Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001563-TA|BGIBMGA001563-PA|undefined
(150 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444... 33 0.13
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 32 0.22
09_06_0348 + 22452219-22452360,22452791-22452912,22453342-224534... 30 0.68
07_03_0868 - 22157711-22157937,22158112-22158758,22158918-22159570 30 0.90
09_06_0230 + 21717225-21717301,21717888-21717972,21718045-217181... 29 1.6
05_01_0277 + 2152679-2153038 29 2.1
04_04_0859 + 28805836-28805842,28806405-28806492,28807474-288075... 29 2.1
03_02_0195 - 6325907-6326173,6326996-6327149,6327245-6327336,632... 29 2.1
01_01_0928 + 7339796-7339806,7339923-7340043,7340463-7340549,734... 28 2.8
12_02_0736 + 22650641-22650689,22650827-22650975,22651783-226518... 27 4.8
10_08_0070 + 14637290-14637766,14639215-14639261,14640043-146401... 27 4.8
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 27 4.8
09_02_0292 + 6991202-6991937,6998629-6999185,6999489-7000196 27 8.4
06_03_1325 - 29334401-29334859,29335163-29335857,29336538-293367... 27 8.4
06_02_0031 + 10769375-10769785 27 8.4
>02_01_0598 +
4440018-4440070,4440627-4440693,4440794-4440926,
4441075-4441120,4442470-4442521,4442601-4442753,
4443338-4443457,4443549-4443714,4443822-4443934,
4444049-4444120,4444992-4445213,4445270-4445317,
4445639-4445697,4445809-4445887,4445982-4446119,
4446327-4446551,4446643-4447430,4447548-4447723,
4447911-4448169,4448646-4448707,4451055-4451212,
4451618-4451743,4452197-4452260,4452386-4452494,
4452607-4452760,4453055-4453178,4453257-4453333,
4453442-4453494,4453673-4453727,4453833-4454021
Length = 1379
Score = 32.7 bits (71), Expect = 0.13
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 33 QHANCSASQFRTAAHQMHTPQRSLETSRENSYERDEYHTHGD 74
+H + S + R+ + P+RSLE RE++ RD +HG+
Sbjct: 913 RHDDSSRKRHRSLSRSRSPPRRSLERDREHNRNRDTDRSHGN 954
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 60 RENSYERDEYHTHGDTDPLYYNSQPRTNRMDTW-SQLHAQASMESAISWRTAADWQSGEE 118
R+N+ R E H H D P +S PR ++ + + + ++ + RT ++G++
Sbjct: 313 RDNTPSRGEMHHHRDNTPSRVDSSPRRSQHEDFRDRSPSRRDKSPSERGRTTESHEAGKK 372
Query: 119 QRRPSLERQS 128
R LE S
Sbjct: 373 SRGAKLENNS 382
>09_06_0348 +
22452219-22452360,22452791-22452912,22453342-22453436,
22453691-22453844,22453952-22454014,22454329-22454478,
22454650-22454982,22455086-22455820
Length = 597
Score = 30.3 bits (65), Expect = 0.68
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 5 SIDSFSVDIPAGYSEDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRENSY 64
S+ S D + SD+ ++ Y G A + T + S+ET NSY
Sbjct: 153 SVHELSDDSNGYTTPPSDFADEIMYDDGVIQMDGADELATETETKD--EESIETGELNSY 210
Query: 65 ERDEYHTHGDT 75
E + H+ G+T
Sbjct: 211 EEEGEHSSGET 221
>07_03_0868 - 22157711-22157937,22158112-22158758,22158918-22159570
Length = 508
Score = 29.9 bits (64), Expect = 0.90
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 56 LETSRENSY--ERDEYHTHGDTDPLYYNSQPRTNRMDTWSQLHAQAS 100
++T EN Y E DE+ H DTD YY+++ D + H++ +
Sbjct: 330 VDTYPENDYQAEEDEFGRHFDTDSNYYDAEEYGWASDEDGECHSECN 376
>09_06_0230 +
21717225-21717301,21717888-21717972,21718045-21718165,
21718244-21718368,21718940-21718984,21719082-21719345,
21720067-21720111,21720182-21720212,21721644-21721693,
21722433-21724310,21724406-21724564,21724821-21724939,
21726917-21727059,21727670-21727735,21728184-21728317,
21728454-21728591,21728927-21729186,21729295-21729406,
21730727-21730909
Length = 1344
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 6 IDSFSVDIPAGYSEDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETS 59
I FS D G + D D + PVG A CS S+ A + P +LE S
Sbjct: 850 IVQFSYDTADGMNNDHDLEGEPGAPVGSWAACSISE--AAYGALDHPVNALEDS 901
>05_01_0277 + 2152679-2153038
Length = 119
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 70 HTHGDTDPLYYNSQPRTNRMDTWSQLHAQASMESAISWRTAADWQSGEEQRRPSLERQST 129
+T G D ++ + + R + S A S+ S T A G+ + + R S
Sbjct: 25 NTSGSIDEHHHRHRAKKPRRHSSSSSAAGTPSSSSSSSTTTATRTGGDVEEEVVMRRSSQ 84
Query: 130 LYDDGLGYGYE 140
LY D + YE
Sbjct: 85 LYGDVMACAYE 95
>04_04_0859 +
28805836-28805842,28806405-28806492,28807474-28807558,
28807638-28807763,28807819-28807968,28808497-28808541,
28808612-28808875,28809843-28809887,28810395-28810430,
28812048-28812816,28813063-28813925,28814024-28814182,
28814440-28814558,28815356-28815417,28816677-28816805,
28817395-28817460,28817757-28817890,28818025-28818162,
28818630-28818889,28818996-28819107,28819590-28819675,
28820655-28820735,28822841-28822928,28823222-28823260,
28823847-28823964,28824063-28824130,28824884-28824981,
28825238-28825397,28825691-28825816,28825876-28825945,
28826046-28826449
Length = 1664
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 9 FSVDIPAGYSEDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETS 59
FS D G D D + PVG A CS S+ A + P SLE S
Sbjct: 772 FSYDTADGMYSDHDLEGEPGAPVGSWAACSISE--AAYGALDHPVNSLEDS 820
>03_02_0195 -
6325907-6326173,6326996-6327149,6327245-6327336,
6327433-6327534,6328406-6328528,6328635-6328683,
6328759-6328854,6328937-6329276,6329428-6329643,
6329759-6329864,6330144-6330192,6330519-6330792,
6330870-6330960,6331663-6331994,6332084-6332261,
6332815-6332872,6332956-6333089
Length = 886
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 102 ESAISWRTAADWQSGEEQRRPSLERQSTLYDDGLGYGY 139
+S + W AA+ +G+ +R P + D+ +G+GY
Sbjct: 79 DSDLLWHLAAEVGNGQARRHPFINEFIKSVDETIGFGY 116
>01_01_0928 +
7339796-7339806,7339923-7340043,7340463-7340549,
7341230-7341637,7341726-7341789,7342654-7342793,
7342878-7343189,7343733-7344137
Length = 515
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 112 DWQSGE-EQRRPSLERQSTLYDDGLGYGYE 140
D+ +GE E+ L+ +YDDG GY YE
Sbjct: 97 DFDNGENEEEDYYLDEDDCIYDDGDGYDYE 126
>12_02_0736 +
22650641-22650689,22650827-22650975,22651783-22651839,
22653534-22653611,22654688-22654953,22655249-22655351
Length = 233
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 89 MDTWSQLHAQASMESAISWRTAADWQSGEEQ 119
MD+W +L A A ++ A+ A+ GEE+
Sbjct: 3 MDSWERLAADARLQDALIGMEEAEGSEGEEE 33
>10_08_0070 +
14637290-14637766,14639215-14639261,14640043-14640106,
14641022-14641440,14641821-14642055
Length = 413
Score = 27.5 bits (58), Expect = 4.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 103 SAISWRTAADWQSGEEQRRP 122
S + W A W+SG+E+R P
Sbjct: 12 SGVGWGRATPWRSGDERRPP 31
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 17 YSEDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQR 54
Y + S L+ PV H S SQF HQ P+R
Sbjct: 435 YETGTQTASSLSSPVHIHKLASHSQFHAPPHQPPPPER 472
>09_02_0292 + 6991202-6991937,6998629-6999185,6999489-7000196
Length = 666
Score = 26.6 bits (56), Expect = 8.4
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 14 PAGYSEDSDYTSDLNYPVGQHANCSASQFRTAAHQM--HTPQRSLETSRENSYERDEYHT 71
P + ++ LNYPV S+S TA + P SL R ER E T
Sbjct: 414 PVDLARFKNHLKGLNYPVNPQCMMSSSLTHTAGNHPSGDNPTDSLNEKRVEKEERGELST 473
>06_03_1325 -
29334401-29334859,29335163-29335857,29336538-29336750,
29338791-29339472,29339781-29340020
Length = 762
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 26 DLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRE 61
D+ YP G NCS S + TPQ L T R+
Sbjct: 43 DIEYPFGIGPNCSLSDDFSLECVHDTPQLRLGTDRQ 78
>06_02_0031 + 10769375-10769785
Length = 136
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 97 AQASMESAISWRTAADWQSGEEQRRP 122
A A++ A++WR AA W+ G + P
Sbjct: 69 ALATLAVALAWRAAAPWRDGVVAQTP 94
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.310 0.124 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,842,718
Number of Sequences: 37544
Number of extensions: 187042
Number of successful extensions: 410
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 399
Number of HSP's gapped (non-prelim): 15
length of query: 150
length of database: 14,793,348
effective HSP length: 76
effective length of query: 74
effective length of database: 11,940,004
effective search space: 883560296
effective search space used: 883560296
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)
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