Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001567-TA|BGIBMGA001567-PA|undefined
(90 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical pr... 29 0.53
Z92813-1|CAB07286.1| 393|Caenorhabditis elegans Hypothetical pr... 27 1.2
U40947-1|AAC48068.1| 610|Caenorhabditis elegans Hypothetical pr... 27 2.1
AF016428-4|AAO26000.3| 445|Caenorhabditis elegans Ground-like (... 26 2.8
Z81517-5|CAB04212.1| 685|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p... 25 8.6
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 25 8.6
U64601-3|ABC71817.1| 485|Caenorhabditis elegans Temporarily ass... 25 8.6
U64601-2|AAQ82847.1| 592|Caenorhabditis elegans Temporarily ass... 25 8.6
U64601-1|AAB04573.2| 564|Caenorhabditis elegans Temporarily ass... 25 8.6
AF077542-9|AAC26301.1| 354|Caenorhabditis elegans Hypothetical ... 25 8.6
>Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical
protein F59B2.12 protein.
Length = 918
Score = 28.7 bits (61), Expect = 0.53
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 40 DLISAFDTKAQAHTELQKVTAFSGQFDKNHKPTFSKDEYGNLEDFAI 86
D + A T + +H++ T+ +K H S DE+GN+++ +I
Sbjct: 421 DSVDANGTVSSSHSKSASGTSLDENHNKTHALQASVDEHGNMKNHSI 467
>Z92813-1|CAB07286.1| 393|Caenorhabditis elegans Hypothetical
protein T28A8.1 protein.
Length = 393
Score = 27.5 bits (58), Expect = 1.2
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 7 RGGRLCLFVARCALSLALQALNGTPQRESSSLTDLISAFDTKAQAHTELQKVTAFSGQFD 66
RG LC+ A + L L + + S ++ L + + K + QK + S + D
Sbjct: 142 RGKLLCILYALFGVPLILITVADIGKFLSENIVQLYTWY-RKLREKCSKQKYSVISSKDD 200
Query: 67 KNHKPTFSKDEYGNLEDFAIFVI 89
KN + + D N IF+I
Sbjct: 201 KNKEGDLNLDHLENYISIPIFLI 223
>U40947-1|AAC48068.1| 610|Caenorhabditis elegans Hypothetical
protein R03E9.2 protein.
Length = 610
Score = 26.6 bits (56), Expect = 2.1
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 21 SLALQALNGTPQRESSSLTDLISAFDTKAQAHTELQKVTAFSGQFDKNHKPTFSKDEYGN 80
SL AL +P +E S I + A + F G+FD+N +P +K+
Sbjct: 540 SLQFYALQSSPAQEMSLQMYSILKNNLAAAIARAYRPEKIFYGKFDRNMRPLGAKEALDG 599
Query: 81 LEDFAI 86
FAI
Sbjct: 600 ALIFAI 605
>AF016428-4|AAO26000.3| 445|Caenorhabditis elegans Ground-like (grd
related) protein18 protein.
Length = 445
Score = 26.2 bits (55), Expect = 2.8
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 45 FDTKAQAHTELQKVTAFSGQFDKNHKPTFSKD----EYGNLED 83
++ ++ +TEL VTAF+ + D+ +K + S EYG + D
Sbjct: 289 YENRSPNNTELADVTAFTQEVDEFYKSSTSSPAQTFEYGAVRD 331
>Z81517-5|CAB04212.1| 685|Caenorhabditis elegans Hypothetical
protein F28B1.5 protein.
Length = 685
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 13 LFVARCALSLALQALN-GTPQRESSSLTDLISAFD 46
LF+ + + N GTP+ E LTDLI A D
Sbjct: 490 LFIRNPETPIIFRRFNAGTPKTEQIPLTDLICAQD 524
>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
protein F36H1.2c protein.
Length = 1427
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 16 ARCALSLALQALNGTPQRESSSLTDLISAFDTKAQAHTEL 55
AR A L + L Q E L D+I + D ++HT L
Sbjct: 751 ARNAHKLRFEGLMQKLQTEVDLLADMIRSLDAFTRSHTRL 790
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical
protein F36H1.2b protein.
Length = 1379
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 16 ARCALSLALQALNGTPQRESSSLTDLISAFDTKAQAHTEL 55
AR A L + L Q E L D+I + D ++HT L
Sbjct: 722 ARNAHKLRFEGLMQKLQTEVDLLADMIRSLDAFTRSHTRL 761
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical
protein F36H1.2a protein.
Length = 1398
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 16 ARCALSLALQALNGTPQRESSSLTDLISAFDTKAQAHTEL 55
AR A L + L Q E L D+I + D ++HT L
Sbjct: 722 ARNAHKLRFEGLMQKLQTEVDLLADMIRSLDAFTRSHTRL 761
>U64601-3|ABC71817.1| 485|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform c protein.
Length = 485
Score = 24.6 bits (51), Expect = 8.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 32 QRESSSLTDLISAFDTKAQAHTEL 55
+RE SL D++++ DT + +TE+
Sbjct: 309 ERECHSLADIVNSADTPVRKNTEV 332
>U64601-2|AAQ82847.1| 592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform b protein.
Length = 592
Score = 24.6 bits (51), Expect = 8.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 32 QRESSSLTDLISAFDTKAQAHTEL 55
+RE SL D++++ DT + +TE+
Sbjct: 416 ERECHSLADIVNSADTPVRKNTEV 439
>U64601-1|AAB04573.2| 564|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform a protein.
Length = 564
Score = 24.6 bits (51), Expect = 8.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 32 QRESSSLTDLISAFDTKAQAHTEL 55
+RE SL D++++ DT + +TE+
Sbjct: 388 ERECHSLADIVNSADTPVRKNTEV 411
>AF077542-9|AAC26301.1| 354|Caenorhabditis elegans Hypothetical
protein Y57G7A.8 protein.
Length = 354
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 47 TKAQAHTELQKVTAFSGQFDKNHKPTFSKDEYGNLEDFA 85
TK+Q L K A S +N P KDE E+ A
Sbjct: 96 TKSQLQQLLVKANAKSASHQENQDPEEEKDEDDEYEEAA 134
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,080,543
Number of Sequences: 27539
Number of extensions: 64870
Number of successful extensions: 169
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 160
Number of HSP's gapped (non-prelim): 13
length of query: 90
length of database: 12,573,161
effective HSP length: 69
effective length of query: 21
effective length of database: 10,672,970
effective search space: 224132370
effective search space used: 224132370
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)
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