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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001556-TA|BGIBMGA001556-PA|IPR005919|Higher eukaryotic
phosphomevalonate kinase
         (186 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119197-1|AAM51057.1|  189|Drosophila melanogaster SD12705p pro...   150   1e-36
AE014134-3143|AAF53833.1|  189|Drosophila melanogaster CG10268-P...   150   1e-36
BT023811-1|AAZ66318.1|  971|Drosophila melanogaster LP23835p pro...    30   2.2  
AY119272-1|AAM51132.1|  670|Drosophila melanogaster SD25109p pro...    30   2.2  
AY118452-1|AAM49821.1|  318|Drosophila melanogaster AT09813p pro...    30   2.2  
AE014296-2502|AAF49643.2|  318|Drosophila melanogaster CG7804-PA...    30   2.2  
AE013599-3891|AAF47220.2|  947|Drosophila melanogaster CG30169-P...    30   2.2  
M25545-4|AAA28621.1|  361|Drosophila melanogaster protein ( D.me...    28   8.9  
M25545-3|AAA28624.1|  365|Drosophila melanogaster protein ( D.me...    28   8.9  
M25545-2|AAA28623.1|  360|Drosophila melanogaster protein ( D.me...    28   8.9  
M25545-1|AAA28622.1|  364|Drosophila melanogaster protein ( D.me...    28   8.9  
M15766-1|AAA70426.1|  365|Drosophila melanogaster unknown protei...    28   8.9  
AY061448-1|AAL28996.1|  361|Drosophila melanogaster LD38464p pro...    28   8.9  
AE014298-679|AAF45984.2|  408|Drosophila melanogaster CG2871-PA ...    28   8.9  
AE014297-4248|AAN14144.1|  361|Drosophila melanogaster CG9983-PF...    28   8.9  
AE014297-4247|AAN14143.1|  361|Drosophila melanogaster CG9983-PD...    28   8.9  
AE014297-4246|AAN14142.1|  365|Drosophila melanogaster CG9983-PC...    28   8.9  
AE014297-4245|AAF56801.1|  365|Drosophila melanogaster CG9983-PB...    28   8.9  
AE014297-4244|AAN14141.1|  360|Drosophila melanogaster CG9983-PE...    28   8.9  
AE014297-4243|AAF56800.2|  364|Drosophila melanogaster CG9983-PA...    28   8.9  

>AY119197-1|AAM51057.1|  189|Drosophila melanogaster SD12705p
           protein.
          Length = 189

 Score =  150 bits (364), Expect = 1e-36
 Identities = 70/150 (46%), Positives = 99/150 (66%), Gaps = 4/150 (2%)

Query: 6   ILLFSGKRKSGKDFLTDHLRHILADKCEIIKISQPIKTHWAXXXXXXXXXXXSEGEYKEQ 65
           I+L SGKRK GKD++++ L+  L  +  I++IS+PIK+ WA            +G YKE+
Sbjct: 4   IVLISGKRKCGKDYISERLQRRLGSRSCIVRISEPIKSEWAHKLQLDLDALLGDGPYKEK 63

Query: 66  YRLEMIKWSEEMRNKDYGCFCKAACENAAIK---PVWIVSDIRRKTDIRWFKETYG-DII 121
           YR +MI WS+E+R +DYG FC+ A E A  +   P  +VSD+RRK DIRWF+ETYG + +
Sbjct: 64  YRRDMIVWSDEVRAQDYGYFCRVAMEEALSRQQTPYILVSDVRRKNDIRWFRETYGPERV 123

Query: 122 RTVRITADDRTRKERGFQFQVGVDDATSEC 151
            T+R+T+   TR  RG+ F  G+DD  SEC
Sbjct: 124 ITLRLTSRPETRSARGWTFTAGIDDVPSEC 153


>AE014134-3143|AAF53833.1|  189|Drosophila melanogaster CG10268-PA
           protein.
          Length = 189

 Score =  150 bits (364), Expect = 1e-36
 Identities = 70/150 (46%), Positives = 99/150 (66%), Gaps = 4/150 (2%)

Query: 6   ILLFSGKRKSGKDFLTDHLRHILADKCEIIKISQPIKTHWAXXXXXXXXXXXSEGEYKEQ 65
           I+L SGKRK GKD++++ L+  L  +  I++IS+PIK+ WA            +G YKE+
Sbjct: 4   IVLISGKRKCGKDYISERLQRRLGSRSCIVRISEPIKSEWARKLQLDLDALLGDGPYKEK 63

Query: 66  YRLEMIKWSEEMRNKDYGCFCKAACENAAIK---PVWIVSDIRRKTDIRWFKETYG-DII 121
           YR +MI WS+E+R +DYG FC+ A E A  +   P  +VSD+RRK DIRWF+ETYG + +
Sbjct: 64  YRRDMIVWSDEVRAQDYGYFCRVAMEEALSRQQTPYILVSDVRRKNDIRWFRETYGPERV 123

Query: 122 RTVRITADDRTRKERGFQFQVGVDDATSEC 151
            T+R+T+   TR  RG+ F  G+DD  SEC
Sbjct: 124 ITLRLTSRPETRSARGWTFTAGIDDVPSEC 153


>BT023811-1|AAZ66318.1|  971|Drosophila melanogaster LP23835p
           protein.
          Length = 971

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 74  SEEMRNKDYGCFCKAACENAAIKPVWI-VSDIRRKTDIRWFKETY 117
           SEE RN D     +AA E++A KP +  V  ++  +DI  FK  +
Sbjct: 794 SEESRNIDAKFVDEAAAEDSANKPTFCNVQSLKNTSDIEHFKHDF 838


>AY119272-1|AAM51132.1|  670|Drosophila melanogaster SD25109p
           protein.
          Length = 670

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 74  SEEMRNKDYGCFCKAACENAAIKPVWI-VSDIRRKTDIRWFKETY 117
           SEE RN D     +AA E++A KP +  V  ++  +DI  FK  +
Sbjct: 493 SEESRNIDAKFVDEAAAEDSANKPTFCNVQSLKNTSDIEHFKHDF 537


>AY118452-1|AAM49821.1|  318|Drosophila melanogaster AT09813p
           protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 109 DIRWFKETYGDIIRTVRITADDRTRKERGFQF 140
           D+R + ETYGD+++   I  D R+   +GF F
Sbjct: 122 DLREYFETYGDVVK-AEIKKDTRSGHSKGFGF 152


>AE014296-2502|AAF49643.2|  318|Drosophila melanogaster CG7804-PA
           protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 109 DIRWFKETYGDIIRTVRITADDRTRKERGFQF 140
           D+R + ETYGD+++   I  D R+   +GF F
Sbjct: 122 DLREYFETYGDVVK-AEIKKDTRSGHSKGFGF 152


>AE013599-3891|AAF47220.2|  947|Drosophila melanogaster CG30169-PA
           protein.
          Length = 947

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 74  SEEMRNKDYGCFCKAACENAAIKPVWI-VSDIRRKTDIRWFKETY 117
           SEE RN D     +AA E++A KP +  V  ++  +DI  FK  +
Sbjct: 770 SEESRNIDAKFVDEAAAEDSANKPTFCNVQSLKNTSDIEHFKHDF 814


>M25545-4|AAA28621.1|  361|Drosophila melanogaster protein (
           D.melanogaster Hrb98DElocus encoding heterogeneous
           nuclear ribonucleoproteinisoforms, exon 5. ).
          Length = 361

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 115 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 168


>M25545-3|AAA28624.1|  365|Drosophila melanogaster protein (
           D.melanogaster Hrb98DElocus encoding heterogeneous
           nuclear ribonucleoproteinisoforms, exon 5. ).
          Length = 365

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 119 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 172


>M25545-2|AAA28623.1|  360|Drosophila melanogaster protein (
           D.melanogaster Hrb98DElocus encoding heterogeneous
           nuclear ribonucleoproteinisoforms, exon 5. ).
          Length = 360

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 114 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 167


>M25545-1|AAA28622.1|  364|Drosophila melanogaster protein (
           D.melanogaster Hrb98DElocus encoding heterogeneous
           nuclear ribonucleoproteinisoforms, exon 5. ).
          Length = 364

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 118 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 171


>M15766-1|AAA70426.1|  365|Drosophila melanogaster unknown protein
           protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 119 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 172


>AY061448-1|AAL28996.1|  361|Drosophila melanogaster LD38464p
           protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 115 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 168


>AE014298-679|AAF45984.2|  408|Drosophila melanogaster CG2871-PA
           protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)

Query: 74  SEEMRNKDYGCFCKAACENAAIKPV-WIVSDIRRKTDIRWFKETYGDIIRTVRITADDRT 132
           S+    ++ G   +  C  ++ +   W   D RR+     F E   D +   R T+  ++
Sbjct: 309 SKRQSREEAGEELEIGCNESSSREFEWYDEDARRRGS---FGE---DDLGCPRATSKRQS 362

Query: 133 RKERGFQFQVGVDDATSEC 151
           R+E G + Q+G D++ S C
Sbjct: 363 REEAGEELQIGCDESNSVC 381


>AE014297-4248|AAN14144.1|  361|Drosophila melanogaster CG9983-PF,
           isoform F protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 115 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 168


>AE014297-4247|AAN14143.1|  361|Drosophila melanogaster CG9983-PD,
           isoform D protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 115 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 168


>AE014297-4246|AAN14142.1|  365|Drosophila melanogaster CG9983-PC,
           isoform C protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 119 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 172


>AE014297-4245|AAF56801.1|  365|Drosophila melanogaster CG9983-PB,
           isoform B protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 119 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 172


>AE014297-4244|AAN14141.1|  360|Drosophila melanogaster CG9983-PE,
           isoform E protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 114 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 167


>AE014297-4243|AAF56800.2|  364|Drosophila melanogaster CG9983-PA,
           isoform A protein.
          Length = 364

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 93  AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
           A +K +++  + D   +  IR + + +G+I+  + I  D  T K+RGF F V  DD
Sbjct: 118 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 171


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.136    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,709,054
Number of Sequences: 52641
Number of extensions: 263139
Number of successful extensions: 413
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 406
Number of HSP's gapped (non-prelim): 33
length of query: 186
length of database: 24,830,863
effective HSP length: 81
effective length of query: 105
effective length of database: 20,566,942
effective search space: 2159528910
effective search space used: 2159528910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)

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