Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001559-TA|BGIBMGA001559-PA|IPR004148|BAR, IPR001452|Src
homology-3, IPR013315|Spectrin alpha chain
(843 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 69 4e-12
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 64 1e-10
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 59 2e-09
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 57 9e-09
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 54 8e-08
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 50 2e-06
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 48 5e-06
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 46 3e-05
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 45 5e-05
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 44 1e-04
SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr 1|||... 42 5e-04
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 40 0.002
SPCC24B10.13 |skb5||Shk1 kinase binding protein 5|Schizosaccharo... 39 0.003
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 38 0.004
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 37 0.013
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.018
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 36 0.031
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 34 0.094
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 31 0.50
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.50
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 31 0.88
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 31 0.88
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 1.5
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 29 2.7
SPAC25H1.03 |mug66|mug66|meiotically upregulated gene Mug66|Schi... 28 4.7
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 28 4.7
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 28 6.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 6.2
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 27 8.2
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 68.5 bits (160), Expect = 4e-12
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 467 VKGISKLSGQAKSNTYPQPEGVLGDCMLHYGKKLGEDTIFSQCLIEMGEALKQMADVKYS 526
V+ + K G P +G + G+ L + S I G+++ ++ ++
Sbjct: 54 VRNMDKRKGLLDEKDKQLPVTHVGSSFVELGQALSHSSSNSHTYIMYGKSMVEIGHLQEE 113
Query: 527 LDDNIKQSFLEPLHHLQTKDLKEVMHHRKKLQGRRLDFDC---KRRRQAKGSHIPDDEIR 583
D + SFL L + + K + KK++ RRL FD K ++ K ++++R
Sbjct: 114 FMDYLNNSFLANLEN-SLAEFKALDVKEKKMENRRLVFDALSTKIQKAKKEESKLEEDLR 172
Query: 584 QAEEKFAESLQLAQVGMFNLLDNDEEQVAQLAFFAEGLLEYHQQCTEILKGLVSQLMEKK 643
A K+ ESL+ + M L + + ++V + + + +HQ+ ++LKGL KK
Sbjct: 173 NARAKYEESLEEFEDRMVQLKELEPDRVENVVRLLQMQIRFHQKSLDLLKGLEMNGFSKK 232
Query: 644 EEAINRPKMEF----VPKTLADLNI 664
+ +N PK + +P ++ N+
Sbjct: 233 RDNVNIPKRTYSARSIPSNISSTNV 257
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 760 SVASPLPSPVKSPARTPMAPNKAPCCTAL-YDFDPENPGELGFKENDVITLINKVDDNWF 818
+++ PS + +P+A + + Y F+PE EL K+ D++ ++ ++D+ W+
Sbjct: 400 NISDAPPSKLNRSYSSPLASISSRKVVRMKYSFEPETENELKLKKGDLLLVLKEIDEGWW 459
Query: 819 -------EGSLNGKTGYFPISY 833
+G G TG FP +Y
Sbjct: 460 VGEKLGEDGVFTGNTGMFPSNY 481
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 736 PAPAFKPHPAPRAQPNG-KDPWTAVSVASPLPSPVKSPARTPMAPNKAPCCTALYDFDPE 794
P P P PA A P A + A P+P P +PA P A + ALYD+ +
Sbjct: 366 PPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAAAPAAEH----VVALYDYAAQ 421
Query: 795 NPGELGFKENDVITLINKVD--DNWFEGSLNGKTGYFPISYVQV 836
G+L F D I ++++ D + W+ G LNG G FP +YVQ+
Sbjct: 422 AAGDLSFHAGDRIEVVSRTDNQNEWWIGRLNGAQGQFPGNYVQL 465
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 744 PAPRAQPNGKDPWTAVSVASPLPSPVKSPARTPMAPNKAPCCTALYDFDPENPGELGFKE 803
PAP+ Q + S LP P P N A+YDF + G+LGF
Sbjct: 108 PAPQKQSEAS---SVNSSTEKLPPPPSYPGPNTAHKN-VERVLAMYDFPGPDAGDLGFHA 163
Query: 804 NDVITLINKVDDNWFEGSLNGKTGYFPISYVQV 836
+VI ++ V+++W+ G LNGK G FP +YV++
Sbjct: 164 GEVIIVLEHVNNDWWRGELNGKEGIFPSNYVRL 196
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 57.2 bits (132), Expect = 9e-09
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 752 GKDPWTAVSVASPLPSPVKSPARTPMAPNKAPCCTALYDFDPENPGELGFKENDVITLIN 811
G P V + P + PA P A A+YD+ + EL F E+++I ++
Sbjct: 773 GLFPSNYVEITGPNETANNPPAE-PQAGGPGKSVKAIYDYQAQEDNELSFFEDEIIANVD 831
Query: 812 KVDDNWFEGSLNGKTGYFPISYVQ 835
VD NW+EG +G G FP +YV+
Sbjct: 832 CVDPNWWEGECHGHRGLFPSNYVE 855
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 779 PNKAPCCTALYDFDPENPGELGFKENDVITLINKVDDNWFEG-SLNGKTGYFPISYVQVN 837
P K P +YD+ PE E+ EN+ I ++ VDD W+ G + G+ G FP +YV++
Sbjct: 725 PTKTPAIV-IYDYSPEEENEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSNYVEIT 783
Query: 838 VP 839
P
Sbjct: 784 GP 785
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 54.0 bits (124), Expect = 8e-08
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 787 ALYDFDPENPGELGFKENDVITLINKVDDNWFEGSLNGKTGYFPISYVQ 835
ALYDF GEL FK+ D+I ++ V +W++GS G FP++YVQ
Sbjct: 222 ALYDFAATEQGELSFKKGDIILVLESVYKDWWKGSCKNAVGIFPVNYVQ 270
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 735 RPAPAFKPHPAPRAQPNGKDPWTAVSVASPLPSPVKSPARTPMAP-NKAPCCTALYDFDP 793
+PAP+ A + N P V+ PS V P P A K ALYDF
Sbjct: 1061 KPAPSTVTSAAS-SPSNISKPSAPVANNVSKPSAVPPPPPPPPAEVEKKDLYLALYDFAG 1119
Query: 794 ENPGELGFKENDVITLINKVDDNWFEGSLNGKTGYFPISYV 834
+P E+ K++++I ++ K W+ NG G+ P +YV
Sbjct: 1120 RSPNEMTIKKDEIIEIVQKEPSGWWLALKNGAEGWVPATYV 1160
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 777 MAPNKAPCCTALYDFDPENPGELGFKENDVITLINK--VDDNWFEGSLNGKTGYFPISYV 834
+ PN+A A+Y F E PG+L F++ D+I ++ + D+W+ G + + G FP +YV
Sbjct: 371 LGPNQA---RAMYSFAGEQPGDLSFQKGDIIDIVERSGSHDDWWTGRIGYREGIFPANYV 427
Query: 835 QVN 837
+++
Sbjct: 428 KLS 430
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 787 ALYDFDPENPGELGFKENDVITLINKVDDN-WFEGSLNGKTGYFPISYV 834
ALY + ++ EL +E D+I + N+ N W EG LNG TG FP +YV
Sbjct: 591 ALYAYTAQSDMELSIQEGDIIQVTNRNAGNGWSEGILNGVTGQFPANYV 639
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 754 DPWTAVSVASPLPSPVKSPARTPMAPNKAPCCTALYDFDPENPGELGFKENDVITLINKV 813
D + S+ S VK+ TP P LYDF E+ G + E TL+
Sbjct: 489 DDMDSSSIYQTSLSNVKTEETTPAEPASKVDGVVLYDFTGEHEGVITASEGQEFTLLEPD 548
Query: 814 D-DNWFEGSLNGKTGYFPISYVQVN 837
D W ++G G P SYV++N
Sbjct: 549 DGSGWVRVKIDGTDGLIPASYVKLN 573
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 787 ALYDFDPENPGELGFKENDVITLINKVDDNWFEGSL----NGKTGYFPISYVQ 835
ALYD+ + P E+ F++ D + ++ +D W++G + N K G FP ++VQ
Sbjct: 873 ALYDYQAQIPEEISFQKGDTLMVLRTQEDGWWDGEIINVPNSKRGLFPSNFVQ 925
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 786 TALYDFDPENPGELGFKENDVITLINKVDDNWFEGSLNGK----TGYFPISYVQ 835
+ALYD+D P E+ F++ D I ++ +D W+EG + G+ G FP ++V+
Sbjct: 613 SALYDYDAAIPEEISFRKGDTIAVLKLYEDGWWEGFVVGEDDHNRGQFPSNFVR 666
>SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 785 CTALYDFDPENPG-ELGFKENDVITLINKVDDN-----WFEG-SLNGKTGYFPISYVQV 836
C A Y+F +PG E+ K+ D+I +++K D W++G +G+TG+FP +Y +
Sbjct: 227 CKADYEFMSRDPGVEMSLKKGDIIAILSKTDTQGNPCEWWQGRKRSGETGWFPSNYCSI 285
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 786 TALYDFD-PENPGELGFKENDVITLINKVDDNWFEGSLNGKTGYFPISYV 834
TA+ D++ NP L F D I +I ++D W +G + K G+FP S +
Sbjct: 6 TAISDYENSSNPSFLKFSAGDTIIVIEVLEDGWCDGICSEKRGWFPTSCI 55
>SPCC24B10.13 |skb5||Shk1 kinase binding protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 140
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 787 ALYDFDPENPGELGFKENDVITLINKVDDNWF--EGSLNGKTGYFPISYVQVNV 838
ALYDF+P + ELGF + ++++ D W +G++G P ++V++ V
Sbjct: 87 ALYDFEPLHDNELGFTTGQRLCILSESSDGWLIAYDDASGRSGLVPETFVKLEV 140
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 779 PNKAPCCT-ALYDFDPENPGELGFKENDVITLINKVDDNWFEG-SLNGKT-GYFPISYVQ 835
P + PC ALY + E G+L F E D+I ++ D W+ G +N T G FP ++V
Sbjct: 4 PKQLPCMVRALYAWPGEREGDLKFTEGDLIECLSIGDGKWWIGRHINTNTQGIFPSNFVH 63
Query: 836 -VNVP 839
+++P
Sbjct: 64 CLDIP 68
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 786 TALYDFDPENPGELGFKENDVITLIN-KVDDNWFEGSLNGKTGYFPISYVQ 835
T LYDF E EL K N + ++N +W++ S++GK G P ++++
Sbjct: 514 TVLYDFIAEAADELTVKANMRVVIVNDTASSDWWKCSVDGKEGVVPSNFIK 564
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 787 ALYDFDPENPGELGFKENDVITLINKVDDNWFEGSLNGKTGYFPISYVQ 835
ALYD+ ++ E+ F+ + + D +W N G P +YV+
Sbjct: 87 ALYDYTQQSVDEISFQADQTLDCYGDTDSDWILVGFNNNFGLAPRNYVE 135
Score = 29.9 bits (64), Expect = 1.5
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 793 PENPGELGFKENDVITLINKVDDNWF 818
PEN E+ E++++ L+ K +D+W+
Sbjct: 28 PENEREISIVEDEIVCLLEKGEDDWY 53
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 711 HTGPRTGPHAGPHTGPHSGPHTGLRPAPAFKPHPA-PRAQPNGKDPWTAVSVASPLPSPV 769
H G + A P P + LRP + P P+ P P P S A P+PS +
Sbjct: 114 HIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP--IPSKAPPIPSSL 171
Query: 770 KSPARTPMAPNKAP 783
PA+ P AP K+P
Sbjct: 172 PPPAQ-PAAPVKSP 184
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 787 ALYDFDPENPGELGFKENDVITLINKVDDNWFEGSL----NGKTGYFPISYVQ 835
ALY + P E+ +D + ++N+ D W++G + G+ G FP +Y++
Sbjct: 359 ALYAYKATLPSEIDLNVDDTLVVLNRQKDGWWKGLVVSPTVGRIGLFPSNYIE 411
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 33.9 bits (74), Expect = 0.094
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 766 PSPVKSPARTPMAPNKAPCCTALYDFDPENPGELGFKENDVITLINKVDDNWFEG-SLN- 823
P+P +P R + + A+Y F N EL DVI + ++ +W+ G +N
Sbjct: 267 PTPFSTPKRK--SKKETVFVKAIYSFTGRNEKELDLHTGDVIQVSEQLGPDWYMGEKVNS 324
Query: 824 -----GKTGYFPISY 833
G +G FP++Y
Sbjct: 325 KAEKLGNSGMFPVNY 339
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 31.5 bits (68), Expect = 0.50
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 570 RQAKGSHIPDDEIRQAEEKFAESLQLAQVGMFNL-LDNDEEQVAQLAFF--AEGLLEYHQ 626
R + + I D+ + + K + + +G FN +D+D E+V +L + L Y Q
Sbjct: 722 RNMEYTSISDNLVFPSGMKIYDHTNILWMGDFNYRIDSDNEEVRKLVELDDLDKLASYDQ 781
Query: 627 QCTEILKGLV 636
CTE+ KG V
Sbjct: 782 LCTEMKKGTV 791
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.50
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 701 PDPFRAWEAPHTGPRTGPHAGPHTG--PHSGPHTGLRPAPAFKPHPAPRAQPN-GKDPWT 757
P P A P P P +G P P G+ P P P P +P+ G P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP-PVPKPSVGVPPVP 1211
Query: 758 AVSVASPLPSPVKSPARTPMAPNKAP 783
S A P+P+P P+ KAP
Sbjct: 1212 PPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 30.7 bits (66), Expect = 0.88
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 708 EAPHTGPRTGPHAGPHTGPHSGPHTGLRPAPAFKPHPAPRAQPNGKDPWTAV-SVASPLP 766
E P P + P + P + + P + P P P P+ P V S A P+P
Sbjct: 985 EPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP 1044
Query: 767 SPVKSPARTPMAPNKAP 783
P +P P + + AP
Sbjct: 1045 IPTSTPP-VPKSSSGAP 1060
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 787 ALYDFDPENPGELGFKENDVITLINKVDDNWFEGSL-----NGKTGYFPISYVQ 835
ALY + +L F VI +++ +D +W+ G+ N K G FP + +
Sbjct: 10 ALYPYRSSFSDDLEFDPGQVIDVVSNLDGDWYTGTYVDSDGNRKIGSFPKDFTE 63
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 30.7 bits (66), Expect = 0.88
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 12/86 (13%)
Query: 699 STPDPFRAWEAPHTGPRTGPHAGPHTGPHSGPHTGLRPAPAFKPHPAPRAQPNGKDPWTA 758
S P WE P G P P + HS P +G P P++ AP P +
Sbjct: 30 SDPKAKPQWECPVRGLTIPP---PPSVDHSAPPSG--PPPSYSNSAAPAT------PAAS 78
Query: 759 VSVASPLPSPVKSPART-PMAPNKAP 783
S A+P P+P S R AP P
Sbjct: 79 ASSAAPAPAPAASQNRAYGAAPQPYP 104
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 789 YDFDPENPGELGFKENDVITLINKVDDNWFE----GSLNGKTGYFPISYVQV 836
+DF E P EL K + I +I + + W G L G G P+S++Q+
Sbjct: 132 FDFAAERPDELEAKAGEAIIIIARSNHEWLVAKPIGRLGG-PGLIPLSFIQL 182
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 710 PHTGPRTGPHAGPHTGPHSGPHTGLRPAPAFKPHP--APRAQP--NGKDPWTAVSVASPL 765
P P + P + P + P S P + APA P P AP A P G + A+P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 766 PSPVKSPARTPMAP 779
P P +PA P AP
Sbjct: 476 PPPAPAPA--PAAP 487
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 714 PRTGPHAGPHTGPHSGPHTGLRPAPAFKPHPAPRAQPNGKDPWTAV-SVASPLPSPVKSP 772
P G A P P S P TG +P P + RA N P A+ ++P P+ +
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPL----SSSRAVSNPPAPPPAIPGRSAPALPPLGNA 409
Query: 773 ARTPMAPNKAP 783
+RT P P
Sbjct: 410 SRTSTPPVPTP 420
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 744 PAPRAQPNGKDPWTAVSVASPLPSPVKSPARTPMA--PNKAPCCTALYDFDP 793
P P + P+ + P S+++P P P+ P+ ++ PN P A +P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 512 EMGEALK--QMADVKYSLDDNIKQSFLEPLHH--LQTKDLKEVMHHRKKL 557
E+ EA+K Q+ D+ + D +KQ+FLE L H +D K ++ +KL
Sbjct: 661 ELREAIKDVQVGDMSDFISDLLKQNFLESLVHGNYTEEDAKNLIESAQKL 710
>SPAC25H1.03 |mug66|mug66|meiotically upregulated gene
Mug66|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 433 SVKTDVTCELVEELQTKTKEFL-----QPNPTARAKMAAVKGISKLSGQAKSNTYPQPEG 487
+V T V EL E+L TK EF+ + + + + K S K NT P +
Sbjct: 47 TVPTLVGAELNEQLATKAAEFIDTIRNEAGANGQMILLLYERSPKKSWFGKGNTIPWEQW 106
Query: 488 VLGDCMLHYGKKLGEDTIFSQCLIE 512
+L +L G E ++ + +E
Sbjct: 107 ILHTTILEEGDSYQESSLSLEAAVE 131
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 28.3 bits (60), Expect = 4.7
Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 697 DLSTPDPFRAWEAPHTGPRTGPHAGPHTGPHSGPHTGLRPAPAFKPHPAPRAQPNGKDPW 756
D+S P + P+ A P P + P + L P F P +AQP +
Sbjct: 414 DVSVNAPAETQDKSTVVPQESATATPKRSPSATPTSALPPIGKFAPPTTAKAQPAPEKRR 473
Query: 757 TAVSVASPLPSPVKSPARTPMAPNKAPCCTALYDFDPENPGELGFKENDVITLINKVDDN 816
+V + S ++ T P + +NP EL F E+ L N+ N
Sbjct: 474 GEPAVQTRNHSK-RTRTATSSVEETTPRAFNVPIAQNKNPSELEFLEHARQYLANESKYN 532
Query: 817 WF 818
F
Sbjct: 533 EF 534
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 710 PHTGPRTGPH-AGPHTGPHSGPHTG 733
P GP GP G H GP GPH G
Sbjct: 101 PPRGPLFGPRIGGGHHGPLHGPHGG 125
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 710 PHTGPRTGPHAGPHTGPHSGPHTGLRPAPAFKP--HPAPRAQPNGKDPWTAVSVASPLPS 767
P P T AG + P G R AP+ P P P A + S S LP
Sbjct: 850 PLPPPSTSTTAGWNDAPMLGQLPMRRAAPSMAPVRSPFPGASSAQPAAMSRTSSVSTLPP 909
Query: 768 PVKSPARTPMAP 779
P + + T AP
Sbjct: 910 PPPTASMTASAP 921
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 718 PHAGPHTGPHSGPHTGLRPAPAFKPHPAPRAQPNGKDPWTAVSVASPLPSPVKSPARTPM 777
P + P+T P + + + PA +KPH + P K P V P S S P
Sbjct: 979 PPSNPYT-PIAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTASQRASAYEPPT 1037
Query: 778 APNKAP 783
+P
Sbjct: 1038 VSVPSP 1043
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 601 FNLLDNDEEQVAQLAFFAEGLLEYHQQCTEILKGLVSQLMEKKEEAINRPKMEFVPKTLA 660
FN+ ++DEE A+L +LE+ + L+ + S+L++ + ++ +
Sbjct: 992 FNITNSDEEDEAELQLLVTEILEFQALYSASLRRMRSKLIKSLLHLLEIAPTQYQENKNS 1051
Query: 661 DLNI-EGMH 668
L++ EG+H
Sbjct: 1052 LLSLCEGLH 1060
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.135 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,230,604
Number of Sequences: 5004
Number of extensions: 93975
Number of successful extensions: 389
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 323
Number of HSP's gapped (non-prelim): 64
length of query: 843
length of database: 2,362,478
effective HSP length: 79
effective length of query: 764
effective length of database: 1,967,162
effective search space: 1502911768
effective search space used: 1502911768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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