

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 176 PHGNRLEEKNYFYDVASPELNVVVNSTERMIFNTNRGPLVASQNI 220
           P G+  EE+    D+ SP    + N  E+      RG    S+N+
Sbjct: 8   PRGSSAEEQQPSGDILSPSSEPLDNDKEQSAQVCYRGAPQDSENL 52


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 176 PHGNRLEEKNYFYDVASPELNVVVNSTERMIFNTNRGPLVASQNI 220
           P G+  EE+    D+ SP    + N  E+      RG    S+N+
Sbjct: 8   PRGSSAEEQQPSGDILSPSSEPLDNDKEQSAQVCYRGAPQDSENL 52


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 329 WMFGAHICR 337
           W+FG H+C+
Sbjct: 102 WIFGIHLCK 110


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.139    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,784
Number of Sequences: 429
Number of extensions: 3929
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 7
length of query: 337
length of database: 140,377
effective HSP length: 58
effective length of query: 279
effective length of database: 115,495
effective search space: 32223105
effective search space used: 32223105
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 44 (21.8 bits)