Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001566-TA|BGIBMGA001566-PA|IPR002219|Protein kinase C,
phorbol ester/diacylglycerol binding, IPR000008|C2 calcium-dependent
membrane targeting, IPR008973|C2 calcium/lipid-binding region, CaLB
(1958 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22897| Best HMM Match : C2 (HMM E-Value=4.1e-11) 180 1e-44
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-10
SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36) 57 1e-07
SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-07
SB_794| Best HMM Match : C2 (HMM E-Value=1e-23) 55 5e-07
SB_28412| Best HMM Match : C1_1 (HMM E-Value=5.5e-17) 55 7e-07
SB_3985| Best HMM Match : C2 (HMM E-Value=0) 54 9e-07
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 52 5e-06
SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-05
SB_22391| Best HMM Match : C1_1 (HMM E-Value=3.6e-17) 48 8e-05
SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-04
SB_41604| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-04
SB_45184| Best HMM Match : C2 (HMM E-Value=1.1e-22) 47 2e-04
SB_43325| Best HMM Match : C2 (HMM E-Value=1.1e-22) 47 2e-04
SB_29967| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-04
SB_20559| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-04
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 47 2e-04
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 46 4e-04
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 46 4e-04
SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18) 45 7e-04
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 0.001
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 0.001
SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31) 44 0.001
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 0.001
SB_2344| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 0.002
SB_27807| Best HMM Match : C2 (HMM E-Value=0) 43 0.003
SB_40281| Best HMM Match : C2 (HMM E-Value=6.7e-39) 42 0.004
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.026
SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.061
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.061
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 38 0.061
SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.14
SB_2343| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.14
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.19
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.25
SB_36579| Best HMM Match : C1_1 (HMM E-Value=0.00011) 36 0.33
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.43
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 36 0.43
SB_6197| Best HMM Match : C2 (HMM E-Value=3.7e-24) 36 0.43
SB_21545| Best HMM Match : FerB (HMM E-Value=3.1e-30) 35 0.57
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 35 0.57
SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.57
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.57
SB_36731| Best HMM Match : F5_F8_type_C (HMM E-Value=0.74) 35 0.57
SB_59643| Best HMM Match : DUF1610 (HMM E-Value=3.3) 35 0.75
SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33) 35 0.75
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 35 0.75
SB_19234| Best HMM Match : Extensin_2 (HMM E-Value=0.23) 34 1.00
SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 1.00
SB_18384| Best HMM Match : HSBP1 (HMM E-Value=1.5) 34 1.00
SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33) 34 1.00
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 34 1.3
SB_19229| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 1.3
SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12) 34 1.3
SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.7
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.7
SB_59294| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.20004e-41) 33 1.7
SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42) 33 1.7
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.7
SB_22915| Best HMM Match : DEAD_2 (HMM E-Value=1.9e-39) 33 1.7
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.7
SB_40384| Best HMM Match : Filament (HMM E-Value=0.76) 33 2.3
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 2.3
SB_5939| Best HMM Match : BAH (HMM E-Value=7.9e-18) 33 2.3
SB_59658| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 2.3
SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 2.3
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 33 2.3
SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27) 33 2.3
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 33 2.3
SB_15459| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 2.3
SB_7686| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 2.3
SB_7181| Best HMM Match : C2 (HMM E-Value=1.2e-15) 33 2.3
SB_53568| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.61) 33 3.0
SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56) 33 3.0
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 3.0
SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 33 3.0
SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07) 33 3.0
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27) 33 3.0
SB_3618| Best HMM Match : C2 (HMM E-Value=4.8e-23) 33 3.0
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 33 3.0
SB_1955| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 3.0
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 4.0
SB_20440| Best HMM Match : SRP-alpha_N (HMM E-Value=1.4) 32 4.0
SB_45970| Best HMM Match : rve (HMM E-Value=1.7e-11) 32 4.0
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 4.0
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 4.0
SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 4.0
SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17) 32 5.3
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 32 5.3
SB_56067| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 5.3
SB_50605| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 5.3
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 32 5.3
SB_21820| Best HMM Match : DUF622 (HMM E-Value=2.7) 32 5.3
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 32 5.3
SB_1381| Best HMM Match : TP2 (HMM E-Value=5.2) 32 5.3
SB_57502| Best HMM Match : Toxin_8 (HMM E-Value=8.8) 31 7.0
SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 31 7.0
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_27829| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_20635| Best HMM Match : rve (HMM E-Value=0.91) 31 7.0
SB_59713| Best HMM Match : eIF-4B (HMM E-Value=4.5) 31 7.0
SB_55549| Best HMM Match : zf-C2H2 (HMM E-Value=0.79) 31 7.0
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 31 7.0
SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 31 7.0
SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_23551| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.0
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 9.3
SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 9.3
SB_20155| Best HMM Match : Fe_dep_repress (HMM E-Value=2.6) 31 9.3
SB_9098| Best HMM Match : Rho_RNA_bind (HMM E-Value=8.9) 31 9.3
SB_54| Best HMM Match : Actin (HMM E-Value=0) 31 9.3
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 9.3
>SB_22897| Best HMM Match : C2 (HMM E-Value=4.1e-11)
Length = 314
Score = 180 bits (437), Expect = 1e-44
Identities = 89/125 (71%), Positives = 99/125 (79%), Gaps = 14/125 (11%)
Query: 1832 SGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHNSSDRIKVRVWDEDNDLKSKL 1891
+GTSDPYVTVQV K KKRT T+P ELNP WNE F + DED+D+KS++
Sbjct: 76 TGTSDPYVTVQVGKTKKRTSTIPHELNPEWNETF--------------LLDEDDDIKSRV 121
Query: 1892 RQKLTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHINVEIKGEEKVA 1951
RQKL RE DDFLGQTIIEVRTLSGEMDVWYNLEKRTD+SAVSGAIRL I++EIKGEEKV
Sbjct: 122 RQKLIREPDDFLGQTIIEVRTLSGEMDVWYNLEKRTDRSAVSGAIRLRISIEIKGEEKVV 181
Query: 1952 PYHVQ 1956
PYH Q
Sbjct: 182 PYHTQ 186
Score = 101 bits (242), Expect = 6e-21
Identities = 46/79 (58%), Positives = 61/79 (77%)
Query: 1642 AAEKSSKHGAEDKANSIITAMKERMKQRERDKPEIFELIRRVFSIEQEGHAAHMSTVKQS 1701
AAEKS +HG+ DK SII AMK RM++RER KPEIF+LIR VF ++ + HA +++ VK
Sbjct: 2 AAEKSVRHGSNDKTQSIIVAMKSRMEERERLKPEIFQLIREVFRVDPKTHAGYLNNVKTQ 61
Query: 1702 VLDGTSKWSAKIAITGSQE 1720
+ GTSKWSAKI+ITG+ +
Sbjct: 62 IWMGTSKWSAKISITGTSD 80
Score = 43.2 bits (97), Expect = 0.002
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 1748 FMWRRRTFNVDPDTHIDSLEQAKQVTIEGTSKWSCKIAITG 1788
F R F VDP TH L K GTSKWS KI+ITG
Sbjct: 37 FQLIREVFRVDPKTHAGYLNNVKTQIWMGTSKWSAKISITG 77
>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 66.9 bits (156), Expect = 2e-10
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 1562 LNDEELKMHVYKKTLQALIYPISSTTPHNFVLWTATSPTYCYECEGLLWGIARQGVRCTE 1621
+ +E+ + K Q L S HNF T SPTYC C GLL GI +QG RC +
Sbjct: 327 ITKDEMNSYFLKVNCQNLTREFS----HNFQETTYFSPTYCDHCGGLLRGIIKQGCRCRD 382
Query: 1622 CGVKCHEKCKDLLNADCLQRAAEKSSKHGAEDKANSIITAMKERMKQR 1669
C + CH+ CK L +C R+ + G D++ + ++ R+K +
Sbjct: 383 CHINCHKSCKKELVIECRNRS--PTHNMGTLDRSPNKTDTLRGRIKSK 428
>SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36)
Length = 454
Score = 57.2 bits (132), Expect = 1e-07
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Query: 1582 PISSTTPHNFVLWTATSPTYCYECEGLLWGIARQGVRCTECGVKCHEKCKDLLNADCLQR 1641
P+SS PHNF T SP +C C LL+G+ QG++CT C + H+KC+ + C
Sbjct: 28 PVSS--PHNFGPHTYKSPCFCDHCGSLLYGVYHQGLKCTACDMNVHKKCEKAVPKLC--- 82
Query: 1642 AAEKSSKHGAEDKANSIITAMKERMKQRERDKPEIFELIRRVFSIEQEGHAAHMSTVK-Q 1700
A+ + + G S M++R + E+ E R + ++ G + VK
Sbjct: 83 GADHTERRGRIHLKISYECHSTHSMEERGIMRVEVRE-ARNLMPMDPNGLSDPYVKVKLL 141
Query: 1701 SVLDGTSKWSAKI 1713
D TSK KI
Sbjct: 142 PDPDNTSKKKTKI 154
Score = 48.8 bits (111), Expect = 4e-05
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 1826 LIAKDKSGTSDPYVTVQV-----SKVKKRTRTMPQELNPVWNEKFYFECHNSSD--RIKV 1878
L+ D +G SDPYV V++ + KK+T+ + L+PV+NE F F+ N R+ +
Sbjct: 123 LMPMDPNGLSDPYVKVKLLPDPDNTSKKKTKIFKESLSPVFNETFEFKIQNKDKDRRLSI 182
Query: 1879 RVWDEDNDLKSKLRQKLTRESDDFLGQTIIE--VRTLSGEMDVWYNL 1923
VWD D ++ L+ + L + +E + LS E +YN+
Sbjct: 183 EVWDWDRTTRNDFMGSLSFGVSE-LQKNGVEGWFKLLSQEEGEYYNI 228
>SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 55.6 bits (128), Expect = 4e-07
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 1588 PHNFVLWTATSPTYCYECEGLLWGIARQGVRCTECGVKCHEKC 1630
PH F + SPT+C C LL+G+ RQG++C C + CH KC
Sbjct: 148 PHKFKVNNYLSPTFCDHCGSLLYGLFRQGLKCEACNMNCHHKC 190
>SB_794| Best HMM Match : C2 (HMM E-Value=1e-23)
Length = 583
Score = 55.2 bits (127), Expect = 5e-07
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 1830 DKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHNSSDRIKV------RVWDE 1883
D +G SDPY V V ++RT +NP W E FE +++ W
Sbjct: 65 DPNGKSDPYCIVAVGDQEQRTAVQYNTINPEWRETLQFEVAGVPQLMQIDGDETSANWCM 124
Query: 1884 DNDLKSKLRQKLTRESDDFLGQTIIEVRTLS-GEMDVWYNLEKRTDKSAVSGAIRLHI 1940
+ ++ ++ + T DDF+G+ +I V LS + + WY L + T K V+G + L I
Sbjct: 125 VHYIQIEVWDRDTLNRDDFMGRLMIPVSALSERQRNGWYPLGRATPKDGVTGEMYLEI 182
Score = 35.5 bits (78), Expect = 0.43
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 1876 IKVRVWDEDNDLKSKLRQKLTRESDDFLGQTIIEVRTLSG-EMDVWYNLEKRTDKSAVSG 1934
I++ VWD D T DDF+G+ +I V LS + + WY L + T K V+G
Sbjct: 236 IQIEVWDRD-----------TLNRDDFMGRLMIPVSALSERQRNGWYPLGRATPKDGVTG 284
Query: 1935 AIRLHI 1940
+ L I
Sbjct: 285 EMYLEI 290
>SB_28412| Best HMM Match : C1_1 (HMM E-Value=5.5e-17)
Length = 490
Score = 54.8 bits (126), Expect = 7e-07
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 1589 HNFVLWTATSPTYCYECEGLLWGIARQGVRCTECGVKCHEKCKDLLNADCL 1639
H+F+ ++ +PT+C C +WG+ +Q +RC C CH +C+ ++ DCL
Sbjct: 208 HSFLPFSLRNPTWCDLCGEFIWGLYKQAIRCKHCKYTCHRRCRIDVDLDCL 258
>SB_3985| Best HMM Match : C2 (HMM E-Value=0)
Length = 835
Score = 54.4 bits (125), Expect = 9e-07
Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 19/121 (15%)
Query: 1826 LIAKD----KSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHNSSDR-IKVRV 1880
L+AKD K G SDPY +++ K RT+ +LNP WNE F NS + I + +
Sbjct: 375 LVAKDFGVVKKGKSDPYAILEIGAQKFRTKVKKNDLNPTWNETFEAFVDNSEGQDIDMFL 434
Query: 1881 WDEDNDLKSKLRQKLTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 1940
WDED K+ KL FL T I G+ DVW L+ A +G LH+
Sbjct: 435 WDED---KAGKDSKL-----GFL-STQIASAVEQGQRDVWLPLQ-----GAKTGRAHLHL 480
Query: 1941 N 1941
+
Sbjct: 481 S 481
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 52.0 bits (119), Expect = 5e-06
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1809 QKDSKARYNVIPLGYNGLIAKDKSGTSDPYVTVQVSKVKK-RTRTMPQELNPVWNEKFYF 1867
+K + V L L+A D +G SDP+VT +V +K R+R + LNPVW E
Sbjct: 602 RKSERGAIQVSVLRGRNLVAMDITGKSDPFVTFRVGDQEKFRSRVHQKTLNPVWMESVAL 661
Query: 1868 ECHNSSDRIKVRVWDED 1884
D++ + VWD+D
Sbjct: 662 SLPADDDKLYLDVWDKD 678
Score = 44.8 bits (101), Expect = 7e-04
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 1822 GYNGLIAKDKSGTSDPYVTVQVSK-VKKRTRTMPQELNPVWNEKFYFECHNSSD-RIKVR 1879
G +I DK+G SDPY V ++ + K+T + L+PVWN F N + +
Sbjct: 482 GGESMIPMDKNGLSDPYCVVYANRNLVKKTEVAKETLDPVWNAMVEFPVANFTQVTLSFA 541
Query: 1880 VWDED---NDLKSKLRQKLTRES 1899
V+D+D +D KLT+E+
Sbjct: 542 VFDKDDAIDDFLGSCNFKLTKET 564
>SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 48.8 bits (111), Expect = 4e-05
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 1826 LIAKDKSGTSDPYVTVQVS-KVKKRTRTMPQELNPVWNEKFYFECHNSSDRIKVRVWDED 1884
L A+DK+GTSDPYV + + ++RT+ + LNP WNEKF + + + ++V+D D
Sbjct: 143 LAARDKTGTSDPYVKFKADGRQIYKSRTISKNLNPQWNEKFCVPIEDITVPMVLKVFDFD 202
Score = 48.4 bits (110), Expect = 6e-05
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 1825 GLIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHNSSDRIKVRVWDED 1884
GL + D G SDP+ ++V+ + T T+ + LNP WN+ + + D + + V+DED
Sbjct: 479 GLASADLGGASDPFAVIEVNNQRLVTNTIYKTLNPNWNKIYEMPVWDIHDVLDITVFDED 538
Query: 1885 NDLKSKLRQKLTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHINV 1942
R + +FLG+ +I + ++ Y L+ ++ + G + L ++V
Sbjct: 539 K-----------RGAPEFLGRVVIPLLHITPCEKRLYQLKNKSLEGRAKGHLILTLDV 585
Score = 47.2 bits (107), Expect = 1e-04
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Query: 1826 LIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHNSSDRI-KVRVWDED 1884
+I D SG SDPY ++ K +++ + LNP W+E+F + + S + ++ V+D D
Sbjct: 286 MIPMDDSGFSDPYCRFRLGNEKYKSKACKETLNPQWSEQFDLKMYPDSPMVLEITVYDRD 345
Query: 1885 NDLKSKLRQKLTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHINVEI 1944
+R+ D+F+G+ I++ L E + +E + A G I +H+++
Sbjct: 346 ------IRK------DEFMGRCQIDLNQLEREKS--HKIEAELEDGA--GIIVMHLSITG 389
Query: 1945 KGEE--KVAPYHVQ 1956
G + +V P VQ
Sbjct: 390 SGRQGVRVGPGCVQ 403
>SB_22391| Best HMM Match : C1_1 (HMM E-Value=3.6e-17)
Length = 103
Score = 48.0 bits (109), Expect = 8e-05
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 1563 NDEELKMHVYKKTLQALIYPISS--TT---PHNFVLWTATSPTYCYECEGLLWGIARQGV 1617
+D+E ++Y K + ++ TT H FV P +CY C LL G +QGV
Sbjct: 17 DDDESLTNIYDKRQSVITSAMAKPKTTRAAKHEFVEHNFRKPQFCYYCNKLLKGFIKQGV 76
Query: 1618 RCTECGVKCHEKCKD 1632
+C C + H KC++
Sbjct: 77 KCKNCKMGVHHKCQE 91
>SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 47.2 bits (107), Expect = 1e-04
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 1589 HNFVLWTATSPTYCYECEGLLWGIARQGVRCTECGVKCHEKCKDLLNADC 1638
H + + SPT+C C +L+G+ RQG++C CG H++C + +C
Sbjct: 101 HQLAVHSYKSPTFCDFCGQMLYGLVRQGLKCDGCGGNFHKRCAYRIRNNC 150
>SB_41604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 47.2 bits (107), Expect = 1e-04
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 1826 LIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHN-SSDRIKVRVWDED 1884
L + D SG SDPY V + + +TR PQ LNP WN F + D + + V+D D
Sbjct: 279 LKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTFTVKDMEQDVLCITVFDRD 338
Query: 1885 NDLKSKLRQKLT 1896
++ R+ T
Sbjct: 339 FFSPNESRRAFT 350
>SB_45184| Best HMM Match : C2 (HMM E-Value=1.1e-22)
Length = 344
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1826 LIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHN-SSDRIKVRVWDED 1884
L + D SG SDPY V + + +TR PQ LNP WN F + D + + V+D D
Sbjct: 279 LKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTFTVKDMEQDVLCITVFDRD 338
>SB_43325| Best HMM Match : C2 (HMM E-Value=1.1e-22)
Length = 87
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1826 LIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHN-SSDRIKVRVWDED 1884
L + D SG SDPY V + + +TR PQ LNP WN F + D + + V+D D
Sbjct: 22 LKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTFTVKDMEQDVLCITVFDRD 81
>SB_29967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 1818 VIPLGYNGLIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFE 1868
V+ + + L + G SDPYV V KK+T + ELNPVWNEKF ++
Sbjct: 4 VVVISASDLPNVETVGKSDPYVVVGFLGSKKKTEVIKDELNPVWNEKFEWD 54
>SB_20559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1826 LIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHN-SSDRIKVRVWDED 1884
L + D SG SDPY V + + +TR PQ LNP WN F + D + + V+D D
Sbjct: 235 LKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTFTVKDMEQDVLCITVFDRD 294
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1826 LIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHN-SSDRIKVRVWDED 1884
L + D SG SDPY V + + +TR PQ LNP WN F + D + + V+D D
Sbjct: 944 LKSSDPSGMSDPYCEVSMGSQEHKTRVCPQTLNPKWNSTMTFTVKDMEQDVLCITVFDRD 1003
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 45.6 bits (103), Expect = 4e-04
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 16/124 (12%)
Query: 1825 GLIAKDKSGTSDPYVTVQVSKV--KKRTRTMPQELNPVWNEKFYFECHNSSDRIKVRVWD 1882
GL +K+ G PY + +KRT + NP WNE F + ++ + + + ++D
Sbjct: 6 GLTSKEHGGNISPYCIISTGNPHQRKRTSLLKDTHNPFWNEYFALDINSKTRELTIDIYD 65
Query: 1883 EDNDLKSKLRQKLTRESDDFLGQTIIEVRTLSGEMDVWYNLE--KRTDK-SAVSGAIRLH 1939
+ SDDFLGQ I+ + T++ + L RT+K VSG + L
Sbjct: 66 YER-----------TPSDDFLGQVIVPLSTVNRDQTCRLVLPILPRTNKCDYVSGELSLE 114
Query: 1940 INVE 1943
V+
Sbjct: 115 YLVD 118
Score = 33.1 bits (72), Expect = 2.3
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 1127 ELEKLDIDTDISNVDLFEEDTIDPNQSPASIFATIGDV--KKASITSDDEKSEGNKPYSA 1184
E K +++ ++ +V L E DT P S S A K+ TS DE + + Y A
Sbjct: 143 ESTKAEVEPELESVKL-EADTNGPPSSVRSFAAAYSYSLDKRYMETSLDELAFEIEAYEA 201
Query: 1185 SSQ------------EFAVSRALGKYRLRKSTSISDE-QMADISPPKLDKELHEQSNDDN 1231
S+ + A R + + ++T + +E Q P KL KEL + D
Sbjct: 202 ESRGETKPSDVIDETDEAAERLVTMDPVFETTEVVEEAQEPTPDPEKLQKELCSEEKSD- 260
Query: 1232 MTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGIQNKFQPRHQQSLEIPNKHD 1291
E K+ E VN+S E + E P +++ + +KF+ R + + ++ + D
Sbjct: 261 ----EAKLETVNKTEEVNTSEEPEASGTPE--PKLRTKKSFASKFKKRPKSTADMDKRED 314
Query: 1292 D 1292
+
Sbjct: 315 E 315
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 45.6 bits (103), Expect = 4e-04
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 1589 HNFVLWTATSPTYCYECEGLLWGIARQGVRCTECGVKCHE-KCKDLLNADC 1638
H+FV TS T+C C LLWGI QG +C+ C H+ C + + C
Sbjct: 240 HHFVSTHYTSTTFCNHCSNLLWGIGDQGYQCSICEFNVHKVGCLESIEEMC 290
>SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18)
Length = 453
Score = 44.8 bits (101), Expect = 7e-04
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 1589 HNFVLWTATSPTYCYECEGLLWGIARQGVRCTECGVKCHEKC 1630
H+F P +C C +WG+ QG++C CG+ H+KC
Sbjct: 169 HDFKTHDYKQPKWCDICGKFMWGLKGQGLKCATCGMNIHQKC 210
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 44.4 bits (100), Expect = 0.001
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 25/256 (9%)
Query: 1100 NTLPRDKSDDIDFHFARVSQMKKDNIQELEKLDIDTDISNVDLFEEDTIDPNQSPASIFA 1159
+ + D DD + +MKK+ ++ D DT++ + E++T +P Q
Sbjct: 27 SNISSDGDDDGGEKKEKRKKMKKEKERKGVPEDADTEMKKKERKEKETFEPEQKKKK--- 83
Query: 1160 TIGDVKKASITSDDEKSEGNKPYSASSQ---EFAVSRALGKYRLRKSTSISDEQMADISP 1216
KKA DD +G+ S + E + K R S+ SD+ +D+S
Sbjct: 84 ---KDKKAGKVRDDRARKGSDSEGGSDERKCEDRKDKTRKKKRKHDSSEDSDDNSSDVSA 140
Query: 1217 PKLD------KELH----EQSNDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSM 1266
K ++ H E S+ + + EK+++K E S E++ +E
Sbjct: 141 KKKQCKEERKRKRHKLSCESSSCEESSDSEKRLKKEKNKE--KQRDSSESSSDSEDDRKR 198
Query: 1267 QSSRGIQNKFQPRHQQSLEIPNKHDDDDSRXXXXXXXXXXXXXXXXXTEDSIDSEDEWYC 1326
+ + ++K Q S + + DD + R +E SIDSED+
Sbjct: 199 RKKKVKKDKKQKAKDSSESLSDSEDDRERR--KKKVKKEIKHKAKDSSESSIDSEDDRER 256
Query: 1327 YELRK--LEEMEHQSQ 1340
E +K +E +H+S+
Sbjct: 257 KERKKKNKKEKKHKSK 272
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 44.4 bits (100), Expect = 0.001
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 1830 DKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHNSSDRIKVRVWDEDNDLKS 1889
D G SDPYV + +K+T+ + LNPVW+E FE + + D+ LK
Sbjct: 16 DFRGESDPYVKLSFRGEEKKTKVIDDNLNPVWDEDNEFEWSLGGGTLSL-----DDTLKV 70
Query: 1890 KLRQKLTRESDDFLGQTIIEVRTLSGEMDVWYNLEKR---TDKS--AVSGAIRLHINVEI 1944
++ LGQ I ++ L D Y LEK D S A G++ L I +
Sbjct: 71 SVKDWDLCPPRKLLGQVTIALKELLKTKD--YALEKEYPLVDSSNRATPGSLNLRIEFRL 128
Query: 1945 KG 1946
G
Sbjct: 129 PG 130
Score = 33.1 bits (72), Expect = 2.3
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 1830 DKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFECHNSSDRIKVRVWDEDNDLKS 1889
D S +DPYV V S ++T Q L+P W++ F DR + +
Sbjct: 1271 DISPYTDPYVRVCFSNQSQKTEMRAQTLSPNWDQTLVFRQVELCDRWH-NIKRYTPSVVM 1329
Query: 1890 KLRQKLTRESDDFLGQTIIE 1909
++ K DDF+G+ +I+
Sbjct: 1330 EIYDKDPVGKDDFMGRCLIK 1349
>SB_3986| Best HMM Match : C2 (HMM E-Value=2.9e-31)
Length = 778
Score = 44.0 bits (99), Expect = 0.001
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 1834 TSDPYVTVQVSKVKKRTRTMPQELNPVWNEKF-YFECHNSSDRIKVRVWDEDNDLKSKLR 1892
TSDPY V+V K RT+T +PVW E F F + + +V+DE D+ K
Sbjct: 299 TSDPYCIVEVGAQKYRTKTKKSNCDPVWKETFEAFIDNTEGQELFCKVYDE--DIAGK-- 354
Query: 1893 QKLTRESDDFLGQTIIEVRTL--SGEMDVWYNLE 1924
D +G+ ++V + +G+ D+W +LE
Sbjct: 355 -------DTEIGEVDVQVASAFENGKTDLWLHLE 381
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 1583 ISSTTPHNFVLWTATSPTYCYECEGLLWG-IARQGVRCTECGVKCHEKCKDLLNADC 1638
I H F+ PT+C C +WG I +QG +C C + H +C + +C
Sbjct: 127 IHQINSHKFMATYLRQPTFCSHCNDFIWGVIGKQGYQCQVCKMNVHRRCHQNVANNC 183
>SB_2344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 43.6 bits (98), Expect = 0.002
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 20/110 (18%)
Query: 1814 ARYNVIPLGYNGLIAKDKSGTSDPYVTVQV----SKVKK-RTRTMPQELNPVWNEKFYF- 1867
+R +V+ GL D GTSDPYV + + SK K R+ T + LNPV+NE +
Sbjct: 16 SRLDVVLHDAKGLKPMDHGGTSDPYVKLHLLPGASKSNKLRSHTKYKTLNPVFNETLTYY 75
Query: 1868 ---ECHNSSDRIKVRVWDEDNDLKSKLRQKLTRESDDFLGQTIIEVRTLS 1914
E SS ++++V+DED T +DF+G+T I ++ L+
Sbjct: 76 GITEEEISSKTLRLQVFDED-----------TIGRNDFIGETSINLKLLN 114
>SB_27807| Best HMM Match : C2 (HMM E-Value=0)
Length = 405
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 1832 SGTSDPYVTVQV---SKVKKRTRTMPQELNPVWNEKFYFE 1868
SGTSDP+V + + K K TR + LNPVWNE F FE
Sbjct: 157 SGTSDPFVKIMLLPDKKHKLETRVKRKNLNPVWNEVFTFE 196
Score = 39.5 bits (88), Expect = 0.026
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 1815 RYNVIPLGYNGLIAKDKSGTSDPYVTVQVSKV-----KKRTRTMPQELNPVWNEKFYFE 1868
R V+ + N L A D +G+SDPYV + + KK+T + +PVWNE F F+
Sbjct: 272 RIIVVVMKANKLKAMDLTGSSDPYVKMYIMHKDRRLDKKKTTIKRRTRDPVWNESFIFD 330
>SB_40281| Best HMM Match : C2 (HMM E-Value=6.7e-39)
Length = 230
Score = 42.3 bits (95), Expect = 0.004
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 1813 KARYNVIPLGYNGLIAKDKSGTSDPYVTVQV-----SKVKKRTRTMPQELNPVWNEKFYF 1867
K V+ L AKD +G SDP+V + K K++T T+ + LNP WN F +
Sbjct: 92 KGELQVVIKEARNLPAKDANGFSDPFVKAYLLPDKGRKSKRKTPTIRKNLNPQWNFPFTY 151
Query: 1868 E---CHNSSDR-IKVRVWDED----NDLKSKLRQKL-TRES--DDFLGQTIIEVRTLSGE 1916
+ DR +++ VWD D ND +R + T++ DD GQ I + +
Sbjct: 152 DDVTLEELMDRSLELTVWDWDRGASNDFLGGVRLGMGTKQEKWDDAEGQEITAWQAMMDF 211
Query: 1917 MDVWYN 1922
+ W++
Sbjct: 212 PNEWHD 217
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 39.5 bits (88), Expect = 0.026
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 1180 KPYSASSQEFAVSRALG-KYRLRKSTSISDEQMADISPPKLDKELHEQSNDDNMTSKEKK 1238
KP A A+ A+ K L+ S+ + + +I DKE ++ D T++
Sbjct: 213 KPSIAPKPSLAIKPAISPKPTLKPKPSLQEIKQKEIRVTNSDKESNQTVLDPETTTE--- 269
Query: 1239 IRKPTTPEIVNSSVSEENTIYTERSPSMQS---SRGIQNKFQPRHQQSLEIPNKHD 1291
KP P +N YT PS+ + I +K+ P H Q +++ KHD
Sbjct: 270 --KPCPPPRNRKKKIIKNEAYTSLRPSLVTYLDKETISSKYLPSHTQEVQVTQKHD 323
>SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 38.3 bits (85), Expect = 0.061
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 1379 PMKETWKDITTFPSIEE---SVDSTKDHDQESDDDK-SYADTGSGETSGPDSPVVSGDEM 1434
P E K T PS ++ + + D D +S D S D+ S +S S S +E
Sbjct: 88 PGNEVEKGATEDPSAKKPRTDAEGSSDSDSDSSDSSGSDDDSSSSSSSSSSSSSSSSEET 147
Query: 1435 DDEYDMPPSPIPARRQ 1450
D+E + P +P P+R++
Sbjct: 148 DNETEQPATPAPSRQK 163
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 38.3 bits (85), Expect = 0.061
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 735 IDPYPPEPNYHAQTVVMSVANTNNKRTLTRANTMGVSESQYFQNGYKVS 783
I P+ P P Y QTV+MS+ + + L A+T G + F+ YKVS
Sbjct: 4701 ITPFSPPPAYEQQTVIMSLGPEHIHQNL-EADTFGTENPELFKEEYKVS 4748
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 38.3 bits (85), Expect = 0.061
Identities = 56/293 (19%), Positives = 105/293 (35%), Gaps = 23/293 (7%)
Query: 1183 SASSQEFAVSRALGKYRLRKSTSISDEQMAD---ISPPKLDKELHEQ---SNDDNMTSKE 1236
S+S +E V + K K +S D+ +D + P K K+ + S+DD+ + +E
Sbjct: 20 SSSDEEVKVKKDTKK--ATKGSSSEDDSSSDEEEVKPKKDAKKAATEDSSSDDDSSSDEE 77
Query: 1237 KKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGIQNKFQPRHQQSLEIPNKHDDDDSR 1296
K++K T SS ++++ E + ++ K S + + D+D+
Sbjct: 78 VKVKKDTKKATKGSSSEDDSSSDEEEVKPKKDAK----KAATEDSSSDDDSSGEDEDEKP 133
Query: 1297 XXXXXXXXXXXXXXXXXTEDSIDSEDEW---YCYELRKLEEMEHQSQLEADRHDTLXXXX 1353
+DS D +DE K + + +S E D D
Sbjct: 134 KKKVEKKTPTKQESSSEEDDSSDDKDEKPKKKADNKGKKTQAKQESSSEDDSSDEEDEKP 193
Query: 1354 XXXXXXXXXXXVLKEKMSFTKYD------ESPMKETWKDITTFPSIEESVDSTKDHDQES 1407
K++ S + D E P K+ + P+ +ES ++E
Sbjct: 194 KKKADNKGKKTQAKQESSSEEDDSSDEEEEKPKKKADDKVKKTPAKQESSSEDDSSNEEE 253
Query: 1408 DDDKSYADTGSGETSGPDSPVVSGDEMDD--EYDMPPSPIPARRQVPVQQDTT 1458
+ K AD +T D DD E + ++ P +Q+++
Sbjct: 254 EKPKKKADVKGKKTPAKQESSSGDDSSDDDEEEKSKKKAVSKEKKTPAKQESS 306
Score = 35.9 bits (79), Expect = 0.33
Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 15/329 (4%)
Query: 1010 SLSDPETSETEWSGGRSSAQSEDSDSVFSDSAHENNVFAKVASKPKQRKVNNQEIVEQQQ 1069
S SD E + + + S + DS + + AK A+ ++ E+ +
Sbjct: 20 SSSDEEVKVKKDTKKATKGSSSEDDSSSDEEEVKPKKDAKKAATEDSSSDDDSSSDEEVK 79
Query: 1070 LIQDLQE--KGIEFKDDDTXXXXXXXXKFPSNNTLPRDKSDDIDFHFARVSQMKKDNIQE 1127
+ +D ++ KG +DD + K + D S D D + K +++
Sbjct: 80 VKKDTKKATKGSSSEDDSSSDEEEVKPKKDAKKAATEDSSSDDDSSGEDEDEKPKKKVEK 139
Query: 1128 LEKLDIDTDISNVDLFEEDTIDPNQSPASIFATIGDVKKASITSDDEKSEGNKPYSASSQ 1187
++ D ++ P + + +++S D E KP +
Sbjct: 140 KTPTKQESSSEEDDSSDDKDEKPKKKADNKGKKTQAKQESSSEDDSSDEEDEKPKKKADN 199
Query: 1188 EFAVSRALGKYRLRKSTSISDEQ-----MADISPPKLDKELHEQSNDDNMTSKEKKIRKP 1242
+ ++A + + S +E+ AD K + S DD+ +E+K +K
Sbjct: 200 KGKKTQAKQESSSEEDDSSDEEEEKPKKKADDKVKKTPAKQESSSEDDSSNEEEEKPKKK 259
Query: 1243 T------TPEIVNSSVSEENTIYTERSPSMQSSRGIQNKFQPRHQQSLEIPNKHD--DDD 1294
TP SS ++++ E S + + + K + + S + + D D+D
Sbjct: 260 ADVKGKKTPAKQESSSGDDSSDDDEEEKSKKKAVSKEKKTPAKQESSSDDSSSDDSSDED 319
Query: 1295 SRXXXXXXXXXXXXXXXXXTEDSIDSEDE 1323
++ S DS E
Sbjct: 320 TKMPTKSKLKNGTKTKAKEESSSSDSSSE 348
Score = 33.1 bits (72), Expect = 2.3
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 10/218 (4%)
Query: 967 PVQEKSLKERIMSAQRRKKKYHLVASMSGLLQKARRKHQASHQSLSDPETSETEWSG--- 1023
P +++S E S+ + +K A G +A+++ + S SD E + +
Sbjct: 142 PTKQESSSEEDDSSDDKDEKPKKKADNKGKKTQAKQESSSEDDS-SDEEDEKPKKKADNK 200
Query: 1024 GRSSAQSEDSDSVFSDSAHENNVFAKVASKPKQRKVNNQEIVEQQQLIQDLQEKGIEFKD 1083
G+ + ++S S DS+ E K + K +K ++ + + +E+ + K
Sbjct: 201 GKKTQAKQESSSEEDDSSDEEEEKPKKKADDKVKKTPAKQESSSEDDSSNEEEEKPKKKA 260
Query: 1084 DDTXXXXXXXXKFPSNNTLPRDKSDDIDFHFARVSQMKKDNIQELEKLDIDTDISNVDLF 1143
D + S + D SDD + ++ + K+ ++ D S+ D
Sbjct: 261 DVKGKKTPAKQESSSGD----DSSDDDEEEKSKKKAVSKEKKTPAKQESSSDDSSSDDSS 316
Query: 1144 EEDTIDPNQSPASIFATIGDVKKASITSDDEKSEGNKP 1181
+EDT P +S T K+ S +S D SE P
Sbjct: 317 DEDTKMPTKSKLK-NGTKTKAKEES-SSSDSSSEDEPP 352
>SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 37.1 bits (82), Expect = 0.14
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 1117 VSQMKKDNIQELEKLDIDTDISNVDLFEEDTIDPNQSPASIFATIGDVKKASITSDDEKS 1176
+ + K D +E + D++ E + + + P + +T I+ DEK+
Sbjct: 67 IQEEKHDYFDHIED-PFEFDLNASSFHENHSENIMELPETGKSTSKKKNLTKISKRDEKA 125
Query: 1177 EGNKPYSASSQEFAVSRALGKYRLRKSTSISDEQMADISPPKLDKELHEQSNDD-NMTSK 1235
K AS + + A G+ R S+ Q +S D E+ +S + SK
Sbjct: 126 N-QKTTPASKRLKGKTVAKGERRQAAKVSMRSSQTRTLSTTLDDNEMTLKSETTKSKCSK 184
Query: 1236 E--KKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGIQNKFQPRHQQSL 1284
E K+I + + + V + +++T T +P+ S++GI+NK + H + L
Sbjct: 185 ECKKRINEKSNGKTVKENQFDDHT--TSPNPTTTSTKGIKNKGKAMHNEGL 233
>SB_2343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 37.1 bits (82), Expect = 0.14
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 1845 KVKKRTRTMPQELNPVWNEKFYFE-CHN--SSDRIKVRVWDEDNDLKSKLRQKLTRESDD 1901
K K+RT + LNP +NE+F ++ H+ + ++V VWD D +S+D
Sbjct: 56 KSKRRTNIRKKTLNPEFNEEFVYDIAHHELAKKSLEVTVWDYD-----------VGKSND 104
Query: 1902 FLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSG 1934
F+G I+ + + W + + +V+G
Sbjct: 105 FIGGVILNINAEGSALKHWQRVSEAAISFSVTG 137
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 36.7 bits (81), Expect = 0.19
Identities = 27/164 (16%), Positives = 78/164 (47%)
Query: 1119 QMKKDNIQELEKLDIDTDISNVDLFEEDTIDPNQSPASIFATIGDVKKASITSDDEKSEG 1178
+ + +N+ ++EK +T D+ E+ + + + + DVK + SD+ +S+
Sbjct: 373 EKRSENLSKMEKKLSETQEKLQDMEEKFSKEKRAWADEVESLETDVKSLQLISDESESKL 432
Query: 1179 NKPYSASSQEFAVSRALGKYRLRKSTSISDEQMADISPPKLDKELHEQSNDDNMTSKEKK 1238
+ S+ + +R L + + TS+ ++ +P K KE+ +++++ + E +
Sbjct: 433 REAQSSLREYREENRKLKRELEKFETSMDNKDNEFNAPAKTIKEVKKENSELVKRNTELE 492
Query: 1239 IRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGIQNKFQPRHQQ 1282
+ + E ++ S+ +E ++ E ++ + ++++ +Q
Sbjct: 493 EKLGSIDEKLSISLKKEFSVTEENERLLREKKALESRILDAEEQ 536
Score = 33.1 bits (72), Expect = 2.3
Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Query: 244 LSTIDQITVDKLHELDRLTSQLQNESREIRDLKTRLLTPEPKITKIDREIEAKALAEDEN 303
L +ID+ L + +T + + RE + L++R+L E +++ I A D+
Sbjct: 495 LGSIDEKLSISLKKEFSVTEENERLLREKKALESRILDAEEQVSSSKGMITALQAKLDDA 554
Query: 304 IINEQLKGVYSGGEGWGMNEMMKSFDDFMLNIPKDGTGRDKSPSRLSLTD-NVVAERSMD 362
+ + + K + + + E +K + ++ D RD+ LSL N + +
Sbjct: 555 LNSREAKSDWDSNRIYELEEKIKDLSKKLKDVESDLAERDRQIQNLSLEKVNESRDDEIT 614
Query: 363 YLQQNLSPRRK 373
L+ L +R+
Sbjct: 615 ELENELEEQRE 625
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 36.3 bits (80), Expect = 0.25
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 1532 RRKSIPLVSELTMAATK-RNAGLTSAVHRATLNDEELKM-HVYKKTLQALIYPISSTTP- 1588
R K + +E +A ++ +N L + + + E++K+ +V K L Y S
Sbjct: 859 RMKEANVTTERKLAESEAQNNSLREEIKKLKRDLEQMKVVNVQKGDLPFFTYQQQSRLDN 918
Query: 1589 ------HNFVLWTATSPTYCYECEGLLWGIARQGVRC 1619
H F + T T+PT C +C L+ G+ RQG C
Sbjct: 919 LEEPHAHKFSVRTFTTPTKCNQCTSLMIGLVRQGAIC 955
>SB_36579| Best HMM Match : C1_1 (HMM E-Value=0.00011)
Length = 633
Score = 35.9 bits (79), Expect = 0.33
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 1589 HNFVLWTATSPTYCYECEGLLWGIAR--QGVRCTECGVKCHEKCKDLLNADCLQRAAEKS 1646
H F+ PT C C+ LW + + V C C +KCH+ D A C+Q+ +
Sbjct: 520 HQFIPMHYHMPTNCDSCQKPLWHMFKPPPAVECRRCHMKCHKDHIDREEA-CIQKCNVNA 578
Query: 1647 SKHGAED 1653
A+D
Sbjct: 579 DLISAKD 585
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 35.5 bits (78), Expect = 0.43
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 1178 GNKPYSASSQEFAVSRALGKYR----LRKSTSISDEQMADISPPKLDKELHEQSN---DD 1230
G + Q A++RAL K L ++TS D + I LDK E+ N DD
Sbjct: 253 GAQMSGGQKQRIAIARALVKNPTLLILDEATSALDTESEKIVQAALDKSFEEEGNDDADD 312
Query: 1231 NMTSKEKKIRKPTTPEI-VNSSVSEENTIYTERSPSMQSSRGIQNKFQP 1278
+ T KE + + V SS E ER S+++SR + K P
Sbjct: 313 DPTEKETQAAVKFMRSVSVLSSDGEHEATALERKVSVRASRRLSLKRAP 361
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 35.5 bits (78), Expect = 0.43
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 1598 SPTYCYECEGLLWGIARQGVRCTECGVKCHEKCKDLLNADCLQRAA 1643
+P+ C +C+ ++ G C +CG+ CH++C L C + A
Sbjct: 184 APSRCRDCDSYVYF---NGAECEQCGLTCHKRCLARLTNKCSYKGA 226
>SB_6197| Best HMM Match : C2 (HMM E-Value=3.7e-24)
Length = 569
Score = 35.5 bits (78), Expect = 0.43
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 1826 LIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFE 1868
L+A D G +DPY V K + T T L P+W++ FE
Sbjct: 200 LLAADSDGLADPYARVVFQKQSQTTCTKYHTLCPMWDQTLIFE 242
>SB_21545| Best HMM Match : FerB (HMM E-Value=3.1e-30)
Length = 1142
Score = 35.1 bits (77), Expect = 0.57
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 1826 LIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEKFYFE 1868
L+A D G SDPY V T T+ + L P W++ F+
Sbjct: 356 LLASDPDGVSDPYARVVFGTRSSVTETLARTLCPTWDQTLIFD 398
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 35.1 bits (77), Expect = 0.57
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 953 RSHSLPSGVDNVEQPVQEKSLKERIMSAQRRKKKYHLVASMSGLLQKARRKHQASHQSLS 1012
RS S PS V ++ ++++ R S R+ KK S + +S S S
Sbjct: 971 RSRS-PSPVRRKDKDKEKRTSSTRGRSPTRKDKKDKPARRQSSSSSSSSSSSGSSSYSSS 1029
Query: 1013 DPETSETEWSGGRSSAQSEDSDSVFSDSAHENNVFAKVASKPKQRKVNNQEIVEQQQLIQ 1072
S + SG S+ S S S S S+ N+ AKV + K+ K ++E+V++ + ++
Sbjct: 1030 SSTGSSS--SGSSRSSSSSSSGSSASSSSSGNDA-AKVKKEVKEAKGESKEVVKESKEVK 1086
Query: 1073 D 1073
+
Sbjct: 1087 N 1087
Score = 31.1 bits (67), Expect = 9.3
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 1168 SITSDDEKSEGNKPYSASSQEFAVSRALGKYRLRKSTSISDE---QMADISPPKLDKELH 1224
S T D+K + + S+SS + S Y ST S + + S
Sbjct: 996 SPTRKDKKDKPARRQSSSSSSSSSSSGSSSYSSSSSTGSSSSGSSRSSSSSSSGSSASSS 1055
Query: 1225 EQSNDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSS 1269
ND KE K K + E+V S +N + P+++SS
Sbjct: 1056 SSGNDAAKVKKEVKEAKGESKEVVKESKEVKNKALPDSKPAVKSS 1100
>SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 35.1 bits (77), Expect = 0.57
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 1172 DDEKSEGNKPYSASSQEFAVSRALGKYRLRKSTSISDEQMA----DISPPKLDKELHEQS 1227
D ++S GN S++ ++ R+ G + + + +D+Q + +IS + + S
Sbjct: 11 DKQRSSGNMNISSNRNKYDKQRSSGNMNISSNRNKNDKQRSSGNMNISSNRNKYDKQRSS 70
Query: 1228 NDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGIQNKFQPRHQQSLEIP 1287
+ N++S K K + +N S + N S +M S N + R ++ I
Sbjct: 71 GNMNISSNRNKYDKQRSSGNMNISSNRNNDDKQRSSGNMNISSNRNNDDKQRSSGNMNIS 130
Query: 1288 NKHDDDDSR 1296
+ + +D +
Sbjct: 131 SNRNKNDKQ 139
Score = 31.5 bits (68), Expect = 7.0
Identities = 24/130 (18%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Query: 1171 SDDEKSEGNKPYSASSQEFAVSRALGKYRLRKSTSISDEQMA----DISPPKLDKELHEQ 1226
+D ++S GN S++ ++ R+ G + + + D+Q + +IS + + +
Sbjct: 46 NDKQRSSGNMNISSNRNKYDKQRSSGNMNISSNRNKYDKQRSSGNMNISSNRNNDDKQRS 105
Query: 1227 SNDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGIQNKFQPRHQQSLEI 1286
S + N++S K + +N S + S +M S + R ++ I
Sbjct: 106 SGNMNISSNRNNDDKQRSSGNMNISSNRNKNDKQRSSGNMNISSNRNKNDKQRSSGNMNI 165
Query: 1287 PNKHDDDDSR 1296
+ ++DD +
Sbjct: 166 SSNRNNDDKQ 175
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 35.1 bits (77), Expect = 0.57
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 1366 LKEKMSFTKYDESPMKETWKDITTFPSIEESVDSTKDHDQESDDDKSYADTGSGETSGPD 1425
L E K E +KE K+I + EE D+T+ HD K+ D+ S TS
Sbjct: 1744 LMESSFEDKSAEDELKEMTKEIESMAPTEEHEDTTQHHDHHKHRGKNAKDSESKGTS-KH 1802
Query: 1426 SPVVSGDEMDDEYDMPPSPIPARRQVPVQQDTTVGS 1461
+ + + PP +R+ P +++ GS
Sbjct: 1803 KDGDKKQQPKPQRERPPRFERGKRKAPADEESKKGS 1838
>SB_36731| Best HMM Match : F5_F8_type_C (HMM E-Value=0.74)
Length = 189
Score = 35.1 bits (77), Expect = 0.57
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 735 IDPYPPEPNYHAQTVVMSVANTNNKRTLTRANTMGVSESQYFQNGYK 781
I P+ P P Y QTV+MS+ + + L A+T G + F+ YK
Sbjct: 144 ITPFSPPPAYEQQTVIMSLGPEHIHQNL-EADTFGTENPELFKEEYK 189
>SB_59643| Best HMM Match : DUF1610 (HMM E-Value=3.3)
Length = 363
Score = 34.7 bits (76), Expect = 0.75
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 1392 SIEESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDD 1436
++++ VD D D + D+D D G G+ D GDE DD
Sbjct: 71 NVDDDVDDDNDDDGDEDEDGDEDDDGDGDEDDDDDVDDDGDEDDD 115
>SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33)
Length = 942
Score = 34.7 bits (76), Expect = 0.75
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 1387 ITTFPSIEESVDSTKDHDQESDDDKSYADTGSGETSGPD--SPVVSGDEMDDEYDMPPSP 1444
++ S+EE D D D+ES DD + SGE++G S +S E +P
Sbjct: 278 VSAAKSLEEETDDENDDDEESTDDSDESSDDSGESTGDSDTSGEISASPPIIEALLPEGN 337
Query: 1445 IPARRQVPVQQD 1456
+ A QV +
Sbjct: 338 LDAPSQVKAMDE 349
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 34.7 bits (76), Expect = 0.75
Identities = 22/98 (22%), Positives = 46/98 (46%)
Query: 247 IDQITVDKLHELDRLTSQLQNESREIRDLKTRLLTPEPKITKIDREIEAKALAEDENIIN 306
+ Q DK + ++ Q++ E ++ + + + + ++E + KAL +NIIN
Sbjct: 543 VRQDDTDKQDKQEKENKQVEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIIN 602
Query: 307 EQLKGVYSGGEGWGMNEMMKSFDDFMLNIPKDGTGRDK 344
E+L+ + + K DD M + ++ T RD+
Sbjct: 603 EELRMAAAEERKKEIENKKKEIDDEMRKLEEERTERDR 640
>SB_19234| Best HMM Match : Extensin_2 (HMM E-Value=0.23)
Length = 880
Score = 34.3 bits (75), Expect = 1.00
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 1367 KEKMSFTKYDESPMKETWKDITTFPSIEESVDSTKDHDQESDDDKSYADTGSGETSGPDS 1426
K+++ T D+SPM+E + + + E D+T D D ++ DD Y D+ E D
Sbjct: 130 KKQLGVTTSDKSPMQEASGETLSDGTCGEE-DTTAD-DDDAGDDNGYIDSDGDENDEYDE 187
Query: 1427 PVVSGDEMDDEYDM 1440
D++ ++ D+
Sbjct: 188 GCEGHDDVQEDDDV 201
>SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 34.3 bits (75), Expect = 1.00
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Query: 1126 QELEKLDIDTDISNVDLFEEDTIDPNQSPASIFATIGDVKKASITSDDEKSEGNKPYSAS 1185
+E + +ID D+S ED +P+Q S A G KK + E EG PY
Sbjct: 405 KERQGSEIDEDVS------EDG-EPSQRKRSKGAKKG-TKKPRVPKKKEGEEGYDPYDFE 456
Query: 1186 SQEFAVSRALGKYRLRKSTSISDEQMADISPPKLDKELHEQSNDDNMTSKEKKIRK 1241
S E + K + R+S+ S D + +D + + D T E+++ K
Sbjct: 457 SDEEETEEVVDKIKKRRSSRASAGDGTDDATESMDTS--DATQDTTATISEERLNK 510
>SB_18384| Best HMM Match : HSBP1 (HMM E-Value=1.5)
Length = 1072
Score = 34.3 bits (75), Expect = 1.00
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 1614 RQGVRCTECGVKCHEKCKDLLNADCLQRAAEKSSKHGAEDKANSIITAMKERMKQ 1668
RQ R KC KDL++ CLQ+A S++ E A +T KE +++
Sbjct: 518 RQVARNESLNTKCKLNNKDLVSLVCLQKAEWWSAQEAVEQLAEESLTVTKEEVEE 572
>SB_4929| Best HMM Match : C2 (HMM E-Value=2.4e-33)
Length = 567
Score = 34.3 bits (75), Expect = 1.00
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 1812 SKARYNVIPLGYNGLIAKDKSGTSDPYVTVQV-----SKVKKRTRTMPQELNPVWNEKFY 1866
SK +V + L KD G SDP+ + + K + +T + + LNP W+
Sbjct: 426 SKGELHVHIMEAKNLPGKDADGMSDPFCKITLLPDKKGKTRHKTAIIKRTLNPSWDYNLI 485
Query: 1867 FECHNSSDRIKVRVWD---EDNDLKSKLRQKLTRESDDFLGQTIIEVRTLSGEMD 1918
+E S + ++ RV + D+D+ S+ D+FLG + + T + E D
Sbjct: 486 YE-ELSQEELRQRVLEISIWDHDIASR---------DEFLGGLRLGLGTSANEWD 530
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 33.9 bits (74), Expect = 1.3
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 949 PKKHRSHSLPSGVDNVEQPVQEKSLKERIMSAQRRKKKYHLVASMSGLLQKARRKHQASH 1008
P++ RSHSL + P + +E ++ + S + + +H++
Sbjct: 222 PRRSRSHSLRHEDEEERSPSGGRHEREDSREPSSAEESSRTSSPHSRKKKSRKHRHRSRS 281
Query: 1009 QSLSDPETSETEWSGGRSSAQSEDSDSVFSDSAHENNVFAKVASKPKQRK 1058
SLS S+ + R ++S D S S S + +++ S+ +R+
Sbjct: 282 SSLSSRRRSKHKRKSKRDRSRSRDRSSSKSKSLRRSKKYSRSRSRSSERR 331
>SB_19229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 33.9 bits (74), Expect = 1.3
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 1812 SKARYNVIPLGYNGLIAKDKSGTSDPYVTVQV----SKVKKRTRTMPQE-LNPVWNEKFY 1866
S + + + L + D +G SDPYV + + K+KK+ T+ + LNP +NE F
Sbjct: 214 SSGKLQITIVEAKSLKSMDLTGYSDPYVKIALVQEGRKIKKKKTTVKKRTLNPYYNETFT 273
Query: 1867 F 1867
F
Sbjct: 274 F 274
>SB_16205| Best HMM Match : Neur_chan_memb (HMM E-Value=1e-12)
Length = 1286
Score = 33.9 bits (74), Expect = 1.3
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 1826 LIAKDKSGTSDPYVTVQVSKVKK-----RTRTMPQELNPVWNEKFYFECHNS-SDRIKVR 1879
L+ DK SDP + V K+ RT ++P L+P + E F E S R++
Sbjct: 40 LVQLDKFSKSDPLCVLSVKKLGHWTEFGRTESLPNNLSPKFVESFVLEPSASLYPRLRFS 99
Query: 1880 VWDEDNDLKSKLRQKLTRESDDFLGQTIIEVRTL 1913
++D N LR+ DF+G T I++ +L
Sbjct: 100 LYDLANFTSKDLRK------HDFIGCTEIDIDSL 127
>SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 33.5 bits (73), Expect = 1.7
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 19/85 (22%)
Query: 1836 DPYVTVQVSKVKKRTRTMPQE------LNPVWNEKFYFECH-NSSDRIKVRVWDEDNDLK 1888
DPYV V+V V T LNPVWNE+F H ++ V+DED
Sbjct: 702 DPYVQVEVHGVPADKATFTTHGLTDTTLNPVWNEEFQTIVHVPELAMVQFVVYDEDYGF- 760
Query: 1889 SKLRQKLTRESDDFLGQTIIEVRTL 1913
DDFLGQ +I +L
Sbjct: 761 -----------DDFLGQVVIPFESL 774
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 33.5 bits (73), Expect = 1.7
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 1164 VKKASITSDDEKSEGN--KPYSASSQEFAVSRALGKYRLRKSTSI-SDEQMADISPPKLD 1220
+K + SDDEK+E + + + S QE RA G R+ ++ + S+E+M +
Sbjct: 939 LKITDVGSDDEKAERSAVESHDGSGQE---ERASGDERISDASHVTSEEEMQASDAESEE 995
Query: 1221 KELHEQSNDDNMTSKEKK 1238
KE E+S+D S +K
Sbjct: 996 KEKDEESSDAEAPSSSRK 1013
>SB_59294| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.20004e-41)
Length = 851
Score = 33.5 bits (73), Expect = 1.7
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 964 VEQPVQEKSLKERIMSAQRRKKKYHLVASMSGLLQKARRKHQASHQSLSDPETSETEWSG 1023
V Q + + I A+ ++ + LVAS S RR +Q QS + E S
Sbjct: 421 VSQQISKTEQNVDIRDARLKRVRAALVASSSQHCHSRRRLNQEIRQSFAGAEAS---LGR 477
Query: 1024 GRSSAQSEDSDSVFSDSAHENNVFAKVASKPKQ 1056
GRS SDS +S + ++ FA V +Q
Sbjct: 478 GRSGHMESTSDSEYSCNVIDDPEFASVIRAAEQ 510
>SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42)
Length = 952
Score = 33.5 bits (73), Expect = 1.7
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 1588 PHNFVLWTATSPTYCYEC-EGLLWGIARQGVRCTECGVKCHEKCKDLLNADC 1638
PH FV P C C + + +G RQ +C EC CH KC L C
Sbjct: 336 PHRFVNVLNMHPVKCAVCLDSVHFG--RQSSKCAECDSVCHIKCCPNLPHTC 385
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 33.5 bits (73), Expect = 1.7
Identities = 50/261 (19%), Positives = 99/261 (37%), Gaps = 13/261 (4%)
Query: 1039 DSAHENNVFAKVASKPKQRKVNNQEIVEQQQLIQDLQEKGIEFKDDDTXXXXXXXXKFPS 1098
D +NNVF + SKP R+ + + E +Q ++ ++ KD +
Sbjct: 862 DGRSKNNVFTVLMSKPTSRQESQRSQAEVAHQLQ--TDENVDKKDIKKVEVSIIESPSTA 919
Query: 1099 NNTLPRDKSDDIDF-HFARVSQMKKDNIQELEKLDIDTDISNVDLFEEDTIDPNQSPASI 1157
D DD + S MK N +L + S+ ++ + T P + +
Sbjct: 920 KCVDSADLEDDTGVSNTTEKSSMKGPNAFKLMMQKSRSPTSDKEVTKNVTAKPAEKKFKL 979
Query: 1158 FATIGDVK-KASITSDD----EKSEGNKPYSASSQEFAVSRALGKYRLRKSTSISDEQMA 1212
+ I DD E GNK Y ++ +++ + RK+ + E+ +
Sbjct: 980 NICYSKKRTNFEIEDDDIFTGEIIGGNKKYKSADANSSINSKGRRGTSRKAD--NTEKCS 1037
Query: 1213 DISPPKLDKELHEQSNDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGI 1272
D + + + N +SK+ KI+ + N S+ + +Y S ++ S
Sbjct: 1038 DEGVDDNGGSMGYNTTNPNDSSKKTKIKNKNVKK-QNESLDAKEPVYISDSSNLSSPNSY 1096
Query: 1273 QNKFQPRHQQSLEIPNKHDDD 1293
Q + ++S++ K + D
Sbjct: 1097 Q--IVGKKEKSVKRKRKREGD 1115
>SB_22915| Best HMM Match : DEAD_2 (HMM E-Value=1.9e-39)
Length = 418
Score = 33.5 bits (73), Expect = 1.7
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 1172 DDEKSEGNKPYSASSQEFAVSRALGKYRLRKSTSISDEQMADISPPKLDKELHEQSNDDN 1231
DD+ + KP + + + K RKS S +++ D PPK + EL + +
Sbjct: 78 DDDTDDDFKPPLKRFRTPGPIQPVSKLSERKSQSSGNKEQMDCDPPKWNMELTRNDSSSS 137
Query: 1232 MTSKE 1236
TSKE
Sbjct: 138 ETSKE 142
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 33.5 bits (73), Expect = 1.7
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 233 ISERDLVHLSTLSTIDQITVDKLHELDRLTSQLQNESREIRDLKTRLLTPEPKITKIDRE 292
+S+RD LS + +D E + +TS+L+ EI +LKT + E ++ + E
Sbjct: 83 VSKRDETVLSLQAELDATQ----QEYESVTSELRGRENEIAELKTSIGRLESELRSLKSE 138
Query: 293 IE--AKALAEDENIINEQLK 310
++ ++ ++EDE+ I+ QLK
Sbjct: 139 LQNSSEKISEDEHEIS-QLK 157
>SB_40384| Best HMM Match : Filament (HMM E-Value=0.76)
Length = 563
Score = 33.1 bits (72), Expect = 2.3
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 245 STIDQITVDKLHELDRLTSQLQNESREIRDLKTRLL-TPEPKITKIDR-EIEAKALAEDE 302
S +Q T DK + L QL+ + EI DL+ RL+ + K + D+ E++ L +
Sbjct: 73 SQYEQQTTDKKEIVSFLKKQLEQRADEIADLQDRLIGLQQAKDAEKDQXEVQLATLRTEM 132
Query: 303 NIINEQL--KGVYSGGEGWGMNEMMKSFDDFMLNIPK 337
I +QL + + GG+ + E +D M K
Sbjct: 133 QEIKDQLTSENMVLGGKLASLEEFRVQKEDLMAKFAK 169
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 33.1 bits (72), Expect = 2.3
Identities = 47/255 (18%), Positives = 99/255 (38%), Gaps = 11/255 (4%)
Query: 983 RKKKYHLVASMSGLLQKARRKHQASHQSLSDPETSETEWSGGRSSAQSEDSDSVFSDSAH 1042
+KK+ H S + +K R+K + ++ D E + A+ E+ +
Sbjct: 400 KKKRSHSKTSSTTDEEKERKKSETKNKDSEDEEKERK-----KREAEEEEERRREEEERR 454
Query: 1043 ENNVFAKVASKPKQRKVNNQEIVEQQQLIQDLQEKGIEFKDDDTXXXXXXXXKFPSNNTL 1102
E + + KQR+ ++ E+++ ++ +E+ + K+++ K
Sbjct: 455 EEEERKREEEERKQREEEEKKREEEERKQREEEERKQKEKEEEKKRKEEER-KHKEEEEK 513
Query: 1103 PRDKSDDIDFHFARVSQMKKDNIQELEKLD-IDTDISNVDLFEEDTIDPNQSPASIFATI 1161
++S D + R + ++ +E E+ + ++ S + E+ P
Sbjct: 514 KTEESYDDSWRGRRARRKAEEERKERERRERLEKKHSEPEKKTEEP--PKVVVEPTVEKE 571
Query: 1162 GDVKKASITSDDEKSEGNKPYSASSQEFAVSRALGKYRLRKSTSISDEQMADISPPKLDK 1221
VK S +++E + + QE A RA + RLR++TS
Sbjct: 572 PAVKVESEKTEEEPLDDEAKREKARQERAAKRAERRARLREATSEESGDKGQSDSSDRSS 631
Query: 1222 ELHEQSNDDNMTSKE 1236
HE+S D +SK+
Sbjct: 632 RRHEES--DTSSSKD 644
>SB_5939| Best HMM Match : BAH (HMM E-Value=7.9e-18)
Length = 1086
Score = 33.1 bits (72), Expect = 2.3
Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 4/162 (2%)
Query: 948 LPKKHRSHSLPSGVDNVEQPVQEKSLKERIMSAQRRK--KKYHLVASMSGLLQKARRKHQ 1005
LPK + S G + K+ K++ ++ K K+ H A +S RRK
Sbjct: 579 LPKIGKPPSPSEGSTSSSGSTANKA-KDKKGKGKKNKILKRSHEPAPISPANNSKRRKSN 637
Query: 1006 ASHQSLSDPETSETEWSGGRSSAQSEDSDSVFSDSAHENNVFAKVASKPKQRKVNNQEIV 1065
S + D + + +GGR S E + +A N+ F +V + R ++V
Sbjct: 638 DSDDDIRDDVSESSSATGGRDSTLREFDERSECSNASVNDEFKRVGPGEENRSCARTDVV 697
Query: 1066 EQQQLIQDLQEKGIEFKDDDTXXXXXXXXKFPSNNTLPRDKS 1107
+ + ++G + T + +N+ R S
Sbjct: 698 YEHP-ERPKPKEGPRSSESSTANSTATRTEASESNSADRQSS 738
>SB_59658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 33.1 bits (72), Expect = 2.3
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 1886 DLKSKLRQKLTRESDDFLGQTIIEVRTLSGE-MDVWYNLEKRTDKSAVSGAIRLHINV 1942
D+ R DDFLG I V+++ + +D W+ L+ ++ K VSG R+ +++
Sbjct: 5 DVVQSARATDNENIDDFLGYLEIPVKSVPVDGIDQWFILQSKSSKCRVSGECRVKVSL 62
>SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1665
Score = 33.1 bits (72), Expect = 2.3
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 1830 DKSGTSDPYVTVQVSK--VKKRTRTMPQELNPVWNEKFYFECHNSSD-RIKVRVWDED 1884
D +G +DPY+ V + K V+ R + ++LNP + F FE D + V ++D D
Sbjct: 1366 DVNGKADPYLVVNLGKHRVRDRDNYVSKQLNPTFGRCFEFEAIIPMDSMLTVGIYDWD 1423
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 33.1 bits (72), Expect = 2.3
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 958 PSGVDNVEQPVQEKSLKERIMSAQRRKKKYHLVASMSGLLQKARRKHQASHQSLSDPETS 1017
PS ++ + Q + K+R +RRK + +K + K + + +S SD +S
Sbjct: 385 PSPMEEERRQSQRATSKQRTNPDRRRKSSPPSASEKDRNQRKDKAKREPTPESSSD--SS 442
Query: 1018 ETEWSGGRSSAQSEDSDSVFSDSAHENNVFAKVASKPKQ 1056
+ + S ++SED S S+SA EN + K Q
Sbjct: 443 DDSSNDSDSGSESEDESS--SESAEENTKISSSVKKGLQ 479
Score = 31.5 bits (68), Expect = 7.0
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 1391 PSIEESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDE---MDDEYDMPPSPIPA 1447
P+ E S DS+ D +SD D S E++ ++ + S + + + D P P PA
Sbjct: 433 PTPESSSDSSDDSSNDSDSGSESEDESSSESAEENTKISSSVKKGLQNGDIDSKPRPSPA 492
Query: 1448 RRQ 1450
R+
Sbjct: 493 VRE 495
>SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27)
Length = 468
Score = 33.1 bits (72), Expect = 2.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 1368 EKMSFTKYDESPMKETWKDITTFPSIEESVDSTKDHDQESDDDKSYADTGSGETSGP--D 1425
E+ TK E+ K+ + D +++ D +DHD E D+ + D GE S P D
Sbjct: 367 ERKEETKVTEN--KQVFIDGKEVEALKPPGDEDEDHDGEKSDEADHRDEADGEGSSPTAD 424
Query: 1426 SP 1427
SP
Sbjct: 425 SP 426
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 33.1 bits (72), Expect = 2.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 1394 EESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEYD 1439
+E D K D++ +DDK + SGE+ D GD+ DDE D
Sbjct: 173 DEKKDDDKKVDEKKEDDKKNDSSASGESEDSD----DGDDEDDEED 214
>SB_15459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 33.1 bits (72), Expect = 2.3
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 1202 KSTSISDEQ-MADISPPKLDKELHEQSNDDNMTSKEKKIRKPTT-PEIVNSSVSEENTIY 1259
K SDEQ DI+ DK + S +N S + R P T EI VS E+
Sbjct: 170 KPLESSDEQGEEDIARKAADKGYNSSSTKENAVSTPTEYRMPVTCEEIPAEYVSRESNNS 229
Query: 1260 TERSPSMQSSRGIQNKFQPRHQQSLEIPNKHDDD 1293
+ S +G+ N F S ++ N HD +
Sbjct: 230 RKDEKSAAEDQGV-NCFTKSGAGSKQMANVHDSE 262
>SB_7686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 33.1 bits (72), Expect = 2.3
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 1390 FPSIEESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEYDM 1440
FP ++ D D D + DDD D + D V D+ DD+ D+
Sbjct: 7 FPDDDDDDDGDDDDDDDDDDDDDDDDDDDDDVDDDDKDVGDDDDDDDDEDV 57
>SB_7181| Best HMM Match : C2 (HMM E-Value=1.2e-15)
Length = 630
Score = 33.1 bits (72), Expect = 2.3
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 1830 DKSGTSDPYVTVQVSKV---KKRTRTMPQELNPVWNEKFYFECHNSSDRIKVRVWDEDND 1886
D T DPYV + + K +T+ M NP W+E F F + I E +
Sbjct: 347 DLIDTPDPYVKIHIPTAPNGKAQTKVMDDNPNPEWHETFEFLLDPDRENIMEITLMESDL 406
Query: 1887 LKSKLRQKLTRESDDFLGQTIIE 1909
+ + K T +D +T +E
Sbjct: 407 VSDDILDKHTFRLNDLERETRVE 429
>SB_53568| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.61)
Length = 375
Score = 32.7 bits (71), Expect = 3.0
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 1376 DESPMKETWKDITTFPSIEESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDE 1433
DE+ + + + P IEES T+D D + DDD+ D G D GDE
Sbjct: 26 DETTLVDGAPPVPKMPGIEESEVGTEDIDDDDDDDEK--DEGYENDDDDDDEDEDGDE 81
>SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56)
Length = 697
Score = 32.7 bits (71), Expect = 3.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 1220 DKELHEQSNDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRG 1271
DKE +D+ + E + K T E N S + ENT TER + S G
Sbjct: 87 DKEDSSSGDDEGENTPENMLLKATQQEPSNGSRNNENTKTTERKSDVSDSLG 138
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 32.7 bits (71), Expect = 3.0
Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 8/131 (6%)
Query: 1829 KDKSGTSDPYVTVQVSKVK--KRTRTMPQELNPVWNEKFYFECHNSSDRIK-VRVWDEDN 1885
+D G +DPYV VQ+ K K + + P LNP++ + + ++ +R W E+
Sbjct: 1736 QDPGGLADPYVVVQLGKKKLDNKDQYKPNTLNPIFGNSGPNQWRDHKRPMELLREWCEET 1795
Query: 1886 DLKSKLRQKLTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHINVEIK 1945
+ K K T+ D + ++ R ++D + + ++ + GA + + +
Sbjct: 1796 EKNFKF-YKGTK--DGTPDRIVVGYRVY--QLDEFEDFDEENKPNEHLGAKHQRLALHVL 1850
Query: 1946 GEEKVAPYHVQ 1956
+ + P HV+
Sbjct: 1851 NQLEFIPEHVE 1861
>SB_56887| Best HMM Match : TolA (HMM E-Value=0.66)
Length = 404
Score = 32.7 bits (71), Expect = 3.0
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 14/201 (6%)
Query: 1060 NNQEIVEQQQLIQDLQEKGIEFKDDDTXXXXXXXXKFPSNNTLPR--DKSDDIDFHFARV 1117
N +E E Q+ + K I +DD+ K S+ PR ++S + +
Sbjct: 110 NEEENPENQETFNVIITK-INTEDDEKDESRGE--KVDSSTQTPRGDEESKNQETDGEDK 166
Query: 1118 SQMKKDNIQELEKLDIDTDISNVDLFEEDTIDPNQSPASIFATIGDVKKASITSDDEKSE 1177
+ KD E K D+ D F+ED D ++ T D K +D+
Sbjct: 167 DEASKDEKDEDPKEDVAAKKYEDDQFDEDD-DDDKKDDDDDKTDDDDDKKDAEKEDKDES 225
Query: 1178 GNKPYSASSQEFAVSRALGKYRLRKSTSISDEQMADISPPKLDKELHEQSNDDNMTSKEK 1237
GN+ S+SS + S + E+ AD K DK+ E +D E
Sbjct: 226 GNESDSSSSSSSSSSSS------SDDDDSDHEKDADDDDEKKDKD--EYKDDFESEKDEG 277
Query: 1238 KIRKPTTPEIVNSSVSEENTI 1258
K ++P E V +E +
Sbjct: 278 KEKEPAEAEEVIEDATEPKEV 298
>SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07)
Length = 322
Score = 32.7 bits (71), Expect = 3.0
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 1207 SDEQMADISPPKLDKELHEQSNDDNMTSKEKKIRKPTTPEI--VNSSVSEENTIYTERSP 1264
+D+++ I + E E+S+DD E IR P E+ S+ E YTE +
Sbjct: 190 NDDELLPIEESSIPTEDSEESDDDTNRRYEPSIR-PNIDELRRWRQSMEESAVDYTETTR 248
Query: 1265 SMQSSRGIQ 1273
+MQS+ G +
Sbjct: 249 AMQSTSGAE 257
>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
Length = 1019
Score = 32.7 bits (71), Expect = 3.0
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 1163 DVKKASITSDDEKSEGNKPYSASSQEFAVSRALGKY-RLRKSTSISDEQMADIS---PPK 1218
D +K+ I+ D SE N S++ SRA+ R +S S + + S PP
Sbjct: 171 DDQKSKISEDFRSSERNGDADRGSRDKPDSRAMSNEGRKSRSYEGSPSETSPYSRGYPPT 230
Query: 1219 LDKELHEQSNDDNMTSK-EKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGI 1272
+ EQS D ++SK E + P +S + EN + + S+ GI
Sbjct: 231 THRSYSEQSTDPRVSSKSEYSWADHSRPPSEHSRLGSENPHSVSENSRVVSTAGI 285
>SB_3618| Best HMM Match : C2 (HMM E-Value=4.8e-23)
Length = 486
Score = 32.7 bits (71), Expect = 3.0
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 13/99 (13%)
Query: 1832 SGTSDPYVTVQVSKVKKRTRTMPQ-----ELNPVWNEKFYFECHNSSDRIKVRVWDEDND 1886
SGT+DPYV V + + T+ LNP W + + S +++K +
Sbjct: 44 SGTADPYVLVAIQPDWGNSGTLKSTIIQGTLNPTWPFGEIYRFNLSPEQLK------ETK 97
Query: 1887 LKSKLRQKLTRESDDFLGQTIIEV--RTLSGEMDVWYNL 1923
L L DDFLGQ I++ S WY L
Sbjct: 98 LSVHLYDNDPEGEDDFLGQVTIDLSKNDFSKVYTTWYRL 136
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 32.7 bits (71), Expect = 3.0
Identities = 50/244 (20%), Positives = 90/244 (36%), Gaps = 12/244 (4%)
Query: 1012 SDPETSETEWSGGRSSAQSEDSDSVFSDSAHENNVFAKVASKPKQRKVNNQEIVEQQQLI 1071
SD TS+ S S++ + SD+ SD+++ +N + ++ +K N+
Sbjct: 200 SDNSTSDNSTSDN-SNSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSNPNNSNTDNS 258
Query: 1072 QDLQEKGIEFKDDDTXXXXXXXXKFPSNNTLPRDKSDDIDFHFARVSQMKKDNIQELEKL 1131
+ + D S++ D S + D + S +
Sbjct: 259 SSADNSNPDNSNSDNSNTDNSNSDNSSSDNSNSDNS-NTDNSTSNNSNPENSTSDNSNSN 317
Query: 1132 DIDTDISNVDLFEEDTIDPNQSPA----SIFATIGDVKKASITSDDEKSEGNKPYSASSQ 1187
+ + D SN D + D + N S + S +T + ++TSD+ ++ + ++SS
Sbjct: 318 NSNQDNSNSDDSKPDNSNTNNSNSDNSNSDNSTSDNSNPDNLTSDNPNTDNSGSDNSSSG 377
Query: 1188 EFAVSRALGKYRLRKSTSISDEQMADISPPKLDKELHEQSNDDNMTSKEKKIRKPTTPEI 1247
F + S SD +D S D + S DN SK+ K P
Sbjct: 378 NFNSDNSTSD-NSNSDNSTSDNSSSDNS--NSDNSYTDNSTSDN--SKKDK-SNPNNSNT 431
Query: 1248 VNSS 1251
NSS
Sbjct: 432 DNSS 435
Score = 32.3 bits (70), Expect = 4.0
Identities = 46/248 (18%), Positives = 87/248 (35%), Gaps = 21/248 (8%)
Query: 1012 SDPETSETEWSGGRSSAQ-SEDSDSVFSDSAHENNVFAKVASKPKQRKVNN-QEIVEQQQ 1069
S+PE S ++ S +S Q + +SD D+++ NN + ++ N+ +
Sbjct: 118 SNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDN 177
Query: 1070 LIQDLQEKGIEFKDDDTXXXXXXXXKFPSNNTLPRDKSDDIDFHFARVSQMKKDNIQELE 1129
L D D+ + N+T SD+ + DN
Sbjct: 178 LTSDNSNTDNSGSDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNSY--- 234
Query: 1130 KLDIDTDISNVDLFEEDTIDPNQSPASIFATIGDVKKASITSDDEKSEGNKPYSASSQEF 1189
TD S D ++D +PN S ++ + + SD+ ++ + ++SS
Sbjct: 235 -----TDNSTSDNSKKDNSNPNNSNTDNSSSADNSNPDNSNSDNSNTDNSNSDNSSSDNS 289
Query: 1190 AVSRALGKYRLRKSTSISDEQMADISPPKLDKELHEQSNDDNMTSKEKKIRKPTTPEIVN 1249
S +D ++ S P+ + SN+ N + KP N
Sbjct: 290 -----------NSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNN 338
Query: 1250 SSVSEENT 1257
S+ N+
Sbjct: 339 SNSDNSNS 346
>SB_1955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 32.7 bits (71), Expect = 3.0
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 1416 TGSGETSGPDSPVVSGDEMDDEYDMPPSPIPARRQVPVQQDTTVGSKWKLLKALKD 1471
T SG+ S P + S E +D P I +R+V + T G K +K +KD
Sbjct: 55 TTSGQPSTPIANEGSSQEKEDSLSSPSKKIDRKREVDQENTETKGLKLNKVKQIKD 110
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 32.3 bits (70), Expect = 4.0
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 245 STIDQITVDKLHELDRLTSQLQNESREIRDLKTRLLTPEPKITKIDREIEAKALAEDENI 304
S ++ + V K E D L S + +E +L L + ++T+++RE+EA ++ +I
Sbjct: 812 SLLEDLKVKKTSEEDELKSHQEAIQKEKNNLAVELADFKARVTQLERELEAYKKSQKYDI 871
Query: 305 I 305
I
Sbjct: 872 I 872
>SB_20440| Best HMM Match : SRP-alpha_N (HMM E-Value=1.4)
Length = 526
Score = 32.3 bits (70), Expect = 4.0
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 950 KKHRSHSLPSGVD----NVEQPVQEKSLKERIMSAQRRKKKYHLVASMSGLLQKARRKHQ 1005
K+ R+ + SG+D ++ ++E KE +A +KK A+ + +R
Sbjct: 385 KRIRAEEMASGIDCELLEKDRLIEELCEKEESQTANNKKKTEDKAAAEDVRKKAMQRMGG 444
Query: 1006 ASHQSLSDPETSETEWSGGRSSAQS 1030
++ +D E+ E SGG+ S +S
Sbjct: 445 GKRKAKADGESDEASTSGGKKSRRS 469
>SB_45970| Best HMM Match : rve (HMM E-Value=1.7e-11)
Length = 717
Score = 32.3 bits (70), Expect = 4.0
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 1375 YDESPMKETWKDITTFPSIEESVDSTKDHDQESDDDKSYADTGSGE 1420
Y+ +P K W+ +++ S +E D D+E DDD + SG+
Sbjct: 373 YNRAPAKR-WRHLSSAKSTDEPQSQDDDDDEEEDDDGATEKNSSGQ 417
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 32.3 bits (70), Expect = 4.0
Identities = 47/300 (15%), Positives = 109/300 (36%), Gaps = 6/300 (2%)
Query: 975 ERIMSAQRRKKKYHLVASMSGLLQKARRKHQASHQSLSDPETSETEWSGGRSSAQSEDSD 1034
ER + ++++K + S S L + S + + E + G RS +D +
Sbjct: 128 ERSLDGEQKEKGMGSIVS-STLDDMGSSVAKDSDEEKRKSDDDENKEGGVRSKRVDQDQE 186
Query: 1035 SVFSDSAHENNVFAKVASKPKQRKVNNQEIVEQQQLIQDLQEKGIEFKDDDTXXXXXXXX 1094
+ E +S+ + + ++ Q + +++ + + D+
Sbjct: 187 KAKEEGKAEKEAERNDSSEDENK--DSDAKAAQTKEVEEEEVRSNRGNLDEQSTEANAQT 244
Query: 1095 KFPSNNTLPRDKSDDIDFHFARVSQMKKDNIQELEKLDIDTDISNVDLFEEDTIDPNQSP 1154
K + R ++D + D + + D D D + D ++ D ++S
Sbjct: 245 KEVEEEEV-RSNRGNLDEQSTEANGNNTDTHSDDSEKDSDDDEKSADTKNDEISDSDKSD 303
Query: 1155 ASIFATIGDVKKASITSDDEKSEGNKPYSASSQEFAVSRALGKYRLRKSTSISDEQMADI 1214
A S TS+ E + ++EF + + + K L + TS S++ + +
Sbjct: 304 TEKDADSDSENDGSGTSESEYLSSEESDEDVNEEFDLEKYIRK--LERGTSSSEDDASSV 361
Query: 1215 SPPKLDKELHEQSNDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGIQN 1274
+ KL ++ + + +++ + E +S E E+ P + S Q+
Sbjct: 362 TSEKLINRAVLRATKNFRRANVDTVKQNSDSESSDSEPEVEPKPKKEKPPKKEQSGSEQS 421
>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2141
Score = 32.3 bits (70), Expect = 4.0
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 1398 DSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEYD 1439
D D D + DDD D G G+ D DE DD+ D
Sbjct: 2061 DDDDDDDDDDDDDDGDGDDGDGDDDDDDDDDDDDDEDDDDDD 2102
>SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 32.3 bits (70), Expect = 4.0
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 1394 EESVDSTKDHDQESDDDKSYADTGSGETSGPDSPV-VSGDEMDDEYDMPPSP 1444
++S + + D D+E + +S D + + S +S V + GDE DDE + P P
Sbjct: 109 DDSGEESGDEDEEKTESESDDDDKTEKYSDDESDVSMDGDESDDEEEGPHKP 160
>SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17)
Length = 809
Score = 31.9 bits (69), Expect = 5.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 1394 EESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEYD 1439
++S D D D + DDD D G G+ G D+ V D+ DD+ D
Sbjct: 486 DDSYDDDDD-DDDDDDDGDDDDDGGGDNGGHDNDV--NDDSDDDDD 528
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 31.9 bits (69), Expect = 5.3
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 1165 KKASITSDDEKSEGNK-PYSASSQEFAV---SRALG-KYRLRKSTSISDEQMADISPPKL 1219
KK S SDD+ + +S S F V R L + + + SD++ D S
Sbjct: 909 KKGSKGSDDDDDDAFAVDFSDSDDSFGVPVVKRTLAARAKAPSKFNFSDDEDEDDSFKSK 968
Query: 1220 DKELHEQSNDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGIQNK 1275
+ + + ND + + K ++KPT P +S V + + SP S + NK
Sbjct: 969 EDDGSDDDNDQDF-AVTKVVKKPTPPVDSSSDVVATRDLIEKLSPVKASKKTATNK 1023
>SB_56067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 31.9 bits (69), Expect = 5.3
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 1102 LPRDKSDDIDFHFARVSQMKKDNIQELEKLDIDTDISNVDLFEEDTIDPNQSPASIFATI 1161
L D + +FH ++K+D +QE D DTD + D ++D D N+ +
Sbjct: 76 LEPDNATCTEFHSVLAEKIKQDEVQE----DTDTDSDDDDDDDDDDDDDNEDSSE----E 127
Query: 1162 GDVKKASITSDDEKSE 1177
GD ++ +SDD++ +
Sbjct: 128 GDDEENEESSDDDEED 143
>SB_50605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 31.9 bits (69), Expect = 5.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 1386 DITTFPSIEESVDSTKDHDQESDDDKSYADT---GSGETSGPDSPVVSGDEMDDEYD 1439
D+ +++ D+ D D+ DDD++ ADT G+ + G V D D+ D
Sbjct: 301 DVAVVVGVDDEEDNKDDDDENDDDDENDADTVDDGNNDRDGDSDGVSVVDNNKDDTD 357
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 31.9 bits (69), Expect = 5.3
Identities = 46/257 (17%), Positives = 99/257 (38%), Gaps = 4/257 (1%)
Query: 965 EQPVQEKSLKERIMSAQRRKKKYHLVASMSGLLQKARRKHQASHQSLSDPETSETEWSGG 1024
E+ +E+ +E + + +V G+ ++ + SD E++E++ S
Sbjct: 48 EEQTEEEEEEEEKEEGKEEDGEEEVVTDERGISSSKDESDESDESNESD-ESNESDKSN- 105
Query: 1025 RSSAQSEDSDSVFSDSAHENNVFAKVASKPKQRKVNNQEIVEQQQLIQDLQEKGIEFKDD 1084
S +E +S SD ++E++ + + K N + + + E + +
Sbjct: 106 ESDESNESDESNESDESNESDKSNESDKSNESDKSNESDKRNESDESDEDDESNGSDESN 165
Query: 1085 DTXXXXXXXXKFPSNNTLPRDKSDDIDFHFARVSQMKKDNIQELEKLDIDTDISNVDLFE 1144
++ S+ + D+S++ D + D ++ + ++D SN
Sbjct: 166 ESDESNGSDESNGSDESNESDESNESDESNESDESNESDESNGSDESN-ESDESNESDES 224
Query: 1145 EDTIDPNQSPASIFATIGDVKKASITSDDEKSEGNKPYSASSQEFAVSRALGKYRLRKST 1204
+ + N+S S + + S SD E E N+ A + +R+ R K+
Sbjct: 225 NGSDESNESDESNESDESNGSDESYESD-ESDESNESGLAVTDMLVTTRSGRTCRTWKAR 283
Query: 1205 SISDEQMADISPPKLDK 1221
++ EQ P LDK
Sbjct: 284 ALYKEQSKFAEPKLLDK 300
>SB_21820| Best HMM Match : DUF622 (HMM E-Value=2.7)
Length = 472
Score = 31.9 bits (69), Expect = 5.3
Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 1367 KEKMSFTKYDESPMKETWKDITTFPSIEESVD-STKDHDQESDD-DKSYAD 1415
++KM+ K D+S E K + T PS+ +++ +T+D+D+++D+ DK + D
Sbjct: 225 RKKMTQEKDDKSNSSENPKLVATSPSMAQTLGRTTRDNDKDTDNMDKGHDD 275
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 31.9 bits (69), Expect = 5.3
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 249 QITVDKLHELDRLTSQLQNESREIRDLKTRLLTPEPKITKI--DREIEAKALAEDENIIN 306
++T +KL +L L N+ + ++ K RL P ++ + D +E D+ ++N
Sbjct: 507 ELTHNKLEKLSASLGLL-NKLKCLKFAKNRLRFPPEEVLRKGNDEVLEFLNKYLDDPVLN 565
Query: 307 EQLKGVYSGGEGWGMNEMMKS 327
+Q+K GGEG G ++K+
Sbjct: 566 KQVKVTIVGGEGAGKTTLVKA 586
>SB_1381| Best HMM Match : TP2 (HMM E-Value=5.2)
Length = 428
Score = 31.9 bits (69), Expect = 5.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 1398 DSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDE---MDDEYDMPPSPIPARRQVPVQ 1454
++T+ H + KS A TG +S +S V+ +E DE+ MP P R + Q
Sbjct: 43 EATQSHKNSKETTKSTASTGEQMSSSLESAAVAENEKPNKKDEFAMPAPPSTKRPKAKTQ 102
Query: 1455 QDTTVGS 1461
T VG+
Sbjct: 103 V-TVVGA 108
>SB_57502| Best HMM Match : Toxin_8 (HMM E-Value=8.8)
Length = 159
Score = 31.5 bits (68), Expect = 7.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 1394 EESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEYD 1439
++ D D D + DDD D G G+ D + D+ DD+ D
Sbjct: 100 DDDDDDDDDDDDDDDDDDDVDDDGGGKIDDDDDGGDNDDDGDDDND 145
>SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2653
Score = 31.5 bits (68), Expect = 7.0
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 1176 SEGNKPYSASSQEFAVSRALGKYRLRKSTSISDEQMADISPPKLDKELHEQSN---DDNM 1232
SEGN ++ A+S K + S + E+ A + P + E+++ DN
Sbjct: 1507 SEGNAKLKPDNRRSAISEGNAKPKPDNRRSATSEENAKLKPDNQRSPISEENDKLKPDNQ 1566
Query: 1233 TSKEKKIRKPTTPEIVNSSVSEEN 1256
S + P+ S++SEEN
Sbjct: 1567 RSAISEENAKLKPDNQRSAISEEN 1590
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 31.5 bits (68), Expect = 7.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 243 TLSTIDQITVDKLHELDRLTSQLQNESREIRDLKTRLLTPEPKITKIDREIE 294
T T++ +K HEL LT +L+ ++RE+ L T+L + + +E+E
Sbjct: 586 TCDTLNSSFEEKDHELVDLTERLREKTREVESLTTQLEEAKSALQSKKQELE 637
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 31.5 bits (68), Expect = 7.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 1231 NMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSPSMQSSRGIQNKFQPRHQ 1281
N S+E K + TT EI+ +S+ RS S+ + R I N +P+ +
Sbjct: 670 NKDSEEGKTQAQTTDEIIAQLISDHKKKKNARSHSLGAQRNIPNAKEPKKE 720
>SB_27829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 31.5 bits (68), Expect = 7.0
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 1394 EESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEYD 1439
++ D D D + DDD D G G+ D D+ DD+ D
Sbjct: 155 DDDDDDDDDDDDDDDDDDDDDDDGDGDDDDDDDDNDDDDDDDDDID 200
Score = 31.1 bits (67), Expect = 9.3
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 1386 DITTFPSIEESVDSTKDHDQES-DDDKSYADTGSGETSGPDSPVVSGDEMDDEYD 1439
D+ +++ VD D D + DDD D G G+ D D+ DD+ D
Sbjct: 120 DVDDDVDVDDDVDDDDDDDDDDDDDDDDDDDDGDGDDDDDDDDDDDDDDDDDDDD 174
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 31.5 bits (68), Expect = 7.0
Identities = 49/233 (21%), Positives = 85/233 (36%), Gaps = 20/233 (8%)
Query: 1205 SISDEQMADISPPKLDKELHEQSNDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYTERSP 1264
S +E+ ++ L + E+SND S+E+ + + E S EE S
Sbjct: 657 SEEEEETEKVNKDALKAKATEKSNDSLCLSEEESEEEESEEE---SEEDEEEGAKPSASA 713
Query: 1265 SMQSSRGIQNKFQPRHQQSLEIPNKHDDDDSRXXXXXXXXXXXXXXXXXTEDSIDSEDEW 1324
+ + +NK P+ ++ ++ DDDD + ED+
Sbjct: 714 KIAKTSETENKV-PK----VDKDDEEDDDDEEEESEEDESNKPSSRQVTAK----KEDKK 764
Query: 1325 YCYELRKLEEMEHQSQLEADRHDTLXXXXXXXXXXXXXXXVLKEKMSFTKYDESPMKETW 1384
+ ++ EE E + Q E D + K++ K E KE
Sbjct: 765 GKKKKKEEEEEEEEDQEEEDEDSSGKKKGKKDSSESEKGKAKKQR----KGREKKGKEIK 820
Query: 1385 KDITTFPSIEESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDE 1437
K+ +E D +D D+E D K+ +G G+ G D+ + DDE
Sbjct: 821 KNDDEEEERDEEEDDEEDDDEEDDSKKA---SGKGK-KGQDNKKKGKSKKDDE 869
>SB_20635| Best HMM Match : rve (HMM E-Value=0.91)
Length = 748
Score = 31.5 bits (68), Expect = 7.0
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 1244 TPEIVNSSVSE--ENTIYTERSPSMQSSRGIQNKFQP---RHQQSLEIPNKHDDDDSR 1296
T EI +S+ +E E+ ++ +P + S+ Q+ Q RHQQSL + DD+D +
Sbjct: 540 TSEITSSTRNEQLESETLSKHNPKIDKSQQFQDSLQAHYTRHQQSLTVDPMGDDNDQQ 597
>SB_59713| Best HMM Match : eIF-4B (HMM E-Value=4.5)
Length = 794
Score = 31.5 bits (68), Expect = 7.0
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 1406 ESDDDKSYADT-GSGETSGPDSPV-VSGDEMDDEYDMP-PSPIPARRQVPVQQDTTVGSK 1462
+SDD DT G+G++ D PV SG E D+ + P +P + Q T G K
Sbjct: 267 QSDDTDGPVDTSGTGQSDDSDGPVDTSGTEQSDDTECPVDTPDTGQESDTELQADTTGIK 326
Query: 1463 WKLLKALKD 1471
+ ++L++
Sbjct: 327 QSMNRSLQN 335
>SB_55549| Best HMM Match : zf-C2H2 (HMM E-Value=0.79)
Length = 578
Score = 31.5 bits (68), Expect = 7.0
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 871 VMHENQGYEILSMNEHQKVRKDQYVESG---GMLVSESGYLSISSNVKGKIQERQLKKPK 927
+M +N + +L+ E++ V +++Y G G+L ++S + ++ + G
Sbjct: 199 IMFDNHRHCLLTDGEYELVLQEKYKRPGRKRGLLSNKSSWENVFNGNMGPFDIFAYGPTL 258
Query: 928 RTXXXXXXXXXXXQWLPDLHLPKKHRSHSLPSGVDNVEQPVQEKSLKERIMSAQ 981
+ Q L L H SH+LPS ++ P + S KE+ AQ
Sbjct: 259 KFKLSWSGTPVVSQRPTSLPL---HSSHNLPSATESPHTPSGDSSQKEKTNKAQ 309
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 31.5 bits (68), Expect = 7.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 1394 EESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEY 1438
++ + D D SDDD + D +G+ + D + GD+ DD Y
Sbjct: 312 DDDIYGDDDDDINSDDDAADDDNINGDYNADDEDINGGDDDDDIY 356
Score = 31.1 bits (67), Expect = 9.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 1402 DHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEY 1438
D D SDDD + D +G+ + D + GD+ DD Y
Sbjct: 174 DEDINSDDDAADDDNINGDYNADDEDINGGDDDDDIY 210
>SB_45192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 31.5 bits (68), Expect = 7.0
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 1812 SKARYNVIPLGYNGLIAKDKSGTSDPYVTVQV----SKVKKR-TRTMPQELNPVWNEKFY 1866
S R V+ + L A + GT DPYV V + +VKK+ T T +L+PV+NE
Sbjct: 513 SAERLTVVLIKARNLPAVNIKGT-DPYVKVSLLINGKRVKKKKTSTKKSDLHPVFNEAVS 571
Query: 1867 FE 1868
F+
Sbjct: 572 FD 573
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 31.5 bits (68), Expect = 7.0
Identities = 17/74 (22%), Positives = 30/74 (40%)
Query: 1385 KDITTFPSIEESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEYDMPPSP 1444
+++TT P + + D QE++D + + P S D + +E D P P
Sbjct: 126 QEVTTTPDRPQEANDAPDRPQETNDAPERSHEVTNTPDKPQEVTDSPDRLQEEDDAPDRP 185
Query: 1445 IPARRQVPVQQDTT 1458
A + Q+ T
Sbjct: 186 QEATDESDRSQEAT 199
>SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 31.5 bits (68), Expect = 7.0
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 1126 QELEKLDIDTDISNVDLFEEDTIDPNQSPASIFATIGDVKKASITSDDEKSEGNKPYSAS 1185
Q+ E +I T SN EE N + +I ++ + + ++ ++ P
Sbjct: 73 QQKEDEEIATSFSNGVSLEEQGGTENGAENNIESSNANDGEQDGGDNNSTTDEKPPVEMI 132
Query: 1186 SQEFAVSRALGKYRLRKSTSISDE--QMADISPPKLDKELHEQSNDDNM-TSKEKKIRKP 1242
+ R GK+ L ++ I E +M ISP K DK+ + S++ N S ++K K
Sbjct: 133 GDRVLIERD-GKFELVDASEIKAEYFEMLGISPEKKDKDSDDSSSNSNTNVSSDEKSPKA 191
Query: 1243 TTPEIVNSSVSE 1254
+S+ E
Sbjct: 192 DRKRPKTTSLDE 203
>SB_23551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 31.5 bits (68), Expect = 7.0
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 1832 SGTSDPYVTVQVSKVKKRTRTMPQELNPVW-NEKFYFECHN---SSDRIKVRVWDED 1884
S +D +V V++ V +T + LNP W +E F FE + + +++R+ D D
Sbjct: 22 SDLADAFVEVRLGNVMNKTEVCKKTLNPQWDSEWFRFEVDDEELQDEPLQIRIMDYD 78
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 31.1 bits (67), Expect = 9.3
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 1408 DDDKSYADTGSGETSGPDSPVVSGDEMDDEYDMPPSPIP 1446
DDD D G+ D GD+ DD++D PP P P
Sbjct: 26 DDDDDDDDDDDGDDDDDDD----GDDYDDDHDPPPPPPP 60
>SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 31.1 bits (67), Expect = 9.3
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 1184 ASSQEFAVSRALGKYRLRKSTSISDEQMADISPPKLDKELHEQSNDDNMTSKEKKIRKPT 1243
A S + + A K +LR+S S +D S ++DK +Q+ + SK+KK RK
Sbjct: 137 ARSSDSSEEVAKWKTKLRRSLSKTDALDGKYSSSQIDKLETKQA----IKSKKKKRRKSE 192
Query: 1244 TPEIVNSSV----SEENTIYTERSPSMQSSRGIQNKFQPRHQQ 1282
E++ V S++N T+ S + + Q+ + R QQ
Sbjct: 193 EKELLGEKVDQFNSKKNLNRTKERHSKKMEKNRQDNSKTRSQQ 235
>SB_20155| Best HMM Match : Fe_dep_repress (HMM E-Value=2.6)
Length = 310
Score = 31.1 bits (67), Expect = 9.3
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 1222 ELHEQSNDDNMTSKEKKIRKPTTPEIVNSSVSEENTIYT--ERSPSMQSSRGIQNKFQPR 1279
+ S+ D +S+E + P S + +E + ER+ S G ++ QPR
Sbjct: 144 DFRSMSSQDGQSSREISQAFASPPYGSESKLEKEGLLKFDHERAAKQSSGEGKSSRPQPR 203
Query: 1280 HQQSLEIPNKHDDDDS 1295
+ E P K DDD++
Sbjct: 204 SIPNGEEPGKEDDDNT 219
>SB_9098| Best HMM Match : Rho_RNA_bind (HMM E-Value=8.9)
Length = 208
Score = 31.1 bits (67), Expect = 9.3
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 1394 EESVDSTKDHDQESDDDKSYADTGSGETSGPDSPVVSGDEMDDEYDM 1440
++ D D D + DDD D + D V GD DD+ DM
Sbjct: 147 DDGDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDVDGDGDDDDDDM 193
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 31.1 bits (67), Expect = 9.3
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 233 ISERDLVHLSTLSTIDQITVDKLH-ELDRLTSQLQNESREIRDLKTRLLTPE 283
IS+ D S+L D + E+DRL Q +N RE+RDLK +P+
Sbjct: 437 ISKDDFSRSSSLDFRSSRDKDVIECEMDRLAEQQRNIERELRDLKQEKNSPQ 488
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.1 bits (67), Expect = 9.3
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 1176 SEGNKPYSASSQEFAVS-RALGKYRLRKSTSISDEQMADISPPKLDKELHEQSNDDNMTS 1234
SEG YS+S EF S R L K R + S+S + A+ K K+ + +S D TS
Sbjct: 903 SEGETSYSSSDGEFETSDRELLKKREKDSSSDDELDRANKHQQKKRKKSNHKSPDSEETS 962
Query: 1235 KEKKIRKPTTPEIVNSSVSE 1254
+++R+ + S SE
Sbjct: 963 -HRQLRQKRVKLDLRSPSSE 981
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.128 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,554,839
Number of Sequences: 59808
Number of extensions: 2512933
Number of successful extensions: 9243
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 8927
Number of HSP's gapped (non-prelim): 350
length of query: 1958
length of database: 16,821,457
effective HSP length: 93
effective length of query: 1865
effective length of database: 11,259,313
effective search space: 20998618745
effective search space used: 20998618745
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 67 (31.1 bits)
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