BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001563-TA|BGIBMGA001563-PA|undefined (150 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.70 SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2 SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2 SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 29 2.1 SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8 SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 3.7 SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12) 28 3.7 SB_12315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7 SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 27 4.9 SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 4.9 SB_48692| Best HMM Match : PLAT (HMM E-Value=0.015) 27 4.9 SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9 SB_26860| Best HMM Match : Melittin (HMM E-Value=1.5) 27 4.9 SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96) 27 4.9 SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5 SB_5276| Best HMM Match : DNA_RNApol_7kD (HMM E-Value=1.1) 27 6.5 SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 27 8.6 SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6 SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14) 27 8.6 SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 27 8.6 SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 27 8.6 >SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 663 Score = 30.3 bits (65), Expect = 0.70 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 53 QRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQLHAQASME 102 QR +E SR++ R+E + + DP SQ R + D WS LH E Sbjct: 58 QRFIEVSRKDPRSRNEAYQYEVRDPAAAESQLRYAQTDHWS-LHQVGEKE 106 >SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1149 Score = 29.5 bits (63), Expect = 1.2 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Query: 39 ASQFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQLHAQ 98 + Q R AH T R+ T YE Y + T P +Q R D+W + AQ Sbjct: 1029 SGQERELAHSRATYDRTRST-----YEPVRYSSQLTTIPPRQLNQALYTRADSWEKQRAQ 1083 Query: 99 ASMESAISWRTAA 111 + + S W +A Sbjct: 1084 SKLMSTPHWNQSA 1096 >SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 542 Score = 29.5 bits (63), Expect = 1.2 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 69 YHTHGDTDPLYYNSQPRTNRMDT--WSQLHAQASMESAIS 106 YHT D LY+ +P++N + W H +A + IS Sbjct: 322 YHTQTDEHNLYFRPEPKSNSSGSRVWIMKHVRAELGQEIS 361 >SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) Length = 876 Score = 28.7 bits (61), Expect = 2.1 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Query: 47 HQMHTPQRSLETSRENSYERDEYHTHGDTDP 77 H + P+ + R + YERD Y+ H D DP Sbjct: 240 HDLPPPRDPYDRERRDPYERDPYYDHRD-DP 269 >SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1453 Score = 28.3 bits (60), Expect = 2.8 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 19 EDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRENSYERDEY 69 ED Y +L P+ A ++ TA QMH ++ E+ + SY R+EY Sbjct: 486 EDGHY--ELPLPIKNEALNLSNNRETAVRQMHQLKKRFESPQNESY-REEY 533 >SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) Length = 1439 Score = 27.9 bits (59), Expect = 3.7 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Query: 12 DIPAGYSEDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRENSYERDEYHT 71 D+ S D DY D G H++ S + HT R + SR +YE+ H Sbjct: 1170 DMDRSRSRDYDYRYDRRDYSGYHSDGSYTD-----PYYHTQDRGYDRSRRGAYEQGLGHN 1224 Query: 72 HGDTDPLYYNSQPRTNRMDTWSQLHAQASMESAISWR 108 + ++ + +R D + H + S E +++ Sbjct: 1225 LRHSREDLFHDDLQRSREDLYYPDHRRTSSEDRSAFK 1261 >SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12) Length = 1650 Score = 27.9 bits (59), Expect = 3.7 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 39 ASQFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDT 91 A + R H PQ+ E ++ + D Y D++P +Y S R + DT Sbjct: 1185 AKELRKKHKHEHKPQKDDEEKDDDDKDDDVYFDFDDSNPSFYRSM-RGSDYDT 1236 >SB_12315| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 528 Score = 27.9 bits (59), Expect = 3.7 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 84 PRTN-RMDTWSQLHAQASMESAISWRTAADWQSGEEQRRPSLERQSTLYD 132 PRT ++D WS + AQA E + GE + ++RQ ++ D Sbjct: 248 PRTGEKLDDWSFVDAQAFCEHVTEFLLNHSTLDGESPPKKKVKRQESIVD 297 >SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) Length = 1879 Score = 27.5 bits (58), Expect = 4.9 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 2/93 (2%) Query: 41 QFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQLHAQAS 100 Q +T+ + + +TS+E E H +P Q +T++ T Q S Sbjct: 1615 QQQTSQEEPILSMKQQQTSQEEPILSMEQHQTSQEEPALSMEQQQTSKKPTLGVEQQQTS 1674 Query: 101 MESAISWRTAADWQSGEEQRRPSLERQSTLYDD 133 E I + Q+ +E+ S+E+Q T ++ Sbjct: 1675 QEEPI--LSMKQQQTSQEEPILSMEQQRTSQEE 1705 >SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) Length = 1041 Score = 27.5 bits (58), Expect = 4.9 Identities = 11/28 (39%), Positives = 13/28 (46%) Query: 60 RENSYERDEYHTHGDTDPLYYNSQPRTN 87 REN Y + H H T P Y RT+ Sbjct: 310 RENLYNENNQHGHARTQPQVYREPTRTS 337 >SB_48692| Best HMM Match : PLAT (HMM E-Value=0.015) Length = 324 Score = 27.5 bits (58), Expect = 4.9 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 53 QRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRM---DTWSQLH-AQASMESAISWR 108 +R E +R Y R+EY T P+ Y Q + +++ D W LH +A E W Sbjct: 67 KRDDEDARAKDYLREEYKTFLKDGPVEYTLQIQYHQVSNDDPWYILHPGRAWNEENHPWL 126 Query: 109 TAAD 112 AD Sbjct: 127 DLAD 130 >SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1907 Score = 27.5 bits (58), Expect = 4.9 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 48 QMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQ 94 + H RS + +E + E Y T GD Y ++ R+N W+Q Sbjct: 519 ESHVQLRSPKQEQEKTEEGSRY-TPGDLTGYQYKTKDRSNENKRWTQ 564 >SB_26860| Best HMM Match : Melittin (HMM E-Value=1.5) Length = 595 Score = 27.5 bits (58), Expect = 4.9 Identities = 12/34 (35%), Positives = 17/34 (50%) Query: 78 LYYNSQPRTNRMDTWSQLHAQASMESAISWRTAA 111 L+ S P T + W+ L AQ ES+ +W A Sbjct: 82 LWLISTPSTQEVQMWTTLEAQGIAESSQAWHEIA 115 >SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96) Length = 725 Score = 27.5 bits (58), Expect = 4.9 Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 34 HANCSASQFRTAAHQMHTPQRSLETSRENSYERDE 68 HA A + R H++ T +TS+E ++ER+E Sbjct: 562 HAYPPAHESRMCEHELTTIAEVCDTSKEKTWEREE 596 >SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 6489 Score = 27.1 bits (57), Expect = 6.5 Identities = 11/34 (32%), Positives = 15/34 (44%) Query: 19 EDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTP 52 +D+D TS P+ H + S R H H P Sbjct: 5294 DDADDTSSYTIPMRSHRHSSRGHHRKHRHDRHNP 5327 >SB_5276| Best HMM Match : DNA_RNApol_7kD (HMM E-Value=1.1) Length = 886 Score = 27.1 bits (57), Expect = 6.5 Identities = 14/38 (36%), Positives = 17/38 (44%) Query: 111 ADWQSGEEQRRPSLERQSTLYDDGLGYGYESYTTTGAH 148 A W E+RR R+S LYDD G T +H Sbjct: 280 ARWFEEAERRRKIATRESGLYDDASGVYLGDDNKTASH 317 >SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) Length = 195 Score = 26.6 bits (56), Expect = 8.6 Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 125 ERQSTLYDDGLGYGYESYTTTGAH 148 E ST+Y + + GY Y +TG H Sbjct: 88 EYMSTVYTEYMSTGYTEYMSTGVH 111 >SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1880 Score = 26.6 bits (56), Expect = 8.6 Identities = 10/20 (50%), Positives = 14/20 (70%) Query: 124 LERQSTLYDDGLGYGYESYT 143 +E S LYDDGLG+ + + T Sbjct: 1767 VENLSALYDDGLGWSFPNIT 1786 >SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14) Length = 1774 Score = 26.6 bits (56), Expect = 8.6 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 6/101 (5%) Query: 38 SASQFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQL-H 96 S T H P S +NS E T T Y+ Q R T+S Sbjct: 925 SHGSHETTPHINGAPVSKTSNSTQNSTEATTRKTGTPTSKTSYSKQSRAEPSTTYSTCQQ 984 Query: 97 AQASMESAISWRTAADWQSGEEQRRPSLERQ-STLYDDGLG 136 A + SAI+ + +G PS+ Q + L D +G Sbjct: 985 ASTAQASAINGSITSKTSTG----NPSITSQLAALIPDSIG 1021 >SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) Length = 610 Score = 26.6 bits (56), Expect = 8.6 Identities = 13/56 (23%), Positives = 24/56 (42%) Query: 20 DSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDT 75 D T ++N P+ CS S+ ++ P+ L+ + N+ R + H T Sbjct: 334 DLQGTQNINQPIIGEKRCSESKLNQWNNRFTMPKPKLKGNNSNTRNRSKAHRRSRT 389 >SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) Length = 1376 Score = 26.6 bits (56), Expect = 8.6 Identities = 18/74 (24%), Positives = 25/74 (33%) Query: 4 TSIDSFSVDIPAGYSEDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRENS 63 T+ + + +P G S YP A Q T + + LE R S Sbjct: 391 TNTERYPNTLPGGSGAVQPVASTERYPNTLPGGSGAVQPMTNTERYLNGENILEIERSQS 450 Query: 64 YERDEYHTHGDTDP 77 Y DE + DP Sbjct: 451 YPEDEPDDMSEPDP 464 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.310 0.124 0.371 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,753,172 Number of Sequences: 59808 Number of extensions: 213225 Number of successful extensions: 418 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 402 Number of HSP's gapped (non-prelim): 25 length of query: 150 length of database: 16,821,457 effective HSP length: 76 effective length of query: 74 effective length of database: 12,276,049 effective search space: 908427626 effective search space used: 908427626 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.8 bits) S2: 56 (26.6 bits)
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