Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001558-TA|BGIBMGA001558-PA|IPR002301|Isoleucyl-tRNA
synthetase, class Ia, IPR002300|Aminoacyl-tRNA synthetase, class Ia,
IPR013155|tRNA synthetase, valyl/leucyl, anticodon-binding,
IPR001412|Aminoacyl-tRNA synthetase, class I, IPR009080|Aminoacyl-tRNA
synthetase, class 1a, anticodon-binding
(1212 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr... 1285 0.0
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 198 2e-50
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 198 2e-50
U53155-2|AAC48266.2| 918|Caenorhabditis elegans Valyl trna synt... 107 5e-23
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 104 3e-22
Z73912-2|CAA98144.4| 859|Caenorhabditis elegans Hypothetical pr... 55 4e-07
Z73912-3|CAE18063.1| 828|Caenorhabditis elegans Hypothetical pr... 52 3e-06
AB096633-1|BAC76733.1| 828|Caenorhabditis elegans leucyl-tRNA s... 52 3e-06
Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical p... 43 0.001
Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical p... 43 0.001
AC024201-7|AAF36018.2| 321|Caenorhabditis elegans Hypothetical ... 33 1.2
Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical pr... 32 2.2
Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical pr... 31 3.8
AF067214-10|AAC17009.1| 206|Caenorhabditis elegans Hypothetical... 31 5.0
Z82052-4|CAB04827.2| 374|Caenorhabditis elegans Hypothetical pr... 31 6.6
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 31 6.6
AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical... 31 6.6
AC087079-16|AAO12401.2| 509|Caenorhabditis elegans Hypothetical... 30 8.7
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 30 8.7
>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical protein
R11A8.6 protein.
Length = 1141
Score = 1285 bits (3183), Expect = 0.0
Identities = 605/1059 (57%), Positives = 788/1059 (74%), Gaps = 14/1059 (1%)
Query: 8 VPESINFPAEEDKILEFWKKIDAFQTCLKQSKSRPKYSFYDGPPFATGLPHYGHILAGTI 67
VP++INF EEDK+ + W+ + FQ ++ SK RP ++FYDGPPFATGLPHYGH+L TI
Sbjct: 7 VPDNINFAREEDKVAQKWQDENTFQRSVELSKDRPHFTFYDGPPFATGLPHYGHMLTSTI 66
Query: 68 KDVVTRYAHQQGYHVERRFGWDCHGLPVEFEIDKTLGIKGPEDVHKLGIDKYNAECRKIV 127
KDVV R+AHQ G++VERRFGWD HGLPVE+EIDKTLGI GP+DV K+GI YN ECRKIV
Sbjct: 67 KDVVGRWAHQNGHYVERRFGWDTHGLPVEYEIDKTLGISGPQDVMKMGIANYNNECRKIV 126
Query: 128 MKYAADWENIITRMGRWIDFKNDYKTLYPWFMESIWWVFKELYNKGLVYQGVKVMPYSTA 187
M+Y+ +WE + R+GRW+DFK+DYKTLYPWFMES+WW F EL+ KGLVY+GVKVMP+STA
Sbjct: 127 MRYSGEWEKTMGRLGRWVDFKHDYKTLYPWFMESVWWAFSELHKKGLVYKGVKVMPFSTA 186
Query: 188 CSTPLSNFESGQNYKEVVDPAVVVSFPT--DKGYSXXXXXXXXXXXXSNLALCVNPKLIY 245
CSTPLSNFE+GQNYK+VVDPAV V F SNLAL V+P ++Y
Sbjct: 187 CSTPLSNFEAGQNYKDVVDPAVFVGFKLLDCPNRQLVAWTTTPWTLPSNLALVVHPDMLY 246
Query: 246 IKIQENKTGTCYVIQESRFPVIFKNTTDFMILEKFPGEKLKGIKYTPVFDYF--VGQCPT 303
+ ++ TG YV+ E R + KN + ++EK G +LK ++Y P+F YF + +
Sbjct: 247 VVTKDKTTGIEYVVLEERLGEL-KND-NLEVIEKLAGSQLKDLRYEPLFPYFAYMREERN 304
Query: 304 AYQVLTDGYVTDDSGTGVVHQAPYFGEDDFRVCLAAGLITKDQEIICPVDSSGRFTEPVK 363
A++VL D +VT DSGTGVVHQAPYFGE DF+VC+A G+I KDQ++ICPVD SG++T V
Sbjct: 305 AFRVLNDTFVTSDSGTGVVHQAPYFGEIDFQVCVANGVIAKDQKMICPVDESGKYTSEVP 364
Query: 364 DFLGQHVKDADKNIIANLKARNRLVQLGQVKHSYPFCWRSETPLIYKAVPSWFVRVEQMS 423
D+ G +VKDADK II LK LV+ +VKHSYPFCWRS+TPL+YKAVPSWF+ VE +
Sbjct: 365 DYQGVYVKDADKLIIKRLKEMGNLVRQAEVKHSYPFCWRSDTPLLYKAVPSWFINVETLI 424
Query: 424 LDLLKSSEATNWVPEYVKEKRFGNWLKEARDWAISRNRYWGTPIPLWISTDKQEVVCIGS 483
LL +++ T WVP +VKEKRF NWL++ARDWA+SRNR+WGTPI LW+S D +EVVC+GS
Sbjct: 425 PRLLANNDETYWVPAFVKEKRFANWLRDARDWAVSRNRFWGTPINLWVSEDGEEVVCVGS 484
Query: 484 IAELQALTGKEITDLHRESIDHLEIPSMRPGQPPLRRVSEVFDCWFESGSMPYAQCHYPF 543
IAEL+ L+G++ITDLHRES+D + IPS R G+ L+RVSEVFDCWFESGSMPYAQ HYPF
Sbjct: 485 IAELEELSGQKITDLHRESVDDVTIPS-RSGRGVLKRVSEVFDCWFESGSMPYAQNHYPF 543
Query: 544 ENKKEFEEIFPANFIAEGIDQTRGWFYTLIVLSTALFKKPPFKNLIANGLVLASDGQKMS 603
EN+K FE+ FPA+FIAEGIDQTRGWFYTL+VLSTALF KPPFKNLI NGLVLASDG KMS
Sbjct: 544 ENRKIFEDNFPADFIAEGIDQTRGWFYTLLVLSTALFNKPPFKNLICNGLVLASDGAKMS 603
Query: 604 KRKKNYPDPLEVVIQYGADALRLYLINSPVVKAENLRFKEEGVRDIVKDVFLPWYNAFRF 663
K KKNYPDP+ +V +YGADALRLYLINSPVV+ ENLRF+EEGVRD++KDVFLPW+NA+RF
Sbjct: 604 KSKKNYPDPMLIVNKYGADALRLYLINSPVVRGENLRFREEGVRDLLKDVFLPWFNAYRF 663
Query: 664 LMQNVERLVQEDHVDYRFNEKAIRENVMDKWITSFTQSLIQFVKKEMAAYRLYTVVPRLT 723
+QNV+ E + N ENVMD+WI SFT SL+ FV+KEM +YRLY VV LT
Sbjct: 664 FVQNVQAYEHETGNVFDMNVHVASENVMDRWIESFTNSLVAFVRKEMDSYRLYAVVGPLT 723
Query: 724 KFIDHLTNWYVRMNRKRLKGDNGVQDCQVALDTLFGVLFDMVRVMAPFTPFLTEFMYKTL 783
KF D LTN Y+R+NRKR+KGDNG+ + AL L VL +VR+MAPFTPF E+++ L
Sbjct: 724 KFFDTLTNIYIRLNRKRVKGDNGLHEQHHALAALGRVLILIVRLMAPFTPFFCEYIWLNL 783
Query: 784 RKLLPGDSLDSVHFNMIPDPRIELVDTNIERAVQRMQSVIELGRVLRDRKTIPIKYPLPE 843
+K++ G + +SVHF M+P P L+D +ER V+ M++VI+L R++RDR+ + +KYPL E
Sbjct: 784 KKVI-GSTEESVHFLMLPKPDESLIDETVERRVEVMRNVIDLVRLVRDREGLAVKYPLKE 842
Query: 844 MIVIHRDTTYLDDVKSLEKYVLEEMNVKKLELTSDKEKHGITLRAEPDHKILGARLKGDF 903
MIVI+RD+ +L+DVKSLE Y+L E+NV+KL ++ DK+K+GITL+AEP+ KILGARLKG+
Sbjct: 843 MIVINRDSQFLEDVKSLESYILLELNVRKLTVSQDKQKYGITLKAEPNFKILGARLKGEQ 902
Query: 904 KAVTQALKS-LDNNQCEKIITNGFVELVGQKIDVSEIRLIFQATGSDQ---YEAHSDNDV 959
K V LK+ + ++ EK + G + ++G ++ E+ + + A GSDQ Y+ HSD
Sbjct: 903 KKVADYLKNQITESELEKFLLEGKLTVLGHELSSEEVAVSY-AAGSDQGHGYKTHSDAKT 961
Query: 960 LILLNVTPDQDMLDEGFSREIINRVQKLRKKAHLVPTDEVDVYFSVAKT-SDILRIINLH 1018
+++++ T D+ +++EG RE+ NRVQ+LRK+A LV TD V+ V+ S + +++
Sbjct: 962 IVMIDTTEDESLIEEGLCREVTNRVQRLRKQAKLVSTDTAHVHIVVSPADSQLAKVVAAK 1021
Query: 1019 REFIESTVRAPLIPIEQLSPTKPLIVEEAQELKGSQLKL 1057
I S P+ + K +K S+++L
Sbjct: 1022 LNDIVSATGTPIKLGSPPAAAKAPTATSKSAIKDSEVEL 1060
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 198 bits (483), Expect = 2e-50
Identities = 223/891 (25%), Positives = 382/891 (42%), Gaps = 91/891 (10%)
Query: 44 YSFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQQGYHVERRFGWDCHGLPVEFEIDKTL 103
+ DGPP+A G H GH + +KD V + GY V R GWDCHGLP+E +I K
Sbjct: 89 FELLDGPPYANGEAHTGHAINKILKDFVVKSRIALGYRVLFRPGWDCHGLPIELKIGKQQ 148
Query: 104 GIKGPEDVHKLGIDKYNAECRKIVMKYAADWENIITRMGRWIDFKNDYKTLYPWFMESIW 163
G G + A R + + N R G D++ Y T P ++ +
Sbjct: 149 GNAGSRTPLET-----RAAARIVADEAIGKQMNAFRRWGVTADWEKPYVTKSPSYVAAQL 203
Query: 164 WVFKELYNKGLVYQGVKVMPYSTACSTPLSNFESGQNYKEVVDPAV----VVSFPTD--- 216
+F +L + LVY+ K + +S + +T L+ E N K A +++F +
Sbjct: 204 DIFAKLVEQKLVYRSFKPVYWSPSSNTALAESELEYNDKHQSTSAYFRFKLINFSSSDVI 263
Query: 217 ---------KGYSXXXXXXXXXXXXSNLALCVNPKLIYIKIQ-----ENKTGTCYVIQES 262
+ N A+ V+ + Y IQ N T T YVI S
Sbjct: 264 WAHSEPSKISQFFALIWTTTPWTLPLNNAISVSSAIQYSLIQFDNEINNPTSTFYVIA-S 322
Query: 263 RFPVIFKNTTD--FMILEKFPGEKLKGIKYTPVFDYFVGQCPTAYQVLTDGYVTDDSGTG 320
+ F+ ++D ++ L G +Y + +G + +VTD GTG
Sbjct: 323 KLLEEFQKSSDRKCKVVGTVKPANLIGRRYKSCWHNELG-----LPIYEGPHVTDTVGTG 377
Query: 321 VVHQAPYFGEDDFRVCLAAGLITKDQEIICPVDSSGRFTEPV-KDFLGQHVKDADKNIIA 379
+VH A G D+ V I+K + VDS G +T + D G+ V + I
Sbjct: 378 LVHTAFAHGFQDYDVA-----ISKGDRVESFVDSRGCYTRHLGHDLDGKEVLGEGQKIAL 432
Query: 380 NLKARNRLVQLGQVKHSYPFCWRSETPLIYKAVPSWFVRVEQMSLDLLKSSEATNWVPEY 439
L + +V + + HSYP+ WR++ P+I ++ WF+ V+++ ++S + +
Sbjct: 433 RL-LNHDIVHVSKHVHSYPYDWRTKKPVIIRSSEQWFIDVDEIGK---RASMMLDDISVA 488
Query: 440 VKEKRFGNWLKEA----RDWAISRNRYWGTPIPLWISTDKQEVVCIGSIAELQALTG-KE 494
+ LK+ + W ISR R WGTPIP + + I + LT +E
Sbjct: 489 AGDSDLRASLKQLVTTRKSWCISRQRVWGTPIPALVDDNGGSYTSRKLIEWVAKLTRERE 548
Query: 495 ITD----------LHRESIDH-LEIPSMRPGQPPLRRVSEVFDCWFESGSMPYAQCHYPF 543
TD L E + LEIPS Q L++ +++ D W +SG H
Sbjct: 549 NTDVWWEIDVKEILENEEVRRSLEIPSDIVSQ--LKKNTDIMDVWLDSG----LAWHAAR 602
Query: 544 ENKKEFEEIFPANFIAEGIDQTRGWFYTLIVLSTALFKKPPFKNLIANGLVLASDGQKMS 603
+N E E + A+ + EG+DQ RGWF +L++ S A+ K P+K +I +G + + KMS
Sbjct: 603 DNDTEREHV--ADVVLEGVDQFRGWFQSLLLTSVAVQNKLPYKKIIVHGFCIDENNNKMS 660
Query: 604 KRKKNYPDPLEVV------IQYGADALRLYLINSPVVKAENLRFKEEGVRDIVKDVFLPW 657
K N DP + GAD LR ++ S A + + + D+ K V + +
Sbjct: 661 KSIGNVVDPTMLTDGSLKQKAIGADGLRFWVALSGSENAGESKIGMKIIDDVDKKV-IAF 719
Query: 658 YNAFRFLMQNVERLVQEDHVDYRFNEKAIRENVMDKWITSFTQSLIQFVKKEMAAYRLYT 717
N FRF++ + D +F K + +++ +S++ + ++ T
Sbjct: 720 RNGFRFMIGGCQGF---DGKQVKFPLKTLDIDMLQNCDAIVKRSIVNY-----NDFKFRT 771
Query: 718 VVPRLTKFID-HLTNWYVRMNRKRLKGDNGVQDCQVALD-TLFGVLFDMVRVMAPFTPFL 775
V LT+F+ + + YV+ R RL D + ++ TL + ++ +++P P L
Sbjct: 772 VANDLTQFLQRNFSANYVKYVRDRLYCDKVGSESHISAQFTLHRLAHNLAHIISPILPHL 831
Query: 776 TEFMYKTLRKLLPGDSLDSVHFNMIPDPRIELVDTNIERAVQRMQSVIELGRVLRDRKTI 835
+ + + LPG + D L+ T ++ + M+ V E+ R L +
Sbjct: 832 S----SEVLQHLPGSHEKQILRLKFEDLHYGLL-TPHDQLSKHMKFVYEV-RNLLESTAG 885
Query: 836 PIKYPLPEMIVIHRDTTYLDDVKSLEKYVLEEMNVKKLELTSDKEKHGITL 886
P + IV+ Y ++ E + E +NV ++ L +++++ + L
Sbjct: 886 PKIDTSKKGIVLQVTPEYHTILRIYESELPELLNVSQVILHENRDENSVEL 936
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 198 bits (483), Expect = 2e-50
Identities = 223/891 (25%), Positives = 382/891 (42%), Gaps = 91/891 (10%)
Query: 44 YSFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQQGYHVERRFGWDCHGLPVEFEIDKTL 103
+ DGPP+A G H GH + +KD V + GY V R GWDCHGLP+E +I K
Sbjct: 89 FELLDGPPYANGEAHTGHAINKILKDFVVKSRIALGYRVLFRPGWDCHGLPIELKIGKQQ 148
Query: 104 GIKGPEDVHKLGIDKYNAECRKIVMKYAADWENIITRMGRWIDFKNDYKTLYPWFMESIW 163
G G + A R + + N R G D++ Y T P ++ +
Sbjct: 149 GNAGSRTPLET-----RAAARIVADEAIGKQMNAFRRWGVTADWEKPYVTKSPSYVAAQL 203
Query: 164 WVFKELYNKGLVYQGVKVMPYSTACSTPLSNFESGQNYKEVVDPAV----VVSFPTD--- 216
+F +L + LVY+ K + +S + +T L+ E N K A +++F +
Sbjct: 204 DIFAKLVEQKLVYRSFKPVYWSPSSNTALAESELEYNDKHQSTSAYFRFKLINFSSSDVI 263
Query: 217 ---------KGYSXXXXXXXXXXXXSNLALCVNPKLIYIKIQ-----ENKTGTCYVIQES 262
+ N A+ V+ + Y IQ N T T YVI S
Sbjct: 264 WAHSEPSKISQFFALIWTTTPWTLPLNNAISVSSAIQYSLIQFDNEINNPTSTFYVIA-S 322
Query: 263 RFPVIFKNTTD--FMILEKFPGEKLKGIKYTPVFDYFVGQCPTAYQVLTDGYVTDDSGTG 320
+ F+ ++D ++ L G +Y + +G + +VTD GTG
Sbjct: 323 KLLEEFQKSSDRKCKVVGTVKPANLIGRRYKSCWHNELG-----LPIYEGPHVTDTVGTG 377
Query: 321 VVHQAPYFGEDDFRVCLAAGLITKDQEIICPVDSSGRFTEPV-KDFLGQHVKDADKNIIA 379
+VH A G D+ V I+K + VDS G +T + D G+ V + I
Sbjct: 378 LVHTAFAHGFQDYDVA-----ISKGDRVESFVDSRGCYTRHLGHDLDGKEVLGEGQKIAL 432
Query: 380 NLKARNRLVQLGQVKHSYPFCWRSETPLIYKAVPSWFVRVEQMSLDLLKSSEATNWVPEY 439
L + +V + + HSYP+ WR++ P+I ++ WF+ V+++ ++S + +
Sbjct: 433 RL-LNHDIVHVSKHVHSYPYDWRTKKPVIIRSSEQWFIDVDEIGK---RASMMLDDISVA 488
Query: 440 VKEKRFGNWLKEA----RDWAISRNRYWGTPIPLWISTDKQEVVCIGSIAELQALTG-KE 494
+ LK+ + W ISR R WGTPIP + + I + LT +E
Sbjct: 489 AGDSDLRASLKQLVTTRKSWCISRQRVWGTPIPALVDDNGGSYTSRKLIEWVAKLTRERE 548
Query: 495 ITD----------LHRESIDH-LEIPSMRPGQPPLRRVSEVFDCWFESGSMPYAQCHYPF 543
TD L E + LEIPS Q L++ +++ D W +SG H
Sbjct: 549 NTDVWWEIDVKEILENEEVRRSLEIPSDIVSQ--LKKNTDIMDVWLDSG----LAWHAAR 602
Query: 544 ENKKEFEEIFPANFIAEGIDQTRGWFYTLIVLSTALFKKPPFKNLIANGLVLASDGQKMS 603
+N E E + A+ + EG+DQ RGWF +L++ S A+ K P+K +I +G + + KMS
Sbjct: 603 DNDTEREHV--ADVVLEGVDQFRGWFQSLLLTSVAVQNKLPYKKIIVHGFCIDENNNKMS 660
Query: 604 KRKKNYPDPLEVV------IQYGADALRLYLINSPVVKAENLRFKEEGVRDIVKDVFLPW 657
K N DP + GAD LR ++ S A + + + D+ K V + +
Sbjct: 661 KSIGNVVDPTMLTDGSLKQKAIGADGLRFWVALSGSENAGESKIGMKIIDDVDKKV-IAF 719
Query: 658 YNAFRFLMQNVERLVQEDHVDYRFNEKAIRENVMDKWITSFTQSLIQFVKKEMAAYRLYT 717
N FRF++ + D +F K + +++ +S++ + ++ T
Sbjct: 720 RNGFRFMIGGCQGF---DGKQVKFPLKTLDIDMLQNCDAIVKRSIVNY-----NDFKFRT 771
Query: 718 VVPRLTKFID-HLTNWYVRMNRKRLKGDNGVQDCQVALD-TLFGVLFDMVRVMAPFTPFL 775
V LT+F+ + + YV+ R RL D + ++ TL + ++ +++P P L
Sbjct: 772 VANDLTQFLQRNFSANYVKYVRDRLYCDKVGSESHISAQFTLHRLAHNLAHIISPILPHL 831
Query: 776 TEFMYKTLRKLLPGDSLDSVHFNMIPDPRIELVDTNIERAVQRMQSVIELGRVLRDRKTI 835
+ + + LPG + D L+ T ++ + M+ V E+ R L +
Sbjct: 832 S----SEVLQHLPGSHEKQILRLKFEDLHYGLL-TPHDQLSKHMKFVYEV-RNLLESTAG 885
Query: 836 PIKYPLPEMIVIHRDTTYLDDVKSLEKYVLEEMNVKKLELTSDKEKHGITL 886
P + IV+ Y ++ E + E +NV ++ L +++++ + L
Sbjct: 886 PKIDTSKKGIVLQVTPEYHTILRIYESELPELLNVSQVILHENRDENSVEL 936
>U53155-2|AAC48266.2| 918|Caenorhabditis elegans Valyl trna
synthetase protein 1 protein.
Length = 918
Score = 107 bits (257), Expect = 5e-23
Identities = 139/578 (24%), Positives = 238/578 (41%), Gaps = 66/578 (11%)
Query: 50 PPFATGLPHYGHILAGTIKDVVTRYAHQQGYHVERRFGWDCHGLPVEFEIDKTLGIKGPE 109
PP TG H GH L ++D + R+ QG E G+D G+ + ++K L G
Sbjct: 5 PPNVTGKLHLGHALTVAVEDAICRHQRNQGNKAEWIPGFDHAGIATQVVVEKILAKNGKR 64
Query: 110 DVHKLGIDKYNAECRKIVMKYAADWENIITRMGRWIDFKNDYKTLYPWFMESIWWVFKEL 169
+ ++ +++ EC K +++ +TRMG +D+ Y TL F E++ F L
Sbjct: 65 RL-EMTREEFVKECHLWGEKCSSEIRQQLTRMGASLDWTQSYYTLDSKFSEAVTKAFCIL 123
Query: 170 YNKGLVYQGVKVMPYSTACSTPLSNFESGQNYKEVVDPAVVVSFPTDKGYSXXXXXXXXX 229
+ L+ +G +++ + C T S S + + V ++ + G
Sbjct: 124 EQEDLITRGKRLVHW---CPTLSSTLSSQEVNRIDVPSDGYINLSSSSGTRRRVKFGQMH 180
Query: 230 XXXSNLALCVNPKLIYIKIQENKTGTCYVIQESRFPVIFKNTTDFMILEKFPGEKLKGIK 289
NL V+ + +I++ + T + + V D KF G+ +
Sbjct: 181 VIRYNL---VDSESEFIEVGTTRPETLF----ADVAVAVHPEDDRY--SKFHGKHVWS-P 230
Query: 290 YTPVFDYFVGQCPTAYQVLTDGYVTDDSGTGVVHQAPYFGEDDFRV----CLAAGLITKD 345
TP FV +TD V+ + GTG V P D+ + L AG T +
Sbjct: 231 VTPGRKLFV---------ITDSAVSVEKGTGAVKITPSHDALDYEIWNRWILNAGQNTIE 281
Query: 346 QEIICPVDSSGRFTEPVKDFLGQHVKDADKNIIANLKARNRLVQLGQVKHS---YPFCWR 402
E C +D+ G+ T +DF G +A + +I L G +KH C R
Sbjct: 282 -EFAC-IDAEGKMTNSGEDFDGMDRFEAREKVIQKLSELGNYN--GLMKHEGAQVNICSR 337
Query: 403 SETPLIYKAVPSWFVRVEQM---SLDLLKSSEATNWVPEYVKEKRFGNWLKEARDWAISR 459
+ + + WF+ + M S D +KS + + PEY + R +W + W +SR
Sbjct: 338 TGDIIEPRLTEQWFLDCKDMFARSADAIKSGKIEVF-PEY-QSHRLADWFENQEPWCLSR 395
Query: 460 NRYWGTPIPLWISTDKQEVVCIGSIAELQALTGKEITDLHRESIDHLEIPSMRPGQPPLR 519
+WG IP + + ++ T +E + RE D ++ Q P
Sbjct: 396 QLWWGHRIPAY---------NVPGQSKWMVTTDEE--EARRELGDKMQ-------QDP-- 435
Query: 520 RVSEVFDCWFESGSMPYAQCHYPFENKKEFEEIFPANFIAEGIDQTRGWFYTLIVLSTAL 579
+V D WF S +P + + + + N + G D + W +I L+ L
Sbjct: 436 ---DVLDTWFSSALVPLVKNGWLEGAPIQTPSL---NVMETGWDISGFWVARMIALNMKL 489
Query: 580 FK-KPPFKNLIANGLVLASDGQKMSKRKKNYPDPLEVV 616
+ PF ++ +GLV ++G+KMSK N DPL+V+
Sbjct: 490 SSGETPFGKVVLHGLVRDNEGRKMSKSLGNVIDPLDVL 527
Score = 38.7 bits (86), Expect = 0.025
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 688 ENVMDKWITSFTQSLIQFVKKEMAAYRLYTVVPRLTKFI-DHLTNWYVRMNRKRLKGDNG 746
+ ++D+WI + + + V M + L+ + L KFI + + Y+ +K L +N
Sbjct: 627 DRLVDEWIMARLSTTVSTVDAHMNKFSLHLALSTLHKFITSDICDIYLESTKKAL-WNND 685
Query: 747 VQDCQVALDTLFGVLFDMVRVMAPFTPFLTEFMYKTLRKLLPGDSLDSV 795
+ + A L VL + + F PF++E++Y+ + K G L V
Sbjct: 686 IARIREARSILQRVLQPTLVQLNAFMPFVSEYIYERIFKRETGSILFDV 734
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 104 bits (250), Expect = 3e-22
Identities = 92/363 (25%), Positives = 156/363 (42%), Gaps = 17/363 (4%)
Query: 307 VLTDGYVTDDSGTGVVHQAPYFGEDDFRVCLAAGLITKDQEIICPVDSSGRFTEPVKDFL 366
+ D +V + GTG V P +D+ V + L + C D G ++ +F
Sbjct: 357 IFADSFVEMEFGTGAVKITPAHDHNDYEVGIRQNLPFHN----CITDD-GLISQGCGEFS 411
Query: 367 GQHVKDADKNIIANLKARNRLVQLGQVKHSYPFCWRSETPLIYKAVPSWFVRVEQMSLDL 426
G DA +I LK + P C RS+ + P W+V+ M+
Sbjct: 412 GMKRFDARTAVIEALKEKGLYRGKEDNPMVVPTCSRSKDVIEPILKPQWYVKCAHMAEKA 471
Query: 427 LKS--SEATNWVPEYVKEKRFGNWLKEARDWAISRNRYWGTPIPLW-IS-TDKQEVVCIG 482
+ + + +PE+ K + WL+ +RDW ISR +WG IP + IS D +E
Sbjct: 472 VAAVANGDLQIIPEFHKAT-WNRWLESSRDWCISRQLWWGHRIPAYYISFADGREQPLPE 530
Query: 483 SIAELQALTGKEITDLHRESIDHLEIPSMRPGQPPLRRVSEVFDCWFESGSMPYAQCHYP 542
+ A T +E ++ ++P + L+ +V D WF SG P+A +P
Sbjct: 531 ENYWVSARTEQEAL---AKAAQKFQVPE---AEILLKWDEDVLDTWFSSGMWPFAVFGWP 584
Query: 543 FENKKEFEEIFPANFIAEGIDQTRGWFYTLIVLSTALFKKPPFKNLIANGLVLASDGQKM 602
+ K+ + FP + G D W ++ ++ L K PFK ++ + ++ + G+KM
Sbjct: 585 -DATKDMDLFFPGAVLETGHDILFFWVARMVFMAQELTGKLPFKEILLHAMIRDAHGRKM 643
Query: 603 SKRKKNYPDPLEVVIQYGADALRLYLINSPVVKAENLRFKEEGVRDIVKDVFLPWYNAFR 662
SK N DPL+V+ + L+ L+ + + E KE RD + +A R
Sbjct: 644 SKSLGNVIDPLDVIRGISLNDLQAQLLGGNLDEKEIAVAKEGQARDYPDGIPECGVDALR 703
Query: 663 FLM 665
F +
Sbjct: 704 FAL 706
Score = 60.1 bits (139), Expect = 9e-09
Identities = 36/147 (24%), Positives = 67/147 (45%)
Query: 50 PPFATGLPHYGHILAGTIKDVVTRYAHQQGYHVERRFGWDCHGLPVEFEIDKTLGIKGPE 109
PP TG H GH LA T++D +TR+ G G D G+ + ++K L +
Sbjct: 126 PPNVTGNLHVGHALATTVEDTITRFNRMHGKRTLFNPGCDHAGIATQVVVEKRLKRERGL 185
Query: 110 DVHKLGIDKYNAECRKIVMKYAADWENIITRMGRWIDFKNDYKTLYPWFMESIWWVFKEL 169
H LG D++N E + + ++G +D+ T+ P ++ F +
Sbjct: 186 TRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPKMCRAVTEAFIRM 245
Query: 170 YNKGLVYQGVKVMPYSTACSTPLSNFE 196
+ G +Y+ +++ +S A + +S+ E
Sbjct: 246 HESGTIYRSNRLVNWSCALRSAISDIE 272
Score = 36.7 bits (81), Expect = 0.10
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 587 NLIANGLVLASDGQKMSKRKKNYPDPLEVVIQYGADALRLYLINSPVVKAENLRFKEEGV 646
NL + +A +GQ ++YPD + + G DALR L+ S + ++ V
Sbjct: 673 NLDEKEIAVAKEGQA-----RDYPDGIP---ECGVDALRFALL-SYTSQGRDINLDVLRV 723
Query: 647 RDIVKDVFLPWYNAFRFLMQNVERLVQEDHVDYRFNEKAIRENVMDKWITSFTQSLIQFV 706
K W RF + + E + N K+ D WI S ++
Sbjct: 724 HGYRKFCNKLW-QVVRFALARISDK-PEQKPTFEINLKSATPT--DLWILSRLAKAVKET 779
Query: 707 KKEMAAYRLYTVVPRLTKF-IDHLTNWYVRMNRKRLKGDNGVQDCQVALDTLFGVLFDMV 765
+ + AY F + + YV + L GDN QVA+ L + +
Sbjct: 780 NEALKAYNFTQATTVTYNFWLYDFCDVYVETIKPVLYGDNTTLR-QVAISVLHKCIDTGL 838
Query: 766 RVMAPFTPFLTEFMYKTLRKLLPGD 790
R+++P PF++E +++ + +L D
Sbjct: 839 RLISPLMPFISEELWQRMPRLDDSD 863
>Z73912-2|CAA98144.4| 859|Caenorhabditis elegans Hypothetical
protein ZK524.3a protein.
Length = 859
Score = 54.8 bits (126), Expect = 4e-07
Identities = 49/164 (29%), Positives = 67/164 (40%), Gaps = 21/164 (12%)
Query: 16 AEEDKILE-FWKK--IDAFQTCL-KQSKSRPKYSFYDGPPFATGLPHYGHILAGTIKDVV 71
+E K+LE W K +D+F++ K S K P+ +G H GH+ TI D
Sbjct: 27 SENTKMLEKHWSKSLVDSFESSKNKPSNLNGKKYILSMFPYPSGRLHIGHMRVYTISDAT 86
Query: 72 TRYAHQQGYHVERRFGWDCHGLPVEFEIDKTLGIKGPEDVHKLGIDKYNAECRKIVMKYA 131
RY GY V GWD GLP E + G+ P + I+ + K K
Sbjct: 87 ARYYRLNGYEVIHPIGWDSFGLPAE-NAARDKGV-DPREWTINNIESMKQQLLK--TKIL 142
Query: 132 ADWENIITRMGRWIDFKNDYKTLYPWFMESIWWVFKELYNKGLV 175
DWE I+ T P F W+F +L+ GLV
Sbjct: 143 FDWEKEIS-------------TCEPEFFRWTQWIFCKLFEYGLV 173
Score = 36.7 bits (81), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 454 DWAISRNRYWGTPIPLWISTD-KQEVVCIGSIAELQALTGKEI 495
DW +SR R WGTPIP+ + D K+ V + + L + G+E+
Sbjct: 390 DWVVSRQRGWGTPIPMIQTKDGKRVAVQLNKLPVLGSDRGQEV 432
>Z73912-3|CAE18063.1| 828|Caenorhabditis elegans Hypothetical
protein ZK524.3b protein.
Length = 828
Score = 51.6 bits (118), Expect = 3e-06
Identities = 45/154 (29%), Positives = 61/154 (39%), Gaps = 20/154 (12%)
Query: 25 WKK--IDAFQTCL-KQSKSRPKYSFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQQGYH 81
W K +D+F++ K S K P+ +G H GH+ TI D RY GY
Sbjct: 6 WSKSLVDSFESSKNKPSNLNGKKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYE 65
Query: 82 VERRFGWDCHGLPVEFEIDKTLGIKGPEDVHKLGIDKYNAECRKIVMKYAADWENIITRM 141
V GWD GLP E + G+ P + I+ + K K DWE I+
Sbjct: 66 VIHPIGWDSFGLPAE-NAARDKGV-DPREWTINNIESMKQQLLK--TKILFDWEKEIS-- 119
Query: 142 GRWIDFKNDYKTLYPWFMESIWWVFKELYNKGLV 175
T P F W+F +L+ GLV
Sbjct: 120 -----------TCEPEFFRWTQWIFCKLFEYGLV 142
Score = 36.7 bits (81), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 454 DWAISRNRYWGTPIPLWISTD-KQEVVCIGSIAELQALTGKEI 495
DW +SR R WGTPIP+ + D K+ V + + L + G+E+
Sbjct: 359 DWVVSRQRGWGTPIPMIQTKDGKRVAVQLNKLPVLGSDRGQEV 401
>AB096633-1|BAC76733.1| 828|Caenorhabditis elegans leucyl-tRNA
synthetase (mitochondrial)protein.
Length = 828
Score = 51.6 bits (118), Expect = 3e-06
Identities = 45/154 (29%), Positives = 61/154 (39%), Gaps = 20/154 (12%)
Query: 25 WKK--IDAFQTCL-KQSKSRPKYSFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQQGYH 81
W K +D+F++ K S K P+ +G H GH+ TI D RY GY
Sbjct: 6 WSKSLVDSFESSKNKPSNLNGKKYILSMFPYPSGRLHIGHMRVYTISDATARYYRLNGYE 65
Query: 82 VERRFGWDCHGLPVEFEIDKTLGIKGPEDVHKLGIDKYNAECRKIVMKYAADWENIITRM 141
V GWD GLP E + G+ P + I+ + K K DWE I+
Sbjct: 66 VIHPIGWDSFGLPAE-NAARDKGV-DPREWTINNIESMKQQLLK--TKILFDWEKEIS-- 119
Query: 142 GRWIDFKNDYKTLYPWFMESIWWVFKELYNKGLV 175
T P F W+F +L+ GLV
Sbjct: 120 -----------TCEPEFFRWTQWIFCKLFEYGLV 142
Score = 36.7 bits (81), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 454 DWAISRNRYWGTPIPLWISTD-KQEVVCIGSIAELQALTGKEI 495
DW +SR R WGTPIP+ + D K+ V + + L + G+E+
Sbjct: 359 DWVVSRQRGWGTPIPMIQTKDGKRVAVQLNKLPVLGSDRGQEV 401
>Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 43.2 bits (97), Expect = 0.001
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 18 EDKILEFWKKIDAFQTCLKQSKSRPKYSFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQ 77
E I E W+ AF+ + +PKY P+ G H GH + + + +
Sbjct: 18 EKSIQELWESKKAFEADARDD-GKPKYLVTFPFPYMNGRLHLGHTFSASKCEFAAGFQRL 76
Query: 78 QGYHVERRFGWDCHGLPVEFEIDK 101
QG V FG+ C G+P++ DK
Sbjct: 77 QGKEVLFPFGFHCTGMPIKACADK 100
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 546 KKEFEEIFPANFIAEGIDQTRGWFYTLIVLSTALF----KKPPFKNLIANGLVLASDGQK 601
+KEF +P + A G D L+ A++ K P K + ANG +L ++ +K
Sbjct: 661 RKEFMYWYPIDMRASGKDLIGNHLTYLLFNHAAIWPTDTSKWP-KGIRANGHLLLNN-EK 718
Query: 602 MSKRKKNYPDPLEVVIQYGADALRLYLINS 631
MSK N+ E + ++ AD +RL L ++
Sbjct: 719 MSKSTGNFMTLEEAIEKFSADGMRLSLADA 748
>Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 43.2 bits (97), Expect = 0.001
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 18 EDKILEFWKKIDAFQTCLKQSKSRPKYSFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQ 77
E I E W+ AF+ + +PKY P+ G H GH + + + +
Sbjct: 18 EKSIQELWESKKAFEADARDD-GKPKYLVTFPFPYMNGRLHLGHTFSASKCEFAAGFQRL 76
Query: 78 QGYHVERRFGWDCHGLPVEFEIDK 101
QG V FG+ C G+P++ DK
Sbjct: 77 QGKEVLFPFGFHCTGMPIKACADK 100
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 546 KKEFEEIFPANFIAEGIDQTRGWFYTLIVLSTALF----KKPPFKNLIANGLVLASDGQK 601
+KEF +P + A G D L+ A++ K P K + ANG +L ++ +K
Sbjct: 661 RKEFMYWYPIDMRASGKDLIGNHLTYLLFNHAAIWPTDTSKWP-KGIRANGHLLLNN-EK 718
Query: 602 MSKRKKNYPDPLEVVIQYGADALRLYLINS 631
MSK N+ E + ++ AD +RL L ++
Sbjct: 719 MSKSTGNFMTLEEAIEKFSADGMRLSLADA 748
>AC024201-7|AAF36018.2| 321|Caenorhabditis elegans Hypothetical
protein Y71F9B.2 protein.
Length = 321
Score = 33.1 bits (72), Expect = 1.2
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 17/122 (13%)
Query: 892 HKILGARLKGDFKAVTQALKSLDNNQCEKIITNGFVEL--VGQKIDVSEIRLIFQATGSD 949
HKI+G GDF+ V D N+ KI+ + EL V + + + RL + +
Sbjct: 168 HKIVGLSYTGDFRMVV----GEDKNKINKIVEGNYEELLRVYEPLMNDDARLSVMSP-AK 222
Query: 950 QYEAHSDNDVLILLNVTPDQDMLDEGFSREIINRVQKLRKKAHLVPTDEVDVYFSVAKTS 1009
+ S + LN+ P E++NR+QK + D +V FS+A
Sbjct: 223 LIQDGSTTAIYHRLNLLPS----------EVLNRIQKNMNRVQKRQRDAEEVIFSLAHRH 272
Query: 1010 DI 1011
D+
Sbjct: 273 DV 274
>Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical protein
R06C7.1 protein.
Length = 945
Score = 32.3 bits (70), Expect = 2.2
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 1107 KLYDEVNVLFGLYGLKYTLWGDGSEVKDTNNLNTKTIIASAAAPTPHDSKTVPACKFVNV 1166
K+ D +++ YT SE+ D N +K + A D KT+P
Sbjct: 145 KMKDGNQIVYDGQSTLYTTVNLFSEL-DANGTKSKVFQINGADTGNDDLKTLPCISLEIY 203
Query: 1167 ANGTKSFTLFLENPLGKETLDRANAV--KFVTQYLEI 1201
A S TL EN LGK T D+ V + TQ+LE+
Sbjct: 204 APRDNSITLSSEN-LGKRTADQNIEVNNREYTQFLEL 239
>Z19152-7|CAA79539.2| 643|Caenorhabditis elegans Hypothetical protein
B0464.6 protein.
Length = 643
Score = 31.5 bits (68), Expect = 3.8
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 979 EIINRVQKLRKKAHLVPTDEVDVYFSVAKTSDILRIINLHREFIESTVRAPLIPIEQLSP 1038
E I++V K+ K H P V V + D L++ + R+ ++S+ L+P + P
Sbjct: 413 EHIDKVNKILDKEHANPPLRVGV-----SSVDALKLAAIERDSLKSSDLPFLLPFLSVHP 467
Query: 1039 TKPLIVEEAQELKGSQLKLVITWRKDVELPSN 1070
+ ++ +EL +Q W P++
Sbjct: 468 NQKYLISRIKELCATQFMDAYKWNSGGSEPTD 499
>AF067214-10|AAC17009.1| 206|Caenorhabditis elegans Hypothetical
protein F56C3.9 protein.
Length = 206
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 677 VDYRFNEKAIREN--VMDKWITSFTQSLIQ-FVKKEMAAYRLYTVVPRLTKFID 727
+D F + A+ +N V+D+ + T S +Q F K++ YR YT PR F D
Sbjct: 143 IDVVFKKIALIDNPLVVDRLVQEITDSDVQSFFTKKILQYRPYTEKPRPQMFFD 196
>Z82052-4|CAB04827.2| 374|Caenorhabditis elegans Hypothetical protein
T25E12.9 protein.
Length = 374
Score = 30.7 bits (66), Expect = 6.6
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 1085 GVTSNQASIILKDNENKFISLNKLYDEVNVLFGLYGLKY--TLWGDGSEVKDTN 1136
G+ SN SI NEN+F+ LY ++L G Y LW DG++ N
Sbjct: 279 GLCSNSVSIH-SGNENRFVLTLYLYTNSSILIGGIAPSYDFVLWYDGTQTTYNN 331
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 30.7 bits (66), Expect = 6.6
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 265 PVIFKNTTDFMILEKFPGEKLKGIKYTPV--FDYFVGQCPTAYQVLTDGYVTDDS 317
P FK+ TD + LE P + LK K+ + FDYF P QV Y TD S
Sbjct: 927 PKSFKSHTDLLDLEPLPIKTLKNSKFEAIYNFDYF---NPIQAQVFFCLYKTDKS 978
>AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical
protein F55A12.1 protein.
Length = 892
Score = 30.7 bits (66), Expect = 6.6
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 1107 KLYDEVNVLFGLYGLKYTLWGDGSEVKDTNNLNTKTIIASAAAPTPHDSKTVPACKFVNV 1166
K+ D +++ YT SE+ D N +K + A D KT+P
Sbjct: 112 KMKDGNQIVYDGQSTLYTTVNLFSEL-DANGTKSKVFQINGADINNDDLKTLPCISLEIY 170
Query: 1167 ANGTKSFTLFLENPLGKETLDRANAV--KFVTQYLEI 1201
A S TL EN L K T D+ V + TQ+LE+
Sbjct: 171 APRNNSITLSAEN-LSKRTADQNIEVNNREYTQFLEL 206
>AC087079-16|AAO12401.2| 509|Caenorhabditis elegans Hypothetical
protein Y37E3.16 protein.
Length = 509
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 751 QVALDTLFGVLFDMVRVMAPFTP 773
Q+AL+ +F +L D++ +M PFTP
Sbjct: 413 QIALNEVFSILKDIIVIMFPFTP 435
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 30.3 bits (65), Expect = 8.7
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 425 DLLKSSEATNWVPEYVKEKRFGNWL---KEARDWAISRNRYWGTPIPLWISTDKQEVVCI 481
DLL+ + +W P + E F + L +E ++ R+ W W+ KQE V
Sbjct: 53 DLLEHIDE-DWEPVGLDEVEFLSQLWFEQEDQEKKAHRHYDWDEEKKEWVPKAKQEEVNE 111
Query: 482 GSIAELQALTGKEITDLHRESIDHLE 507
IAE QA G + D++++ + L+
Sbjct: 112 DFIAEYQANYGVQYDDIYKKMDEELQ 137
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.138 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,038,873
Number of Sequences: 27539
Number of extensions: 1403558
Number of successful extensions: 3335
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3285
Number of HSP's gapped (non-prelim): 39
length of query: 1212
length of database: 12,573,161
effective HSP length: 90
effective length of query: 1122
effective length of database: 10,094,651
effective search space: 11326198422
effective search space used: 11326198422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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