Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001556-TA|BGIBMGA001556-PA|IPR005919|Higher eukaryotic
phosphomevalonate kinase
(186 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119197-1|AAM51057.1| 189|Drosophila melanogaster SD12705p pro... 150 1e-36
AE014134-3143|AAF53833.1| 189|Drosophila melanogaster CG10268-P... 150 1e-36
BT023811-1|AAZ66318.1| 971|Drosophila melanogaster LP23835p pro... 30 2.2
AY119272-1|AAM51132.1| 670|Drosophila melanogaster SD25109p pro... 30 2.2
AY118452-1|AAM49821.1| 318|Drosophila melanogaster AT09813p pro... 30 2.2
AE014296-2502|AAF49643.2| 318|Drosophila melanogaster CG7804-PA... 30 2.2
AE013599-3891|AAF47220.2| 947|Drosophila melanogaster CG30169-P... 30 2.2
M25545-4|AAA28621.1| 361|Drosophila melanogaster protein ( D.me... 28 8.9
M25545-3|AAA28624.1| 365|Drosophila melanogaster protein ( D.me... 28 8.9
M25545-2|AAA28623.1| 360|Drosophila melanogaster protein ( D.me... 28 8.9
M25545-1|AAA28622.1| 364|Drosophila melanogaster protein ( D.me... 28 8.9
M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protei... 28 8.9
AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p pro... 28 8.9
AE014298-679|AAF45984.2| 408|Drosophila melanogaster CG2871-PA ... 28 8.9
AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF... 28 8.9
AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD... 28 8.9
AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC... 28 8.9
AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB... 28 8.9
AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE... 28 8.9
AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA... 28 8.9
>AY119197-1|AAM51057.1| 189|Drosophila melanogaster SD12705p
protein.
Length = 189
Score = 150 bits (364), Expect = 1e-36
Identities = 70/150 (46%), Positives = 99/150 (66%), Gaps = 4/150 (2%)
Query: 6 ILLFSGKRKSGKDFLTDHLRHILADKCEIIKISQPIKTHWAXXXXXXXXXXXSEGEYKEQ 65
I+L SGKRK GKD++++ L+ L + I++IS+PIK+ WA +G YKE+
Sbjct: 4 IVLISGKRKCGKDYISERLQRRLGSRSCIVRISEPIKSEWAHKLQLDLDALLGDGPYKEK 63
Query: 66 YRLEMIKWSEEMRNKDYGCFCKAACENAAIK---PVWIVSDIRRKTDIRWFKETYG-DII 121
YR +MI WS+E+R +DYG FC+ A E A + P +VSD+RRK DIRWF+ETYG + +
Sbjct: 64 YRRDMIVWSDEVRAQDYGYFCRVAMEEALSRQQTPYILVSDVRRKNDIRWFRETYGPERV 123
Query: 122 RTVRITADDRTRKERGFQFQVGVDDATSEC 151
T+R+T+ TR RG+ F G+DD SEC
Sbjct: 124 ITLRLTSRPETRSARGWTFTAGIDDVPSEC 153
>AE014134-3143|AAF53833.1| 189|Drosophila melanogaster CG10268-PA
protein.
Length = 189
Score = 150 bits (364), Expect = 1e-36
Identities = 70/150 (46%), Positives = 99/150 (66%), Gaps = 4/150 (2%)
Query: 6 ILLFSGKRKSGKDFLTDHLRHILADKCEIIKISQPIKTHWAXXXXXXXXXXXSEGEYKEQ 65
I+L SGKRK GKD++++ L+ L + I++IS+PIK+ WA +G YKE+
Sbjct: 4 IVLISGKRKCGKDYISERLQRRLGSRSCIVRISEPIKSEWARKLQLDLDALLGDGPYKEK 63
Query: 66 YRLEMIKWSEEMRNKDYGCFCKAACENAAIK---PVWIVSDIRRKTDIRWFKETYG-DII 121
YR +MI WS+E+R +DYG FC+ A E A + P +VSD+RRK DIRWF+ETYG + +
Sbjct: 64 YRRDMIVWSDEVRAQDYGYFCRVAMEEALSRQQTPYILVSDVRRKNDIRWFRETYGPERV 123
Query: 122 RTVRITADDRTRKERGFQFQVGVDDATSEC 151
T+R+T+ TR RG+ F G+DD SEC
Sbjct: 124 ITLRLTSRPETRSARGWTFTAGIDDVPSEC 153
>BT023811-1|AAZ66318.1| 971|Drosophila melanogaster LP23835p
protein.
Length = 971
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 74 SEEMRNKDYGCFCKAACENAAIKPVWI-VSDIRRKTDIRWFKETY 117
SEE RN D +AA E++A KP + V ++ +DI FK +
Sbjct: 794 SEESRNIDAKFVDEAAAEDSANKPTFCNVQSLKNTSDIEHFKHDF 838
>AY119272-1|AAM51132.1| 670|Drosophila melanogaster SD25109p
protein.
Length = 670
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 74 SEEMRNKDYGCFCKAACENAAIKPVWI-VSDIRRKTDIRWFKETY 117
SEE RN D +AA E++A KP + V ++ +DI FK +
Sbjct: 493 SEESRNIDAKFVDEAAAEDSANKPTFCNVQSLKNTSDIEHFKHDF 537
>AY118452-1|AAM49821.1| 318|Drosophila melanogaster AT09813p
protein.
Length = 318
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 109 DIRWFKETYGDIIRTVRITADDRTRKERGFQF 140
D+R + ETYGD+++ I D R+ +GF F
Sbjct: 122 DLREYFETYGDVVK-AEIKKDTRSGHSKGFGF 152
>AE014296-2502|AAF49643.2| 318|Drosophila melanogaster CG7804-PA
protein.
Length = 318
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 109 DIRWFKETYGDIIRTVRITADDRTRKERGFQF 140
D+R + ETYGD+++ I D R+ +GF F
Sbjct: 122 DLREYFETYGDVVK-AEIKKDTRSGHSKGFGF 152
>AE013599-3891|AAF47220.2| 947|Drosophila melanogaster CG30169-PA
protein.
Length = 947
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 74 SEEMRNKDYGCFCKAACENAAIKPVWI-VSDIRRKTDIRWFKETY 117
SEE RN D +AA E++A KP + V ++ +DI FK +
Sbjct: 770 SEESRNIDAKFVDEAAAEDSANKPTFCNVQSLKNTSDIEHFKHDF 814
>M25545-4|AAA28621.1| 361|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 361
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 115 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 168
>M25545-3|AAA28624.1| 365|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 365
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 119 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 172
>M25545-2|AAA28623.1| 360|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 360
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 114 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 167
>M25545-1|AAA28622.1| 364|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 364
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 118 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 171
>M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 119 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 172
>AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p
protein.
Length = 361
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 115 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 168
>AE014298-679|AAF45984.2| 408|Drosophila melanogaster CG2871-PA
protein.
Length = 408
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 74 SEEMRNKDYGCFCKAACENAAIKPV-WIVSDIRRKTDIRWFKETYGDIIRTVRITADDRT 132
S+ ++ G + C ++ + W D RR+ F E D + R T+ ++
Sbjct: 309 SKRQSREEAGEELEIGCNESSSREFEWYDEDARRRGS---FGE---DDLGCPRATSKRQS 362
Query: 133 RKERGFQFQVGVDDATSEC 151
R+E G + Q+G D++ S C
Sbjct: 363 REEAGEELQIGCDESNSVC 381
>AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF,
isoform F protein.
Length = 361
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 115 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 168
>AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD,
isoform D protein.
Length = 361
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 115 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 168
>AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC,
isoform C protein.
Length = 365
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 119 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 172
>AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB,
isoform B protein.
Length = 365
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 119 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 172
>AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE,
isoform E protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 114 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 167
>AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA,
isoform A protein.
Length = 364
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 93 AAIKPVWI--VSDIRRKTDIRWFKETYGDIIRTVRITADDRTRKERGFQFQVGVDD 146
A +K +++ + D + IR + + +G+I+ + I D T K+RGF F V DD
Sbjct: 118 ATVKKLFVGALKDDHDEQSIRDYFQHFGNIV-DINIVIDKETGKKRGFAF-VEFDD 171
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.320 0.136 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,709,054
Number of Sequences: 52641
Number of extensions: 263139
Number of successful extensions: 413
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 406
Number of HSP's gapped (non-prelim): 33
length of query: 186
length of database: 24,830,863
effective HSP length: 81
effective length of query: 105
effective length of database: 20,566,942
effective search space: 2159528910
effective search space used: 2159528910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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