Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001557-TA|BGIBMGA001557-PA|IPR005821|Ion transport,
IPR010526|Sodium ion transport-associated, IPR001696|Na+ channel,
IPR002048|Calcium-binding EF-hand
         (1969 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    29   0.42 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    28   0.73 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    27   1.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    27   1.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    27   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   1.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    26   3.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    25   6.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   9.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   9.0  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    24   9.0  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
            candidate 61 protein.
          Length = 670

 Score = 28.7 bits (61), Expect = 0.42
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 6/123 (4%)

Query: 1601 LFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAM 1660
            L  F  ++FS      +  + K  V  TL  +V V+ +        G  G +T+L     
Sbjct: 262  LIQFNTIVFSFCYCYYNSKMTKDGVYNTLFFIVYVSLLLGPHPTYFGKTGRKTVL----- 316

Query: 1661 SLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKGGLDDVYNFKTFVQSMILLFQMSTSAG 1720
                  N  +L +L +F+  ++  S      +      +YNF TF + +IL+  +S + G
Sbjct: 317  KTNKYCNFIILFYLSVFVILVYYASLD-ETPNPVTNGKLYNFNTFAKLLILVVSLSGTFG 375

Query: 1721 WDG 1723
            + G
Sbjct: 376  FFG 378


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 27.9 bits (59), Expect = 0.73
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)

Query: 354 YTSFDTFGWAFLSAFRLMTQDYWENLYQLFFVVIIFLGSFYLVNLILAIV 403
           Y   D F  + + A   +   +W  LY   F+ IIFL  F+++ LI+ ++
Sbjct: 211 YKQLDYFDGSKVPACHTLANTFWSALY---FLTIIFL--FFIIPLIILLI 255


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory protein
            19 protein.
          Length = 119

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 1778 ENYSQATEDVQEGLTDDDYDMYYEIWQRFDPDGSQYIRYDQLSD 1821
            E   + T+ V   L+ +   M+ E+  ++DPDG  + +Y    D
Sbjct: 75   EKQKEMTKKVIHFLSHNKQQMWKELTAKYDPDGIYFEKYKDKFD 118


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory protein
            16 protein.
          Length = 126

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 1778 ENYSQATEDVQEGLTDDDYDMYYEIWQRFDPDGSQYIRYDQL 1819
            E + +    V   L ++  + + E+  +FDP G    +YD+L
Sbjct: 77   EKHKEGVRKVIHHLIENKPNWWQELESKFDPQGEYKKKYDEL 118


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory protein
            9 protein.
          Length = 126

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 1778 ENYSQATEDVQEGLTDDDYDMYYEIWQRFDPDGSQYIRYDQL 1819
            E + +    V   L ++  + + E+  +FDP G    +YD+L
Sbjct: 77   EKHKEGVRKVIHHLIENKPNWWQELESKFDPQGEYKKKYDEL 118


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 791 LVFDPFVELFITLCIVVNTLFMALDHHNMD---KDMDKALKSGNYLRVFKLAKSWPTLNL 847
           L F P  +L    C  V   F  +D HN +    D +  +  G Y+ V  L +  P L +
Sbjct: 192 LAFSP-EDLDPFACTHVIYAFATIDPHNFNMISNDDESDIIQGGYISVTGLKRVNPKLKV 250

Query: 848 LISI 851
           LIS+
Sbjct: 251 LISV 254


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 25.8 bits (54), Expect = 3.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 493 RMSLRSDPFQDSVSTQPAHKPTATDTHDSA 522
           + S RS P Q  VS  P H+P    T   A
Sbjct: 226 KSSPRSSPVQSDVSLSPVHEPLLITTEKLA 255


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory protein
            4 protein.
          Length = 133

 Score = 24.6 bits (51), Expect = 6.8
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 1778 ENYSQATEDVQEGLTDDDYDMYYEIWQRFDPDGSQYIRY 1816
            E   + ++ +   L D+  D +  +  ++DPDG+   RY
Sbjct: 82   EKQKEGSDFIMRYLIDNKPDYWKALEAKYDPDGTYKKRY 120


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 9.0
 Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 5/70 (7%)

Query: 227 LRTFRVLRALKTVAIVPGLKTIVGAV-IESVKNLRDVIILT----MFSLSVFALMGLQIY 281
           + TF++ R +K +A + GL  +   + +  +K L+ VI+ T    + SL ++ ++    +
Sbjct: 1   MNTFKIFRPIKILAEIFGLSPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMTF 60

Query: 282 MGVLTQKCVK 291
            GV +   +K
Sbjct: 61  SGVTSPTIMK 70


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 9.0
 Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 5/70 (7%)

Query: 227 LRTFRVLRALKTVAIVPGLKTIVGAV-IESVKNLRDVIILT----MFSLSVFALMGLQIY 281
           + TF++ R +K +A + GL  +   + +  +K L+ VI+ T    + SL ++ ++    +
Sbjct: 1   MNTFKIFRPIKILAEIFGLSPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMTF 60

Query: 282 MGVLTQKCVK 291
            GV +   +K
Sbjct: 61  SGVTSPTIMK 70


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
            P450 monooxigenase protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 9.0
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 1082 DNRLDCELNHHGYPIQDDDTISQKSYGSHKIRSFKDESHK 1121
            + RL+ + N  GY    D  +S   YG H    +  E  K
Sbjct: 65   ERRLEVDCNIGGYDFPKDTFLSLFIYGMHHNEKYFPEPEK 104


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,914
Number of Sequences: 317
Number of extensions: 18264
Number of successful extensions: 66
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 53
Number of HSP's gapped (non-prelim): 16
length of query: 1969
length of database: 114,650
effective HSP length: 67
effective length of query: 1902
effective length of database: 93,411
effective search space: 177667722
effective search space used: 177667722
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)