GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001566-TA|BGIBMGA001566-PA|IPR002219|Protein kinase C,
phorbol ester/diacylglycerol binding, IPR000008|C2 calcium-dependent
membrane targeting, IPR008973|C2 calcium/lipid-binding region, CaLB
         (1958 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   1.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   1.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   1.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   1.3  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    26   2.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   3.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 620 YENKNVKIDYNLRSNEQLLKNVCSSRDLQKFQDKIESDYYKSEMH 664
           +ENK   +++ L+S  +L ++  + R  QK+   ++ DYY+ E H
Sbjct: 571 HENKEEMMEF-LKSILRLDEDQSARRVAQKYLRVVDPDYYEFETH 614


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 620 YENKNVKIDYNLRSNEQLLKNVCSSRDLQKFQDKIESDYYKSEMH 664
           +ENK   +++ L+S  +L ++  + R  QK+   ++ DYY+ E H
Sbjct: 571 HENKEEMMEF-LKSILRLDEDQSARRVAQKYLRVVDPDYYEFETH 614


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 620 YENKNVKIDYNLRSNEQLLKNVCSSRDLQKFQDKIESDYYKSEMH 664
           +ENK   +++ L+S  +L ++  + R  QK+   ++ DYY+ E H
Sbjct: 571 HENKEEMMEF-LKSILRLDEDQSARRVAQKYLRVVDPDYYEFETH 614


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 620 YENKNVKIDYNLRSNEQLLKNVCSSRDLQKFQDKIESDYYKSEMH 664
           +ENK   +++ L+S  +L ++  + R  QK+   ++ DYY+ E H
Sbjct: 571 HENKEEMMEF-LKSILRLDEDQSARRVAQKYLRVVDPDYYEFETH 614


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
            protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 2.9
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 1378 SPMKETWKDITTFPSIEESVDSTKDHDQESDDDKSYADTGSGE-TSGPD 1425
            SP+  T      +  I++    + D D + DDD S ++  +   TS PD
Sbjct: 264  SPLGHTLSMNHKYEKIDKEEHESMDDDDDDDDDMSNSENQNPRFTSSPD 312


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 3.9
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 611 LETLVDSYMYENKNVKIDYNLRSNEQLLKNVCSSRDLQKFQDKIESDYYKS 661
           L+ LVD  M E   ++ID N R N+  +  +   ++  K Q + ESD   S
Sbjct: 321 LDVLVD--MCEQDIIRIDRNTRFNQDKIVALRQEQETLKSQVQRESDVVDS 369


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.128    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,428
Number of Sequences: 317
Number of extensions: 17139
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 12
length of query: 1958
length of database: 114,650
effective HSP length: 67
effective length of query: 1891
effective length of database: 93,411
effective search space: 176640201
effective search space used: 176640201
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 50 (24.2 bits)