GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001555-TA|BGIBMGA001555-PA|undefined
         (81 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0YX31 Cluster: Putative uncharacterized protein; n=2; ...    33   1.4  
UniRef50_A7QKS4 Cluster: Chromosome undetermined scaffold_114, w...    30   7.7  
UniRef50_Q0U905 Cluster: Putative uncharacterized protein; n=1; ...    30   7.7  

>UniRef50_A0YX31 Cluster: Putative uncharacterized protein; n=2;
           Cyanobacteria|Rep: Putative uncharacterized protein -
           Lyngbya sp. PCC 8106
          Length = 819

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 28  SPPAHHHSSTIADIRNTARTTLGRG--LTNQGLLYKRKFKCYDPEGFIKNYFEG 79
           +P    H+  +A +   A  TLG    L   G LY    K +DP GFI+N   G
Sbjct: 600 APGTFQHTMFVATLAEAAAQTLGCNVELVRTGTLYHDIGKMHDPLGFIENQMGG 653


>UniRef50_A7QKS4 Cluster: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_114, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 675

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/21 (61%), Positives = 15/21 (71%)

Query: 11  AHLCGAPLRSVEHNKGASPPA 31
           A LCG+PLRS + N G SP A
Sbjct: 284 AGLCGSPLRSCKSNSGLSPGA 304


>UniRef50_Q0U905 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 858

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 20  SVEHNKGASPPAHHHSSTIADIRNTARTTLGRGLTNQGLLYKRKFKCYDPEG 71
           ++E + GA PP++H +     +  +  TT+  G   + ++Y +     DP G
Sbjct: 125 TIELSSGAVPPSNHVNGDQRHVVPSRATTVNSGPDEEAVIYSQSRMLQDPTG 176


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.320    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,411,796
Number of Sequences: 1657284
Number of extensions: 2820262
Number of successful extensions: 6563
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6561
Number of HSP's gapped (non-prelim): 3
length of query: 81
length of database: 575,637,011
effective HSP length: 60
effective length of query: 21
effective length of database: 476,199,971
effective search space: 10000199391
effective search space used: 10000199391
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)