Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001563-TA|BGIBMGA001563-PA|undefined
(150 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.70
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 29 2.1
SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 3.7
SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12) 28 3.7
SB_12315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 27 4.9
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 4.9
SB_48692| Best HMM Match : PLAT (HMM E-Value=0.015) 27 4.9
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_26860| Best HMM Match : Melittin (HMM E-Value=1.5) 27 4.9
SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96) 27 4.9
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_5276| Best HMM Match : DNA_RNApol_7kD (HMM E-Value=1.1) 27 6.5
SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 27 8.6
SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14) 27 8.6
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 27 8.6
SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 27 8.6
>SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 30.3 bits (65), Expect = 0.70
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 53 QRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQLHAQASME 102
QR +E SR++ R+E + + DP SQ R + D WS LH E
Sbjct: 58 QRFIEVSRKDPRSRNEAYQYEVRDPAAAESQLRYAQTDHWS-LHQVGEKE 106
>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 39 ASQFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQLHAQ 98
+ Q R AH T R+ T YE Y + T P +Q R D+W + AQ
Sbjct: 1029 SGQERELAHSRATYDRTRST-----YEPVRYSSQLTTIPPRQLNQALYTRADSWEKQRAQ 1083
Query: 99 ASMESAISWRTAA 111
+ + S W +A
Sbjct: 1084 SKLMSTPHWNQSA 1096
>SB_57887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 69 YHTHGDTDPLYYNSQPRTNRMDT--WSQLHAQASMESAIS 106
YHT D LY+ +P++N + W H +A + IS
Sbjct: 322 YHTQTDEHNLYFRPEPKSNSSGSRVWIMKHVRAELGQEIS 361
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 47 HQMHTPQRSLETSRENSYERDEYHTHGDTDP 77
H + P+ + R + YERD Y+ H D DP
Sbjct: 240 HDLPPPRDPYDRERRDPYERDPYYDHRD-DP 269
>SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1453
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 19 EDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRENSYERDEY 69
ED Y +L P+ A ++ TA QMH ++ E+ + SY R+EY
Sbjct: 486 EDGHY--ELPLPIKNEALNLSNNRETAVRQMHQLKKRFESPQNESY-REEY 533
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 12 DIPAGYSEDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRENSYERDEYHT 71
D+ S D DY D G H++ S + HT R + SR +YE+ H
Sbjct: 1170 DMDRSRSRDYDYRYDRRDYSGYHSDGSYTD-----PYYHTQDRGYDRSRRGAYEQGLGHN 1224
Query: 72 HGDTDPLYYNSQPRTNRMDTWSQLHAQASMESAISWR 108
+ ++ + +R D + H + S E +++
Sbjct: 1225 LRHSREDLFHDDLQRSREDLYYPDHRRTSSEDRSAFK 1261
>SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12)
Length = 1650
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 39 ASQFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDT 91
A + R H PQ+ E ++ + D Y D++P +Y S R + DT
Sbjct: 1185 AKELRKKHKHEHKPQKDDEEKDDDDKDDDVYFDFDDSNPSFYRSM-RGSDYDT 1236
>SB_12315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 84 PRTN-RMDTWSQLHAQASMESAISWRTAADWQSGEEQRRPSLERQSTLYD 132
PRT ++D WS + AQA E + GE + ++RQ ++ D
Sbjct: 248 PRTGEKLDDWSFVDAQAFCEHVTEFLLNHSTLDGESPPKKKVKRQESIVD 297
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 27.5 bits (58), Expect = 4.9
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 41 QFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQLHAQAS 100
Q +T+ + + +TS+E E H +P Q +T++ T Q S
Sbjct: 1615 QQQTSQEEPILSMKQQQTSQEEPILSMEQHQTSQEEPALSMEQQQTSKKPTLGVEQQQTS 1674
Query: 101 MESAISWRTAADWQSGEEQRRPSLERQSTLYDD 133
E I + Q+ +E+ S+E+Q T ++
Sbjct: 1675 QEEPI--LSMKQQQTSQEEPILSMEQQRTSQEE 1705
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 60 RENSYERDEYHTHGDTDPLYYNSQPRTN 87
REN Y + H H T P Y RT+
Sbjct: 310 RENLYNENNQHGHARTQPQVYREPTRTS 337
>SB_48692| Best HMM Match : PLAT (HMM E-Value=0.015)
Length = 324
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 53 QRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRM---DTWSQLH-AQASMESAISWR 108
+R E +R Y R+EY T P+ Y Q + +++ D W LH +A E W
Sbjct: 67 KRDDEDARAKDYLREEYKTFLKDGPVEYTLQIQYHQVSNDDPWYILHPGRAWNEENHPWL 126
Query: 109 TAAD 112
AD
Sbjct: 127 DLAD 130
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 48 QMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQ 94
+ H RS + +E + E Y T GD Y ++ R+N W+Q
Sbjct: 519 ESHVQLRSPKQEQEKTEEGSRY-TPGDLTGYQYKTKDRSNENKRWTQ 564
>SB_26860| Best HMM Match : Melittin (HMM E-Value=1.5)
Length = 595
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 78 LYYNSQPRTNRMDTWSQLHAQASMESAISWRTAA 111
L+ S P T + W+ L AQ ES+ +W A
Sbjct: 82 LWLISTPSTQEVQMWTTLEAQGIAESSQAWHEIA 115
>SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96)
Length = 725
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 34 HANCSASQFRTAAHQMHTPQRSLETSRENSYERDE 68
HA A + R H++ T +TS+E ++ER+E
Sbjct: 562 HAYPPAHESRMCEHELTTIAEVCDTSKEKTWEREE 596
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 19 EDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTP 52
+D+D TS P+ H + S R H H P
Sbjct: 5294 DDADDTSSYTIPMRSHRHSSRGHHRKHRHDRHNP 5327
>SB_5276| Best HMM Match : DNA_RNApol_7kD (HMM E-Value=1.1)
Length = 886
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 111 ADWQSGEEQRRPSLERQSTLYDDGLGYGYESYTTTGAH 148
A W E+RR R+S LYDD G T +H
Sbjct: 280 ARWFEEAERRRKIATRESGLYDDASGVYLGDDNKTASH 317
>SB_41475| Best HMM Match : HSA (HMM E-Value=7.5)
Length = 195
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 125 ERQSTLYDDGLGYGYESYTTTGAH 148
E ST+Y + + GY Y +TG H
Sbjct: 88 EYMSTVYTEYMSTGYTEYMSTGVH 111
>SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 124 LERQSTLYDDGLGYGYESYT 143
+E S LYDDGLG+ + + T
Sbjct: 1767 VENLSALYDDGLGWSFPNIT 1786
>SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14)
Length = 1774
Score = 26.6 bits (56), Expect = 8.6
Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 6/101 (5%)
Query: 38 SASQFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDTDPLYYNSQPRTNRMDTWSQL-H 96
S T H P S +NS E T T Y+ Q R T+S
Sbjct: 925 SHGSHETTPHINGAPVSKTSNSTQNSTEATTRKTGTPTSKTSYSKQSRAEPSTTYSTCQQ 984
Query: 97 AQASMESAISWRTAADWQSGEEQRRPSLERQ-STLYDDGLG 136
A + SAI+ + +G PS+ Q + L D +G
Sbjct: 985 ASTAQASAINGSITSKTSTG----NPSITSQLAALIPDSIG 1021
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 20 DSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRENSYERDEYHTHGDT 75
D T ++N P+ CS S+ ++ P+ L+ + N+ R + H T
Sbjct: 334 DLQGTQNINQPIIGEKRCSESKLNQWNNRFTMPKPKLKGNNSNTRNRSKAHRRSRT 389
>SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)
Length = 1376
Score = 26.6 bits (56), Expect = 8.6
Identities = 18/74 (24%), Positives = 25/74 (33%)
Query: 4 TSIDSFSVDIPAGYSEDSDYTSDLNYPVGQHANCSASQFRTAAHQMHTPQRSLETSRENS 63
T+ + + +P G S YP A Q T + + LE R S
Sbjct: 391 TNTERYPNTLPGGSGAVQPVASTERYPNTLPGGSGAVQPMTNTERYLNGENILEIERSQS 450
Query: 64 YERDEYHTHGDTDP 77
Y DE + DP
Sbjct: 451 YPEDEPDDMSEPDP 464
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.124 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,753,172
Number of Sequences: 59808
Number of extensions: 213225
Number of successful extensions: 418
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 402
Number of HSP's gapped (non-prelim): 25
length of query: 150
length of database: 16,821,457
effective HSP length: 76
effective length of query: 74
effective length of database: 12,276,049
effective search space: 908427626
effective search space used: 908427626
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)
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