GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001555-TA|BGIBMGA001555-PA|undefined
         (81 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   3.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    19   6.7  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    19   6.7  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    19   6.7  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    19   6.7  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    19   6.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    19   8.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    19   8.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    19   8.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/32 (21%), Positives = 18/32 (56%)

Query: 18   LRSVEHNKGASPPAHHHSSTIADIRNTARTTL 49
            + +VE  +  +PP+ H S+ +   +++   +L
Sbjct: 1785 VEAVEEEREEAPPSVHSSTVVPPPQHSTTQSL 1816


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
          protein.
          Length = 126

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query: 16 APLRSVEHNKGASPP 30
          +PL +  HN   SPP
Sbjct: 16 SPLLTPPHNPAYSPP 30


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 66  CYDPEG 71
           CYDP+G
Sbjct: 99  CYDPDG 104


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/28 (28%), Positives = 11/28 (39%)

Query: 7   RETEAHLCGAPLRSVEHNKGASPPAHHH 34
           +E   H CG P       + A   A H+
Sbjct: 173 QENVIHFCGDPNNVTIFGESAGAAAAHY 200


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/28 (28%), Positives = 11/28 (39%)

Query: 7   RETEAHLCGAPLRSVEHNKGASPPAHHH 34
           +E   H CG P       + A   A H+
Sbjct: 173 QENVIHFCGDPNNVTIFGESAGAAAAHY 200


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/28 (28%), Positives = 11/28 (39%)

Query: 7   RETEAHLCGAPLRSVEHNKGASPPAHHH 34
           +E   H CG P       + A   A H+
Sbjct: 172 QENVIHFCGDPNNVTIFGESAGAAAAHY 199


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/14 (50%), Positives = 7/14 (50%)

Query: 63  KFKCYDPEGFIKNY 76
           K  CYD     KNY
Sbjct: 213 KLNCYDLRRVRKNY 226


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/28 (28%), Positives = 11/28 (39%)

Query: 7   RETEAHLCGAPLRSVEHNKGASPPAHHH 34
           +E   H CG P       + A   A H+
Sbjct: 173 QENIIHFCGDPNNVTIFGESAGAAAAHY 200


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 8/28 (28%), Positives = 11/28 (39%)

Query: 7   RETEAHLCGAPLRSVEHNKGASPPAHHH 34
           +E   H CG P       + A   A H+
Sbjct: 173 QENIIHFCGDPNNVTIFGESAGAAAAHY 200


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,740
Number of Sequences: 317
Number of extensions: 642
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 81
length of database: 114,650
effective HSP length: 46
effective length of query: 35
effective length of database: 100,068
effective search space:  3502380
effective search space used:  3502380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.5 bits)
S2: 36 (18.6 bits)