GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001555-TA|BGIBMGA001555-PA|undefined
         (81 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  28   5.4  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                28   5.4  
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    28   5.4  

>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2     HFQLQRETEAHLCGAPLRSVEHNKGASPPAHHHSSTIADIRNTARTTL 49
             +F++  E E  + G P+ +V+  K A PP+     T+ D+  T+ + +
Sbjct: 17689 YFRVMAENEFGV-GVPVETVDAVKAAEPPSPPGKVTLTDVSQTSASLM 17735


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2     HFQLQRETEAHLCGAPLRSVEHNKGASPPAHHHSSTIADIRNTARTTL 49
             +F++  E E  + G P+ +V+  K A PP+     T+ D+  T+ + +
Sbjct: 25113 YFRVMAENEFGV-GVPVETVDAVKAAEPPSPPGKVTLTDVSQTSASLM 25159


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2     HFQLQRETEAHLCGAPLRSVEHNKGASPPAHHHSSTIADIRNTARTTL 49
             +F++  E E  + G P+ +V+  K A PP+     T+ D+  T+ + +
Sbjct: 17689 YFRVMAENEFGV-GVPVETVDAVKAAEPPSPPGKVTLTDVSQTSASLM 17735


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.320    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,326,115
Number of Sequences: 224733
Number of extensions: 398009
Number of successful extensions: 674
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 674
Number of HSP's gapped (non-prelim): 3
length of query: 81
length of database: 73,234,838
effective HSP length: 59
effective length of query: 22
effective length of database: 59,975,591
effective search space: 1319463002
effective search space used: 1319463002
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)