Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001557-TA|BGIBMGA001557-PA|IPR005821|Ion transport,
IPR010526|Sodium ion transport-associated, IPR001696|Na+ channel,
IPR002048|Calcium-binding EF-hand
(1969 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 172 4e-43
SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyc... 35 0.13
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 32 0.93
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 30 2.8
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 30 3.7
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 29 6.5
SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces pombe... 29 6.5
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 29 8.6
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 172 bits (419), Expect = 4e-43
Identities = 150/580 (25%), Positives = 261/580 (45%), Gaps = 45/580 (7%)
Query: 1259 FTVIFFIEMLIKWLALGF----QKYFTNAWCWLDFIIVMVSLINFVAALCGAGGI-QAFK 1313
F IF IE IK +A GF Y + W +DF +++ IN A L + +AF+
Sbjct: 987 FATIFTIEAAIKIIADGFCITPNAYLRSTWNCIDFFVLVTLWINLYAVLTSHALLSRAFR 1046
Query: 1314 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY 1373
+ LR LR + Q R+ +AL+ IF+ +V + FA+ +F G
Sbjct: 1047 AFKALRVLRLINLTQTSQ--RMFHDALISGFFKIFSAAVVSATLLIPFALWAKNVFGGLL 1104
Query: 1374 FKCVDMNHTTLSHEIIPDKNACTLENY------TWENSP-MNFDHVGKAYLCLFQVATFK 1426
+ C D N + S ++ + A T N+ W N P +FD A L LF++A+ +
Sbjct: 1105 YSCNDDNVLSASQCVL--EYASTPNNWEVWAPRVWSNPPDYDFDRFPHALLALFEIASIE 1162
Query: 1427 GWIQIMNDAIDSREVGRQPIRETNIYMYLYXXXXXXXXXXXTLNLFIGVIIDNFNEQKKK 1486
GW+ IM +D QP + ++ L LFI +II N+ E+
Sbjct: 1163 GWVDIMRSVMDITGFNNQPQTNASSGNAMFFVLFNLVSMIYILTLFIAIIISNYAERTGS 1222
Query: 1487 AGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRP---QAIVFEIVTDKKFDMIIM 1543
A F T +Q+ + +K+ S +P K RP RP + + ++ +K +
Sbjct: 1223 A------FFTAEQRAWLELRRKIKSMRPSK---RPAIRPLGLRGLCYDFAV-QKHGIWRR 1272
Query: 1544 LFIGL---NMLTMTLDHYQQSETFSAVLDYLNMIFIVIFSSECLLKIFALRYHYFVEP-W 1599
F GL ++L + Y ++ V + + +I + ++ +K++ L ++YF W
Sbjct: 1273 TFTGLYIVHLLFLLTIFYPCPIAYTYVRNSIFLILSICYTINICVKVYGLSFYYFFHSFW 1332
Query: 1600 NLFDFVVVMFSILSLVLSDIIEKY-FVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFAL 1658
N+FD VV + S+ + I+ K+ S TLL+ + V + L+ L +
Sbjct: 1333 NMFDVVVTLGSLTCNIA--ILAKFENRSLTLLQTTLLVLV--TVHLIPKFDNFDQLSKTV 1388
Query: 1659 AMSLPALFNICLLLFLVMFIFAI-FGMSFFMHVKDKGGLDDVYNFKTFVQSMILLFQMST 1717
SLP++F++ ++ FAI F F + G + NF++ +++LLF M+
Sbjct: 1389 VASLPSIFSLIATWIVLYITFAIAFNQIFGLTKLGLNGGPN-KNFRSIRNALVLLFTMTF 1447
Query: 1718 SAGWDGVL-DGIINEEECDLPDNERGSPGNCGSATIGITYLLSYLVISFLIVINMYIAVI 1776
GW+ V+ D I+ C D+ S +CG+ +++ +IS I +NM+I V+
Sbjct: 1448 GEGWNDVMHDYTISYPNCVNGDDFYNS--DCGNKPWAYGLFIAWNIISMYIFVNMFITVV 1505
Query: 1777 LENYS--QATEDVQEGLTDDDYDMYYEIWQRFDPDGSQYI 1814
+N+S L +D+ + + W FDP + YI
Sbjct: 1506 FDNFSYIHTKSSSFTNLQRNDFRQFKDSWAPFDPMVTGYI 1545
Score = 65.3 bits (152), Expect = 8e-11
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 169 TEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAAL- 227
TEV F I+T E+A+K++A GF + P YLR WN +DF V+ ++ + L + A L
Sbjct: 983 TEVAFATIFTIEAAIKIIADGFCITPNAYLRSTWNCIDFFVLVTLWINLYAVLTSHALLS 1042
Query: 228 RTFRVLRALKTVAIVPGLKT----IVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMG 283
R FR +AL+ + ++ +T A+I + +++ L FAL ++ G
Sbjct: 1043 RAFRAFKALRVLRLINLTQTSQRMFHDALISGFFKIFSAAVVSATLLIPFALWAKNVFGG 1102
Query: 284 VL 285
+L
Sbjct: 1103 LL 1104
Score = 64.5 bits (150), Expect = 1e-10
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 51/323 (15%)
Query: 126 PFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPT------TPTVESTEVIFTGIYTF 179
PF+PI R I HPL+++FI I+++ +L+++ + + T++ ++ +YT
Sbjct: 173 PFSPILR---QIYNHPLYNIFIFVVIVLHAVLLMIRSDDPHDKSQTIDYLIIVIGILYTL 229
Query: 180 ESAVKVMARGFIL------------------QPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
E +K+ GF+ + +YLR +WN +DFV I ++++ I
Sbjct: 230 EMLLKIYLFGFLYDGSSSFYDFINSYTKKTPRTMSYLRHSWNRVDFVAIVALWISV-IGK 288
Query: 222 GNLAALRTFRV---LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 278
R F + LR + + I +TI+ ++ ES L V+ F + A++G+
Sbjct: 289 KQQGIFRLFSMIACLRLTRLLNITRKTETILKSLKESSTPLVQVVSFNAFFGVMIAILGV 348
Query: 279 QIYMGVLTQKCVKVFPEDGSW---GNLTDENWERFCQNETNWYGEGGDYPLCGNSSGAGQ 335
Q + L ++CV + + G +WE + Y + +P N G
Sbjct: 349 QFFKASLNRQCVWLGDYGDQYLPTGQFCGGHWENGIKRA---YLDKNGFPSNVNPRGF-I 404
Query: 336 CEPGYVCLQGFGPNPNYGYTSFDTFGWAFLSAFRLMTQD-YWENLYQ----------LFF 384
C VC NP SFD F + F +M+ + + + +Y L F
Sbjct: 405 CAEKSVC--RVVENPYSNTVSFDNFFNSLELIFVIMSSNGFTDIMYDIMDAEYFVSCLLF 462
Query: 385 VVIIFLGSFYLVNLILAIVAMSY 407
++ + + +L++L++A+V S+
Sbjct: 463 IISAYFLTLWLMSLVIAVVTSSF 485
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 1279 YFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN 1338
Y ++W +DF+ ++ I+ + GI F+ + LR R ++ + ++
Sbjct: 265 YLRHSWNRVDFVAIVALWISVIGKK--QQGI--FRLFSMIACLRLTRLLNITRKTETILK 320
Query: 1339 ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLF 1369
+L ++ + V+ F ++ AI+GVQ F
Sbjct: 321 SLKESSTPLVQVVSFNAFFGVMIAILGVQFF 351
>SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 34.7 bits (76), Expect = 0.13
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 1273 ALGFQKYFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALR-PLRAM---- 1327
ALG A C L+ I ++++ V A C GGI + +R L + PL A+
Sbjct: 336 ALGIFSLLVIALC-LNCISLLIAASREVFAFCRDGGIPGSRYLRLLTKQKVPLNAILLVL 394
Query: 1328 --SRMQGMRVVVNALVQAIPSIFNVLLVCL 1355
S + G+ ++VN V AI S+FN+ ++ L
Sbjct: 395 LYSLLVGLLILVN--VTAISSVFNLAIIAL 422
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 31.9 bits (69), Expect = 0.93
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 583 LPYADDSNAVTPMSEENGAIIIPVYYANLGSRHSSYTSHQSRLSYTSHGDLLGGGKAQTK 642
+P++ DS+ + +++ ++ I + A S +SY+ +++ LSY + G +
Sbjct: 121 IPFSKDSSVFDAVGQQS-SVPIHINPAYTNSHQNSYSLNETYLSYDFFDNHRGASSSAVS 179
Query: 643 EARLRGRSASRNHSV-------TSQPHAYPLPRQDSSLASRPLREYEVSTTECTDEAGKV 695
+ L +++ TS P PL D S E + D+A
Sbjct: 180 KDGLASPRPTKDVDADDTTWYFTSSPSFQPLKDSDRSQTKNTHEETSPIVSSPEDDADAA 239
Query: 696 LKPSS 700
KPSS
Sbjct: 240 FKPSS 244
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 30.3 bits (65), Expect = 2.8
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 11/143 (7%)
Query: 975 DTNKIAEAFNRI----SRFIDWIKRNVADFLKLLKNKLTNQIAIHAPERVDNELELGTDL 1030
+T +I E N I R IDW ++ F +LL + N + D E E L
Sbjct: 401 ETRRIHENRNAIIELEQRVIDWKGYSLQYFGQLLVWDVVNVC------KADIEREYHVYL 454
Query: 1031 DDAVLYKDKKLKDQVEVAIGDGM-EFTIPGDNKYKKGKILMNNINAITDNHRDNRLDCEL 1089
+ +L K++ A M + T D+ KG+IL +NI + NH ++
Sbjct: 455 FEKILLCCKEMSTLKRQARSISMNKKTKRLDSLQLKGRILTSNITTVVPNHHMGSYAIQI 514
Query: 1090 NHHGYPIQDDDTISQKSYGSHKI 1112
G P + + ++ SHK+
Sbjct: 515 FWRGDPQHESFILKLRNEESHKL 537
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 29.9 bits (64), Expect = 3.7
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 1214 LIENTYFETAVITMILLSSLALALEDVHLPHRPILQDILYYMDRIFTVIFFIEMLIK 1270
L N+ ++V T+ +LS A +D LP P L DIL + I V+ ++ML K
Sbjct: 985 LTTNSNLMSSVDTLSILSKWAAQQQDSRLPINPKLPDIL--QEEINNVVAEVDMLKK 1039
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 78 QGSFPLELASTPLEDIDPFYHNQTTFVVISKGKDIFRFSATNALW----ILDPFNPI 130
Q S P STPL D P Y + + D FS+ N+L+ +L P NPI
Sbjct: 428 QLSIPSSTPSTPLSDNGPTYSTPHSSLSNFNTCDSLSFSSNNSLYGYSTLLHPRNPI 484
>SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 29.1 bits (62), Expect = 6.5
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 609 ANLGSRHSSYTSHQSRLSYTSHGDLLGGGKAQTKEARLRGRSASRNHSVTSQPHAYPLPR 668
++ S+ SS T Q S T ++ G ++ L + +N SV PH+ LP
Sbjct: 61 SSASSKVSSNTI-QELDSTTDEDEIPGSDTVDEEDPSLNAPFSEKNQSVKIPPHSPTLPV 119
Query: 669 QDSSLASRPL 678
Q++S +P+
Sbjct: 120 QNASAFVKPI 129
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 28.7 bits (61), Expect = 8.6
Identities = 16/72 (22%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 1528 IVFEIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSETFSAVLDYLNMIFIVIFSSECLLKI 1587
+VF I+ + +D++ + ++ + D+ +E +LD ++F ++ + C ++
Sbjct: 161 VVFLIMKESGYDLLACI---VSSSLVLFDNAHVTEGRLILLD-ATLLFSMVCAIYCYVRF 216
Query: 1588 FALRYHYFVEPW 1599
F LR+ F PW
Sbjct: 217 FKLRHTPFSRPW 228
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.324 0.140 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,238,528
Number of Sequences: 5004
Number of extensions: 347489
Number of successful extensions: 1194
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1156
Number of HSP's gapped (non-prelim): 30
length of query: 1969
length of database: 2,362,478
effective HSP length: 84
effective length of query: 1885
effective length of database: 1,942,142
effective search space: 3660937670
effective search space used: 3660937670
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)
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