Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001562-TA|BGIBMGA001562-PA|IPR008973|C2
calcium/lipid-binding region, CaLB
         (86 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB028955-1|BAA82984.2| 1702|Homo sapiens KIAA1032 protein protein.     89   3e-18
BC111781-1|AAI11782.1| 1610|Homo sapiens UNC13B protein protein.       87   6e-18
AL354669-2|CAH71208.1| 1591|Homo sapiens unc-13 homolog B (C. el...    87   6e-18
AL354669-1|CAH71207.1| 1622|Homo sapiens unc-13 homolog B (C. el...    87   6e-18
AL353795-12|CAH71004.1| 1591|Homo sapiens unc-13 homolog B (C. e...    87   6e-18
AL353795-11|CAH71003.1| 1622|Homo sapiens unc-13 homolog B (C. e...    87   6e-18
AL160274-2|CAH73361.1| 1591|Homo sapiens unc-13 homolog B (C. el...    87   6e-18
AL160274-1|CAH73362.1| 1622|Homo sapiens unc-13 homolog B (C. el...    87   6e-18
AF020202-1|AAC19406.1| 1591|Homo sapiens Munc13 protein.               87   6e-18
AB209998-1|BAE06080.1| 1620|Homo sapiens UNC13B variant protein ...    87   6e-18
U50839-1|AAC35207.1| 1123|Homo sapiens g16 protein protein.            27   7.0  
BC046643-1|AAH46643.1|  601|Homo sapiens RBM6 protein protein.         27   7.0  
AF091264-1|AAD04160.1| 1123|Homo sapiens RNA binding motif prote...    27   7.0  
AF069517-1|AAC21578.1| 1123|Homo sapiens RNA binding protein DEF...    27   7.0  
AF042857-1|AAC05826.1| 1123|Homo sapiens lung cancer antigen NY-...    27   9.3  

>AB028955-1|BAA82984.2| 1702|Homo sapiens KIAA1032 protein protein.
          Length = 1702

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EIN ++LGL VEVWNKG+IWD  +G  ++PL ++     E  G W+ L++Q++M    + 
Sbjct: 51  EINRLDLGLTVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQVIMADSEIC 110

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE P D
Sbjct: 111 GTKDPTFHRILLDTRFELPLD 131


>BC111781-1|AAI11782.1| 1610|Homo sapiens UNC13B protein protein.
          Length = 1610

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EI+ ++LGL VEVWNKG+IWD  +G  ++ L ++   + E  G W  LEA+ +M+   + 
Sbjct: 52  EISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEIC 111

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE PFD
Sbjct: 112 GTRNPTPHKILLDTRFELPFD 132


>AL354669-2|CAH71208.1| 1591|Homo sapiens unc-13 homolog B (C.
           elegans) protein.
          Length = 1591

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EI+ ++LGL VEVWNKG+IWD  +G  ++ L ++   + E  G W  LEA+ +M+   + 
Sbjct: 52  EISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEIC 111

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE PFD
Sbjct: 112 GTRNPTPHKILLDTRFELPFD 132


>AL354669-1|CAH71207.1| 1622|Homo sapiens unc-13 homolog B (C.
           elegans) protein.
          Length = 1622

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EI+ ++LGL VEVWNKG+IWD  +G  ++ L ++   + E  G W  LEA+ +M+   + 
Sbjct: 52  EISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEIC 111

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE PFD
Sbjct: 112 GTRNPTPHKILLDTRFELPFD 132


>AL353795-12|CAH71004.1| 1591|Homo sapiens unc-13 homolog B (C.
           elegans) protein.
          Length = 1591

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EI+ ++LGL VEVWNKG+IWD  +G  ++ L ++   + E  G W  LEA+ +M+   + 
Sbjct: 52  EISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEIC 111

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE PFD
Sbjct: 112 GTRNPTPHKILLDTRFELPFD 132


>AL353795-11|CAH71003.1| 1622|Homo sapiens unc-13 homolog B (C.
           elegans) protein.
          Length = 1622

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EI+ ++LGL VEVWNKG+IWD  +G  ++ L ++   + E  G W  LEA+ +M+   + 
Sbjct: 52  EISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEIC 111

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE PFD
Sbjct: 112 GTRNPTPHKILLDTRFELPFD 132


>AL160274-2|CAH73361.1| 1591|Homo sapiens unc-13 homolog B (C.
           elegans) protein.
          Length = 1591

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EI+ ++LGL VEVWNKG+IWD  +G  ++ L ++   + E  G W  LEA+ +M+   + 
Sbjct: 52  EISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEIC 111

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE PFD
Sbjct: 112 GTRNPTPHKILLDTRFELPFD 132


>AL160274-1|CAH73362.1| 1622|Homo sapiens unc-13 homolog B (C.
           elegans) protein.
          Length = 1622

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EI+ ++LGL VEVWNKG+IWD  +G  ++ L ++   + E  G W  LEA+ +M+   + 
Sbjct: 52  EISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEIC 111

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE PFD
Sbjct: 112 GTRNPTPHKILLDTRFELPFD 132


>AF020202-1|AAC19406.1| 1591|Homo sapiens Munc13 protein.
          Length = 1591

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EI+ ++LGL VEVWNKG+IWD  +G  ++ L ++   + E  G W  LEA+ +M+   + 
Sbjct: 52  EISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEIC 111

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE PFD
Sbjct: 112 GTRNPTPHKILLDTRFELPFD 132


>AB209998-1|BAE06080.1| 1620|Homo sapiens UNC13B variant protein
           protein.
          Length = 1620

 Score = 87.4 bits (207), Expect = 6e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)

Query: 5   EINDINLGLLVEVWNKGVIWDRALGYHYLPLASVAYDEHECGGRWVELEAQLMMRGGAVV 64
           EI+ ++LGL VEVWNKG+IWD  +G  ++ L ++   + E  G W  LEA+ +M+   + 
Sbjct: 81  EISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEGPGEWSTLEAETLMKDDEIC 140

Query: 65  GTNGPTGHTLLLDCRFEPPFD 85
           GT  PT H +LLD RFE PFD
Sbjct: 141 GTRNPTPHKILLDTRFELPFD 161


>U50839-1|AAC35207.1| 1123|Homo sapiens g16 protein protein.
          Length = 1123

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 23  IWDRALGYHYLPLASVAYD 41
           I+D A GY+Y PLA   YD
Sbjct: 791 IYDSATGYYYDPLAGTYYD 809


>BC046643-1|AAH46643.1|  601|Homo sapiens RBM6 protein protein.
          Length = 601

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 23  IWDRALGYHYLPLASVAYD 41
           I+D A GY+Y PLA   YD
Sbjct: 269 IYDSATGYYYDPLAGTYYD 287


>AF091264-1|AAD04160.1| 1123|Homo sapiens RNA binding motif protein
           6 protein.
          Length = 1123

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 23  IWDRALGYHYLPLASVAYD 41
           I+D A GY+Y PLA   YD
Sbjct: 791 IYDSATGYYYDPLAGTYYD 809


>AF069517-1|AAC21578.1| 1123|Homo sapiens RNA binding protein DEF-3
           protein.
          Length = 1123

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 23  IWDRALGYHYLPLASVAYD 41
           I+D A GY+Y PLA   YD
Sbjct: 791 IYDSATGYYYDPLAGTYYD 809


>AF042857-1|AAC05826.1| 1123|Homo sapiens lung cancer antigen
           NY-LU-12 variant A protein.
          Length = 1123

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 23  IWDRALGYHYLPLASVAYD 41
           I+D A GY+Y PLA   YD
Sbjct: 791 IYDSASGYYYDPLAGTYYD 809


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.144    0.476 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,424,512
Number of Sequences: 224733
Number of extensions: 540774
Number of successful extensions: 842
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 827
Number of HSP's gapped (non-prelim): 15
length of query: 86
length of database: 73,234,838
effective HSP length: 64
effective length of query: 22
effective length of database: 58,851,926
effective search space: 1294742372
effective search space used: 1294742372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)