GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001557-TA|BGIBMGA001557-PA|IPR005821|Ion transport,
IPR010526|Sodium ion transport-associated, IPR001696|Na+ channel,
IPR002048|Calcium-binding EF-hand
         (1969 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    27   2.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   3.5  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   4.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   8.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    25   8.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   8.1  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
            ORF for hypotheticalprotein. ).
          Length = 998

 Score = 26.6 bits (56), Expect = 2.0
 Identities = 16/68 (23%), Positives = 30/68 (44%)

Query: 1358 WLIFAIMGVQLFAGKYFKCVDMNHTTLSHEIIPDKNACTLENYTWENSPMNFDHVGKAYL 1417
            WL  A+  + +F+   F  +DM +  +  E IP  N+  +   T    P  + ++G   L
Sbjct: 590  WLRRALASLMVFSLGLFLLLDMFNCVVVEETIPSLNSTNVTLSTKCPYPSYYSYIGVLTL 649

Query: 1418 CLFQVATF 1425
                + T+
Sbjct: 650  VATSMPTY 657


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 3.5
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 481 QERGNQDDNTRERMSLRSDPFQDSVSTQPAHKP-----TATDTHDSARRPRKVSMASLSL 535
           Q++  Q    +++   +S      V   PA  P      AT +  ++ RP   + A+L L
Sbjct: 795 QQQQQQQQQQQQQQQQQSSSDYLMVGNSPASSPRYLSAAATSSTSTSPRPASSTAATLVL 854

Query: 536 PGSPFNL 542
            G P N+
Sbjct: 855 SGCPSNM 861


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
            protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 4.6
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 12/102 (11%)

Query: 1261 VIFFIEMLIKWLALGFQKYFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRA 1320
            ++F I  L   L++ +Q+Y    W W   I  + + ++  ++      I AF   R L  
Sbjct: 80   LLFLILGLPFELSVFWQQY---PWQWGLGICKLRAYVSETSSYVSVLTIVAFSIERYLAI 136

Query: 1321 LRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFA 1362
              PLR            + L +AI SIF   L+ LIF + FA
Sbjct: 137  YHPLRHYR---------SGLKRAIRSIFGAWLIALIFAMPFA 169


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
            monooxygenase protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 8.1
 Identities = 10/30 (33%), Positives = 19/30 (63%)

Query: 1032 DAVLYKDKKLKDQVEVAIGDGMEFTIPGDN 1061
            + VL  DK++K+QV+  + +G + T  G +
Sbjct: 329  NGVLLTDKEVKEQVDTIMFEGHDTTASGSS 358


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
            protein.
          Length = 486

 Score = 24.6 bits (51), Expect = 8.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 1747 CGSATIGITYLLSYLVISFLI 1767
            C S  +G T+ + Y++I FL+
Sbjct: 145  CTSGIVGRTHTVGYIIIGFLL 165


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.6 bits (51), Expect = 8.1
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 492 ERMSLRSDPFQD-SVSTQPAHKPTATDTHDSARRPRKVSMASLSLPGSP 539
           ER + R D   D + ST   H+P        +  PR  S  S S   SP
Sbjct: 481 ERQNGRKDSGYDGAASTAVIHEPVVETNSSPSPNPRIASAPSSSTSSSP 529


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,472
Number of Sequences: 429
Number of extensions: 21030
Number of successful extensions: 96
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 90
Number of HSP's gapped (non-prelim): 8
length of query: 1969
length of database: 140,377
effective HSP length: 68
effective length of query: 1901
effective length of database: 111,205
effective search space: 211400705
effective search space used: 211400705
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 51 (24.6 bits)