Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001564-TA|BGIBMGA001564-PA|undefined
(612 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g51900.1 68414.m05850 hypothetical protein 36 0.079
At3g20200.1 68416.m02560 protein kinase family protein contains ... 35 0.18
At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase I... 34 0.32
At4g19320.1 68417.m02847 hypothetical protein simlar to At5g2817... 33 0.73
At5g36020.1 68418.m04339 hypothetical protein similar to At5g281... 32 0.97
At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product... 32 0.97
At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein ... 32 1.3
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 32 1.3
At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar... 31 1.7
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 31 2.2
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 31 2.2
At5g16500.1 68418.m01928 protein kinase family protein contains ... 31 2.2
At5g02170.1 68418.m00138 amino acid transporter family protein b... 31 2.2
At1g22160.1 68414.m02770 senescence-associated protein-related s... 31 2.2
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 31 2.2
At2g40650.1 68415.m05016 pre-mRNA splicing factor PRP38 family p... 31 3.0
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 31 3.0
At1g47920.1 68414.m05337 syntaxin-related family protein contain... 31 3.0
At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family... 30 3.9
At1g70950.1 68414.m08185 expressed protein 30 3.9
At5g40450.1 68418.m04905 expressed protein 30 5.2
At5g07170.1 68418.m00817 hypothetical protein 30 5.2
At5g02880.1 68418.m00231 HECT-domain-containing protein / ubiqui... 30 5.2
At3g05220.2 68416.m00570 heavy-metal-associated domain-containin... 30 5.2
At3g05220.1 68416.m00569 heavy-metal-associated domain-containin... 30 5.2
At3g01260.1 68416.m00032 aldose 1-epimerase family protein simil... 30 5.2
At2g37370.1 68415.m04583 hypothetical protein 30 5.2
At5g63740.1 68418.m08000 zinc finger protein-related 29 6.8
At5g61020.2 68418.m07656 YT521-B-like family protein contains Pf... 29 6.8
At5g61020.1 68418.m07655 YT521-B-like family protein contains Pf... 29 6.8
At5g53440.1 68418.m06641 expressed protein 29 6.8
At5g05210.1 68418.m00555 nucleolar matrix protein-related contai... 29 6.8
At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein ... 29 6.8
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 29 9.0
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 29 9.0
At5g50150.1 68418.m06211 expressed protein strong similarity to ... 29 9.0
At5g28646.1 68418.m03507 wave-dampened2 (WVD2) nearly identical ... 29 9.0
At4g39230.1 68417.m05553 isoflavone reductase, putative similar ... 29 9.0
At3g50550.1 68416.m05528 expressed protein isoform contains a n... 29 9.0
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 29 9.0
At1g35110.1 68414.m04352 Ulp1 protease family protein similar to... 29 9.0
At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related ... 29 9.0
>At1g51900.1 68414.m05850 hypothetical protein
Length = 774
Score = 35.9 bits (79), Expect = 0.079
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 7/163 (4%)
Query: 372 TLPDAPDDLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDT-IHEEDVD- 429
T DD S ++++ ED +HK E + D I +R +D M D I E V
Sbjct: 534 TYSSLTDDEEERSKEDTSMEDVNHKHEVYKFSLTD-IKEERSNEDTSMEDCCIEEAQVGK 592
Query: 430 DRHMSEIPSSPRSPLHKVASPTRAISQMRKPSVDSYHSQTPSVIDRRTSQSSFQHEDKLS 489
D+ + S +SP +++ R +Y+ + + RR S+ H
Sbjct: 593 DQRVFRFRESSEEKRKSSSSPLSPLTEFRDMESLTYYMRQKGMHRRRRRSSTSPHCCHNV 652
Query: 490 VPGK----QEEQPTEKSKVTFQDERTTYHEVAEDTSSFRGRQE 528
V + +EE+ E+ ++T + + HE + + F+ ++E
Sbjct: 653 VYNEFKVTKEEEEEERQRLTTKRVHSKLHEYEQFLTQFKKKKE 695
>At3g20200.1 68416.m02560 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 780
Score = 34.7 bits (76), Expect = 0.18
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 412 RYRDDEYMHDTIHEEDVDDRHMSEIPSSPRSPLHKVASPTRAISQMRKPSVDSYHSQTPS 471
R+ D HD D S SP++ L +V + R + Q K ++D Y S
Sbjct: 304 RFNDTNIQHDFSFVSQ--DSGRSSCSCSPQN-LEEVEAEMRRLKQELKHAIDMYGSACRE 360
Query: 472 VIDRRTSQSSFQHEDKLSVPG-KQEEQPTEKSKVTFQDERTTYHEVAEDTSSFRGR 526
+ + Q + K+ G QE Q +EKS + E+ H+ A+D S G+
Sbjct: 361 ALAAKQEAKELQRQ-KIEEEGWVQEGQLSEKSTKSIV-EKERAHKAAKDASETAGK 414
>At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase IV
GI:9651815 from [Arabidopsis thaliana]; identical to cDNA
DNA ligase IV, GI:9651814
Length = 1219
Score = 33.9 bits (74), Expect = 0.32
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 400 DQSIDRD-KISLDRYR-DDEYMHDTIHEE-DVDDRHMSEIPSSPRSPLHKVASPTRAISQ 456
++S+ R+ K+ D Y +YM ++ EE D + +E+ S + + AS AI+
Sbjct: 893 EESLQREEKLCEDVYTLRPKYMEESDTEESDKSEHDTTEVASQGSAQTKEPASSKIAITS 952
Query: 457 MRKPSVDSYHSQTPSVIDRRTSQSSFQHEDKL--SVPGKQEEQPTEKSKVTFQDERTTYH 514
R S T +V R+S +S Q + P K TE+S + + T
Sbjct: 953 SRG------RSNTRAVKRGRSSTNSLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLS 1006
Query: 515 EVAEDTSSFRGRQES 529
++AE+T SF Q +
Sbjct: 1007 DIAEETDSFGEAQRN 1021
>At4g19320.1 68417.m02847 hypothetical protein simlar to At5g28170,
At1g35110, At1g44880, At3g42530, At5g36020, At4g03970,
At3g43010, At2g10350
Length = 721
Score = 32.7 bits (71), Expect = 0.73
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 380 LLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPSS 439
+L++ FD SA ++ +Q ++ +L+ + +T EE++DD HM+E+
Sbjct: 580 VLYNQFDSSANLSQKEQSHLEQDNIMEE-TLETVEASHSVLETQPEENIDDDHMTEVTLE 638
Query: 440 PRSPLHKVASP 450
+ H V P
Sbjct: 639 SAATSHSVELP 649
>At5g36020.1 68418.m04339 hypothetical protein similar to At5g28170,
At1g35110, At1g44880, At3g42530, At4g19320, At4g03970,
At3g43010, At2g10350
Length = 721
Score = 32.3 bits (70), Expect = 0.97
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 380 LLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPSS 439
+L++ FD SA ++ +Q ++ +L+ + +T EE++DD HM+E+
Sbjct: 580 VLYNQFDSSANLSQKEQSPLEQDNIMEE-TLETVEASHSVLETQPEENIDDDHMTEVTLE 638
Query: 440 PRSPLHKVASP 450
+ H V P
Sbjct: 639 SAATSHSVELP 649
>At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product
[Arabidopsis thaliana] GI:871782
Length = 748
Score = 32.3 bits (70), Expect = 0.97
Identities = 36/141 (25%), Positives = 52/141 (36%), Gaps = 10/141 (7%)
Query: 360 ESIQRPPVRRTRTLPDAPDDLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRD-DEY 418
E+ R P RR+ T P +H ESA +T + D RY D
Sbjct: 185 ETRPRTPERRSNTSDTRPRTPIH----ESAATGRRPQTPETRPRTPDH----RYATYDNR 236
Query: 419 MHDTIHEEDVDDRHMSEIPSSPRSPLHKVASP-TRAISQMRKPSVDSYHSQTPSVIDRRT 477
IHE +R + PR+P H+ A P TR + + + + QTP R
Sbjct: 237 PRTPIHESAATERRPQTPETRPRTPEHRSAIPDTRPRTPIHESAATGRRPQTPETRPRTA 296
Query: 478 SQSSFQHEDKLSVPGKQEEQP 498
+ E PG + + P
Sbjct: 297 QRRGRSPEFMERSPGPRSKTP 317
>At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 407
Score = 31.9 bits (69), Expect = 1.3
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 386 DESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEE-DVDDRHMSEIPSSP 440
DE E+ K E D ID D + L + +DE DT H + D+D + +P
Sbjct: 311 DEENREERRQKVEDDLDIDEDVMKLQQRLNDEEGSDTAHHKIDIDQMRIGSNERAP 366
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 23 PDASY--GY-DSYNYQPQYQDTATDLYTDNNYTSYDEDEMQPFFNETPHATPP 72
PD + GY D YNY Y + + +Y ++ Y P NE P+ T P
Sbjct: 68 PDCIFRNGYVDYYNYSFNYATSLSRIYNSHDSFYYPHQTTNPNINENPNLTSP 120
>At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar to
SP|P23394 Pre-mRNA splicing factor RNA helicase PRP28
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00270: DEAD/DEAH box helicase, PF00271: Helicase
conserved C-terminal domain
Length = 733
Score = 31.5 bits (68), Expect = 1.7
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 357 RRQESIQRPPVRRTRTLPDAPDDLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDD 416
RRQ+ I VRR + P+ S+ D + +D D + D+ DRD+ DR RD
Sbjct: 40 RRQDQISEQRVRREQLGRPEPETEDVSNGDTNRDKDRDRDRDRDRERDRDR-ERDRGRDR 98
Query: 417 EYMHDTIHEED 427
+ D + D
Sbjct: 99 DRDRDRDRDRD 109
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 31.1 bits (67), Expect = 2.2
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 386 DESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPSSPRSPLH 445
DE DD+ ++E D D +K +D DD D EED +D E P P P++
Sbjct: 72 DEEDESDDEDESEEDD--DSEK-GMDVDEDDS---DDDEEEDSEDEEEEETPKKP-EPIN 124
Query: 446 KVASPTRAISQMRKPSVDSYHSQTPSVIDRRTSQ 479
K P ++S+ + + P+ ++T +
Sbjct: 125 K-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEE 157
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 31.1 bits (67), Expect = 2.2
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 386 DESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPSSPRSPLH 445
DE DD+ ++E D D +K +D DD D EED +D E P P P++
Sbjct: 155 DEEDESDDEDESEEDD--DSEK-GMDVDEDDS---DDDEEEDSEDEEEEETPKKP-EPIN 207
Query: 446 KVASPTRAISQMRKPSVDSYHSQTPSVIDRRTSQ 479
K P ++S+ + + P+ ++T +
Sbjct: 208 K-KRPNESVSKTPVSGKKAKPAAAPASTPQKTEE 240
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 31.1 bits (67), Expect = 2.2
Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 2/143 (1%)
Query: 379 DLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPS 438
D+ + S S ED++ + E + + S R +E D+ E D + E
Sbjct: 395 DVGNKSSSSSDSEDEEEEKEQKAEKEEESTSKKRQEQEETATDSDDESDSNSEKDQEEEQ 454
Query: 439 SPRSPLHKVASPTRAISQMRKPSVDSYHSQTPSVIDRRTSQSSFQHEDKLSVPGKQEEQP 498
S + +S + + S + S+D ++ S+ ++ SS + ED + K +
Sbjct: 455 SQLEKARE-SSSSSSDSGSERRSIDETNATAQSLKISYSNYSS-EEEDNEKLSSKSSCKS 512
Query: 499 TEKSKVTFQDERTTYHEVAEDTS 521
E+S + D + + + +TS
Sbjct: 513 NEESTFSRYDSGRDHDDSSRNTS 535
>At5g02170.1 68418.m00138 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 526
Score = 31.1 bits (67), Expect = 2.2
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 409 SLDRYRDDEYMHDTIHEEDVDDRHMSEIPSSPRSPLHKVASPTRAISQMRKPSVDSYHSQ 468
+ D+ R+D Y T EED + + S +PS+P S P R+ S+D
Sbjct: 6 TFDQEREDLY--HTFDEEDEESQTESSVPSTPLSRNRSEDVPVPWPRSYRQ-SMDLLTGV 62
Query: 469 TPSVIDRRTSQSSFQHEDKLSVPGKQEEQPTEKSKVTFQDE 509
TP + SSF+ + SV G P+++ + +DE
Sbjct: 63 TPPT--STSFVSSFRQRRQSSVFGSFTSSPSKQQLLIDKDE 101
>At1g22160.1 68414.m02770 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 147
Score = 31.1 bits (67), Expect = 2.2
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 363 QRPPVRRTRTLPDAPDDLLHSSFDESAYED------DDHKTEYDQSIDRDKISLDRYRDD 416
QRPP++RT +L + DL S E + D+H+ + + +D+ +++ R
Sbjct: 7 QRPPIKRTTSLSEIKFDLNQPSEQEPSDHQIQLVNVDEHRQVHQRLLDQRLLAMVSPRGT 66
Query: 417 EYMHDTIHEED 427
+ H + + ED
Sbjct: 67 QRRHSSDYSED 77
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 58 EMQPFFNETPHATPPAAAQKTPWTDSDNATQFSYPVTSEQDL 99
E Q F P PPA AQ+ W D T F T +D+
Sbjct: 205 ENQEFPVSNPVRAPPAIAQEIHWNSGDGGTAFRVSGTETKDI 246
>At2g40650.1 68415.m05016 pre-mRNA splicing factor PRP38 family
protein contains Pfam profile PF03371: PRP38 family
Length = 355
Score = 30.7 bits (66), Expect = 3.0
Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 4/113 (3%)
Query: 386 DESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPSSPRSPLH 445
D + D D+ +YD D D+ D R+ + D E D D + R
Sbjct: 228 DSHRHRDRDYDRDYDMDRDHDR---DYERERGHGRDRDRERD-RDHYRERDRDRERGRDR 283
Query: 446 KVASPTRAISQMRKPSVDSYHSQTPSVIDRRTSQSSFQHEDKLSVPGKQEEQP 498
+ RA + R S D +T V DR + + ++K+ G P
Sbjct: 284 ERDRRDRARRRSRSRSRDRKRHETDDVRDREEPKKKKEKKEKMKEDGTDHPNP 336
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 386 DESAYEDDDHKTEY-DQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEI 436
D+ ED++ + EY D +D D+ D Y DD + +ED DD H + +
Sbjct: 2171 DDMVDEDEEDEDEYNDDMVDEDEDDEDEYNDD------MVDEDEDDFHETRV 2216
>At1g47920.1 68414.m05337 syntaxin-related family protein contains a
novel domain similar to F-box that is shared among other
proteins in Arabidopsis;
Length = 379
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 27 YGYDSYNYQPQYQDTATDLYTDNN------YTSYDEDEMQPFFNE 65
+ Y YNY +Y D + D Y+D++ Y+ D++ +P F +
Sbjct: 157 WDYYDYNYDYEYDDESGDYYSDDDEGRSYCYSYVDDERKEPIFGD 201
>At3g09360.1 68416.m01110 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 600
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 379 DLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPS 438
D+L S FD SA E +++ + I++ K + +E+ + +ED +D + S
Sbjct: 511 DVLESLFDTSAPEKSPKRSKTETDIEKKKEENKEMKSNEHENGENEDEDEEDEEEGNVES 570
>At1g70950.1 68414.m08185 expressed protein
Length = 478
Score = 30.3 bits (65), Expect = 3.9
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 430 DRHMSEIPS-SPRSPLHKVASPTRAISQMRKPSVDSY-HSQTPSVIDRRTSQSSFQHEDK 487
D H S+ PS S +P V + +R + H TP RRT SS K
Sbjct: 213 DEHASKKPSNSMETPSSSVNVKPIIPNDVRVTKASTKGHDVTPKAASRRTKGSSLSSNSK 272
Query: 488 LSVPGKQEEQPTEKSKVTFQDERTTYHE 515
+V K +++ K + Q + + E
Sbjct: 273 TNVDAKSQKELRPKKTIESQPKSSNKTE 300
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 29.9 bits (64), Expect = 5.2
Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 6/132 (4%)
Query: 421 DTIHEEDVDDRHMSEIPSSPRSPLHKVASPTRAISQMRKPSVDSYHSQTPSVIDRRTSQS 480
+ IHEE+ + H E S P+ + SQ+ + + + Q ++
Sbjct: 1858 EEIHEEEPKEAHDVEATSERNLPVETSDADNTLSSQLVSETKEEHKLQAGEILPTEIIPR 1917
Query: 481 SFQHEDKLSVPGKQEEQPTEKSKVTFQDERTTYHEVAEDTSSFRGRQESFXXXXXXXXXX 540
E +S+ +E+ KV Q++ +V E R S
Sbjct: 1918 ESSDEALVSMLASRED-----DKVALQEDNCA-DDVRETNDIQEERSISVETEESVGETK 1971
Query: 541 XAYHEDEFQDEH 552
HEDE +D H
Sbjct: 1972 PKEHEDEIRDAH 1983
>At5g07170.1 68418.m00817 hypothetical protein
Length = 542
Score = 29.9 bits (64), Expect = 5.2
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 373 LPDAPDDLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDD 430
+P + DD L D S+ E+DD ++ + + D D D DD+ D ++D DD
Sbjct: 78 IPSSQDDPLID--DSSSDEEDDSESTHCYAADDDADDTDDDEDDDDDDDDDDDDDDDD 133
>At5g02880.1 68418.m00231 HECT-domain-containing protein /
ubiquitin-transferase family protein /
armadillo/beta-catenin-like repeat-containing protein
similar to SP|Q14669 Thyroid receptor interacting protein
12 (TRIP12) {Homo sapiens}; contains Pfam profiles
PF00632: HECT-domain (ubiquitin-transferase), PF00514:
Armadillo/beta-catenin-like repeat
Length = 1502
Score = 29.9 bits (64), Expect = 5.2
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 417 EYMHDTIHEEDVDDRH--MSEIPSSPRSPLHKVASPTRAISQMRKPSVDSYHSQTPSVI 473
EY+ +HE D + + + + SPR P +AS + ++ +RK DS + PSV+
Sbjct: 1409 EYLLQILHEFDREQQRAFLQFVTGSPRLPHGGLASLSPKLTIVRKHGSDSSDTDLPSVM 1467
>At3g05220.2 68416.m00570 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 478
Score = 29.9 bits (64), Expect = 5.2
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 391 EDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPSSPRSPLHKVASP 450
+D+D + D D D S D Y DDE+ D ++++ H P +K+ P
Sbjct: 79 DDEDDEFSEDDYDDED-FSEDDYDDDEFDDDEDDDDEMGHGHGHGGGGGNHMPPNKMMMP 137
Query: 451 TRAISQM 457
+ + QM
Sbjct: 138 NKMMPQM 144
>At3g05220.1 68416.m00569 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 577
Score = 29.9 bits (64), Expect = 5.2
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 391 EDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPSSPRSPLHKVASP 450
+D+D + D D D S D Y DDE+ D ++++ H P +K+ P
Sbjct: 178 DDEDDEFSEDDYDDED-FSEDDYDDDEFDDDEDDDDEMGHGHGHGGGGGNHMPPNKMMMP 236
Query: 451 TRAISQM 457
+ + QM
Sbjct: 237 NKMMPQM 243
>At3g01260.1 68416.m00032 aldose 1-epimerase family protein similar
to non-cell-autonomous protein pathway2, plasmodesmal
receptor [Nicotiana tabacum] GI:15824567; contains Pfam
profile PF01263: Aldose 1-epimerase
Length = 378
Score = 29.9 bits (64), Expect = 5.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 378 DDLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDD 430
DD ++ ++DDDH + D D + D DD D H++D +D
Sbjct: 40 DDHDQDDDNDGDHDDDDHDDDNDHDDDNNDHDDDDNNDDNNDGDDDHDDDNND 92
>At2g37370.1 68415.m04583 hypothetical protein
Length = 697
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 427 DVDDRHMSEIPSSPRSPLHKVASPTRAISQMRKPSVDSYHSQTPSVIDRRTSQSSFQHED 486
+V D+ E + R PL + SP+R S R PS+ H S + S +
Sbjct: 589 EVLDKTKQEFEAIER-PLLDIESPSRTSSSSRSPSLKMTHETPLSDTVLKLSGGDDSPDS 647
Query: 487 KLSVPGKQEEQPTEK 501
K GK EE P +K
Sbjct: 648 KKGSSGK-EEDPAKK 661
>At5g63740.1 68418.m08000 zinc finger protein-related
Length = 226
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 375 DAPDDLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMS 434
D +D D+ +DDD + D D D D DD+ D ++E+ DD + S
Sbjct: 82 DEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDDENDEECDDEYDS 141
Score = 29.1 bits (62), Expect = 9.0
Identities = 17/50 (34%), Positives = 21/50 (42%)
Query: 386 DESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSE 435
DE EDDD + D D D D DDE + ++D DD E
Sbjct: 84 DEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDDENDE 133
>At5g61020.2 68418.m07656 YT521-B-like family protein contains Pfam
profile PF04146: YT521-B-like family
Length = 493
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 26 SYGYDSYNYQPQYQDTATDLYTDNNYTSYDEDEMQ 60
SYGYDS+ Y P + N Y Y ++ ++
Sbjct: 163 SYGYDSWKYMPNWYAVNNTYKPRNGYHGYGKENIE 197
>At5g61020.1 68418.m07655 YT521-B-like family protein contains Pfam
profile PF04146: YT521-B-like family
Length = 495
Score = 29.5 bits (63), Expect = 6.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 26 SYGYDSYNYQPQYQDTATDLYTDNNYTSYDEDEMQ 60
SYGYDS+ Y P + N Y Y ++ ++
Sbjct: 165 SYGYDSWKYMPNWYAVNNTYKPRNGYHGYGKENIE 199
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 29.5 bits (63), Expect = 6.8
Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 356 LRRQESIQRPPVRRTRTLPDAPDDLLHSSFDE-SAYEDDDHKTEYDQSIDRDKISLDRYR 414
LR E + R ++ D +D H E Y + + +YD+ DR++ +R R
Sbjct: 267 LRSDEKLTRDESKKKSKFQD--NDHGHEPDSELDGYHERERNRDYDRESDRNERDRERTR 324
Query: 415 DDEYMHDTIHEEDVD-DRHMSEIPSSPRSPLHKVASPTRAISQMRKPSVDSYHSQTPSVI 473
D D +E D D DR R R + R D H + +
Sbjct: 325 D----RDRDYERDRDRDRDRDRERDRDRRDYEHDRYHDRDWDRDRSRDRDRDHERDRTHD 380
Query: 474 DRRTSQSSFQHEDKLSVPGKQEEQPTEKSKVTFQDER 510
+ + H+ K S ++ + + S++ Q R
Sbjct: 381 REKDRSRDYYHDGKRSKSDRERDNDRDVSRLDDQSGR 417
>At5g05210.1 68418.m00555 nucleolar matrix protein-related contains
Pfam domain, PF04935: Surfeit locus protein 6
Length = 386
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 357 RRQESIQRPPVRRTRTLPDAPDDLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDD 416
++ ++ + + ++ + PDD D + DDD K E D + +D S+
Sbjct: 111 KKHADLREQKLEQEKSGTELPDDDSKKETDNNRLNDDDSKEETDNNRQKDDRSVTYEELR 170
Query: 417 EYMHDTIHE 425
E +H I E
Sbjct: 171 ERLHRKIDE 179
>At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 287
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 386 DESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSEIPSSPRSPLH 445
+E + +DDD + D+ ++ D DD +++ DD E P P P
Sbjct: 139 EEDSSDDDDSENSGDEEEEKVTAESDSEEDDS------SDDEEDDSSEEETPKKPEEPKK 192
Query: 446 KVASP 450
+ A P
Sbjct: 193 RSAEP 197
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 29.1 bits (62), Expect = 9.0
Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 6/115 (5%)
Query: 418 YMHDTIHEEDVDDRHMSEIPSSPRSPLHKVASPTRAISQMRKP--SVDSYHSQTPSVIDR 475
Y+ D + E+D D R L A R I +K + S T + R
Sbjct: 459 YLEDALDEDDEDYRSNRGYEED----LEAEAQRERRILNAKKSHKGIPGRSSMTSARPSR 514
Query: 476 RTSQSSFQHEDKLSVPGKQEEQPTEKSKVTFQDERTTYHEVAEDTSSFRGRQESF 530
R + S ++ ++EE+ ++ +D Y E AE+ RG+ +
Sbjct: 515 RQMEYSESEREESEYETEEEEEEKSPARGRGKDSEDEYEEDAEEDEEERGKSNRY 569
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 29.1 bits (62), Expect = 9.0
Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 6/115 (5%)
Query: 418 YMHDTIHEEDVDDRHMSEIPSSPRSPLHKVASPTRAISQMRKP--SVDSYHSQTPSVIDR 475
Y+ D + E+D D R L A R I +K + S T + R
Sbjct: 459 YLEDALDEDDEDYRSNRGYEED----LEAEAQRERRILNAKKSHKGIPGRSSMTSARPSR 514
Query: 476 RTSQSSFQHEDKLSVPGKQEEQPTEKSKVTFQDERTTYHEVAEDTSSFRGRQESF 530
R + S ++ ++EE+ ++ +D Y E AE+ RG+ +
Sbjct: 515 RQMEYSESEREESEYETEEEEEEKSPARGRGKDSEDEYEEDAEEDEEERGKSNRY 569
>At5g50150.1 68418.m06211 expressed protein strong similarity to
unknown protein (gb|AAF04872.1) contains Pfam profile
PF03080: Arabidopsis proteins of unknown function
Length = 420
Score = 29.1 bits (62), Expect = 9.0
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 440 PRSPLHKVASPTRAISQMRKPSVDSYHSQTPSVIDRRTS--QSSFQHEDKLSVPGKQEEQ 497
P + K+ +S++ KPS+ + HS VI+ S Q +F H P Q ++
Sbjct: 47 PNREIQKLRRVEAYLSKINKPSIKTIHSPDGDVIECVPSHLQPAFDH------PQLQGQK 100
Query: 498 PTEKSKVTFQDERTTYHEVAEDTSSFRG 525
P + + TTY E S G
Sbjct: 101 PLDSPYRPSKGNETTYEESFNQLWSMSG 128
>At5g28646.1 68418.m03507 wave-dampened2 (WVD2) nearly identical to
WAVE-DAMPENED2 [Arabidopsis thaliana] GI:28453880
Length = 293
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 437 PSSPRSPLHKVASPTRAISQMRKPSVDSYHSQTPSVIDRRTSQSSFQHEDKLSVPGK 493
P SP+ L + S + AI+ + + +S + Q+ + +DR Q S +E + S K
Sbjct: 143 PKSPKLNLSRRKSCSDAITSSGEENSNSQNRQSVAYVDRERLQHSINNEPRFSKEAK 199
>At4g39230.1 68417.m05553 isoflavone reductase, putative similar to
allergenic isoflavone reductase-like protein Bet v
6.0102 [Betula pendula][GI:10764491]; contains Pfam
profile PF02716: Isoflavone reductase
Length = 308
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 28 GYDSYNYQPQYQDTATDLYTDNNYTSYDE 56
G+ S+ +P + A++LY D YT+ DE
Sbjct: 274 GHTSFEIEPSFGVEASELYPDVKYTTVDE 302
>At3g50550.1 68416.m05528 expressed protein isoform contains a
non-consensus AT donor site at intron 1
Length = 95
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 378 DDLLHSSFDESAYEDDDHKTEYDQSIDRDKISLDRYRDDEYMHDTIHEEDVDDRHMSE 435
DD D + ++DD + + + S D + S D Y D D EED DD E
Sbjct: 20 DDDDDDDTDGESSDEDDEEEDRNLSGDDSESSEDDYTDSNSDSDDDDEEDDDDEEEEE 77
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 67 PHATPPAAAQKTPWTDSDNATQFSYPVTSEQDLLLSKTVPSTISYLTQPPITSQQ 121
P PP A PW + T FS ++ LL S + P++ S + PI+ QQ
Sbjct: 86 PLVRPPPQAYSRPWQQHSSYTHFS---SASSPLLSSSSAPASSS--SSLPISGQQ 135
>At1g35110.1 68414.m04352 Ulp1 protease family protein similar to
At5g28170, At1g44880, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1311
Score = 29.1 bits (62), Expect = 9.0
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 377 PDDLLHSSFDESAYEDDD--HKTEYDQS-IDRDKISLDRYRDDEYMH---DTIHEEDVDD 430
P+D H + DE + D + ++ +QS +++D I + E H +T EE++D+
Sbjct: 795 PND--HEADDEGKIQFDSSANLSQKEQSPLEQDNIMEETLETVEASHSLLETQPEENIDN 852
Query: 431 RHMSEIPSSPRSPLHKVASP 450
HM+E+ + H V P
Sbjct: 853 DHMTEVTLESAATSHSVELP 872
>At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related
contains weak similarity to Swiss-Prot:P10366 ATP
phosphoribosyltransferase [Escherichia coli]
Length = 1402
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 55 DEDEMQPFFNETPHATPPAAAQKTPWTDSDNAT-QFSYPVTSEQDLLLSKTVPSTISYLT 113
D D+M+ FN T P++ +PW + T T E+ L S V T+S
Sbjct: 1098 DSDDMKELFNSTDSTVIPSSLGDSPWQAMASFTSSIMSESTDEEVSLFSPRVFETVSNAL 1157
Query: 114 Q 114
Q
Sbjct: 1158 Q 1158
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.309 0.125 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,362,412
Number of Sequences: 28952
Number of extensions: 411246
Number of successful extensions: 1353
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1279
Number of HSP's gapped (non-prelim): 91
length of query: 612
length of database: 12,070,560
effective HSP length: 85
effective length of query: 527
effective length of database: 9,609,640
effective search space: 5064280280
effective search space used: 5064280280
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 62 (29.1 bits)
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