GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001555-TA|BGIBMGA001555-PA|undefined
         (81 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119538-1|AAM50192.1|  769|Drosophila melanogaster GH22104p pro...    28   1.8  
AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p pro...    28   1.8  
AE014298-778|AAF46065.2| 1059|Drosophila melanogaster CG4096-PA ...    28   1.8  
AE014297-1754|AAF54984.1| 1481|Drosophila melanogaster CG14365-P...    28   1.8  
AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA...    28   1.8  
AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA...    28   1.8  
AY122238-1|AAM52750.1|  896|Drosophila melanogaster SD01014p pro...    26   5.4  
AE013599-3903|AAF47230.1|  880|Drosophila melanogaster CG12252-P...    26   5.4  
AY094890-1|AAM11243.1|  517|Drosophila melanogaster RE59303p pro...    26   7.2  
AY060872-1|AAL28420.1|  390|Drosophila melanogaster GM03781p pro...    26   7.2  
AY051738-1|AAK93162.1|  410|Drosophila melanogaster LD26477p pro...    26   7.2  
AE014297-4502|AAO41612.1|  410|Drosophila melanogaster CG11504-P...    26   7.2  
AE014297-4501|AAF56985.1|  410|Drosophila melanogaster CG11504-P...    26   7.2  
AE014297-4500|AAN14204.1|  410|Drosophila melanogaster CG11504-P...    26   7.2  
AE014134-1581|AAF52726.1|  517|Drosophila melanogaster CG31886-P...    26   7.2  

>AY119538-1|AAM50192.1|  769|Drosophila melanogaster GH22104p
           protein.
          Length = 769

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 24  NKGASPPAHHHSSTIADIRNT--ARTTLGRGLTNQGLLYKRKFKC 66
           NKG+    HHH   I   R    A   +  GL N G + K K  C
Sbjct: 396 NKGSEKDPHHHDVAILITRKNICANNCMTLGLANVGGMCKPKQSC 440


>AY118590-1|AAM49959.1| 1858|Drosophila melanogaster LD45234p protein.
          Length = 1858

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 2    HFQLQRETEAHLCGAPLRSVEHNKGASPPAHHHSSTIADIRNTARTTLGRGLTNQGLLYK 61
            H Q+Q++  AH  G P      + G S P +  S T+ D+  ++ +   R     G  YK
Sbjct: 1702 HQQIQQQPSAHTTGPP-SPTSMSSGCSSPGYSPSRTL-DLSGSSSSFSDRKAMAAGYTYK 1759


>AE014298-778|AAF46065.2| 1059|Drosophila melanogaster CG4096-PA
           protein.
          Length = 1059

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 24  NKGASPPAHHHSSTIADIRNT--ARTTLGRGLTNQGLLYKRKFKC 66
           NKG+    HHH   I   R    A   +  GL N G + K K  C
Sbjct: 413 NKGSEKDPHHHDVAILITRKNICANNCMTLGLANVGGMCKPKQSC 457


>AE014297-1754|AAF54984.1| 1481|Drosophila melanogaster CG14365-PA
           protein.
          Length = 1481

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 27  ASPPAHHHSSTIADIRNTARTTLGRGLTNQGL-LYKRK 63
           A+PP  HH+ T++D   + + T     T+  L LY+R+
Sbjct: 952 ATPPQQHHARTLSDSNYSCQLTDTSSRTSSDLDLYRRR 989


>AE014296-469|AAF47657.3| 2145|Drosophila melanogaster CG16757-PA
            protein.
          Length = 2145

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 2    HFQLQRETEAHLCGAPLRSVEHNKGASPPAHHHSSTIADIRNTARTTLGRGLTNQGLLYK 61
            H Q+Q++  AH  G P      + G S P +  S T+ D+  ++ +   R     G  YK
Sbjct: 1989 HQQIQQQPSAHTTGPP-SPTSMSSGCSSPGYSPSRTL-DLSGSSSSFSDRKAMAAGYTYK 2046


>AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA
            protein.
          Length = 1857

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)

Query: 8    ETEAHLCGAPLRSVEHNKGASPPAHHHSSTIADIRNTART 47
            +T AH    P  S   +   +PP HHH  T   + N A T
Sbjct: 1625 KTTAH---KPSASASASTTTAPPTHHHELTYVYVTNLANT 1661


>AY122238-1|AAM52750.1|  896|Drosophila melanogaster SD01014p
           protein.
          Length = 896

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)

Query: 17  PLRSVEHNKGASPPAHHHS 35
           PL     NKG  PPAH HS
Sbjct: 694 PLDRKVRNKGRQPPAHCHS 712


>AE013599-3903|AAF47230.1|  880|Drosophila melanogaster CG12252-PA
           protein.
          Length = 880

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)

Query: 17  PLRSVEHNKGASPPAHHHS 35
           PL     NKG  PPAH HS
Sbjct: 678 PLDRKVRNKGRQPPAHCHS 696


>AY094890-1|AAM11243.1|  517|Drosophila melanogaster RE59303p
           protein.
          Length = 517

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query: 23  HNKGASPPAHHHSST 37
           H+  ++ PAHHH+ST
Sbjct: 248 HDHSSNSPAHHHNST 262


>AY060872-1|AAL28420.1|  390|Drosophila melanogaster GM03781p
           protein.
          Length = 390

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query: 23  HNKGASPPAHHHSST 37
           H+  ++ PAHHH+ST
Sbjct: 121 HDHSSNSPAHHHNST 135


>AY051738-1|AAK93162.1|  410|Drosophila melanogaster LD26477p
           protein.
          Length = 410

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/22 (40%), Positives = 17/22 (77%)

Query: 20  SVEHNKGASPPAHHHSSTIADI 41
           + +HN  +S PA+H+S+T A++
Sbjct: 122 TADHNSDSSTPANHNSNTNANM 143


>AE014297-4502|AAO41612.1|  410|Drosophila melanogaster CG11504-PC,
           isoform C protein.
          Length = 410

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/22 (40%), Positives = 17/22 (77%)

Query: 20  SVEHNKGASPPAHHHSSTIADI 41
           + +HN  +S PA+H+S+T A++
Sbjct: 122 TADHNSDSSTPANHNSNTNANM 143


>AE014297-4501|AAF56985.1|  410|Drosophila melanogaster CG11504-PB,
           isoform B protein.
          Length = 410

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/22 (40%), Positives = 17/22 (77%)

Query: 20  SVEHNKGASPPAHHHSSTIADI 41
           + +HN  +S PA+H+S+T A++
Sbjct: 122 TADHNSDSSTPANHNSNTNANM 143


>AE014297-4500|AAN14204.1|  410|Drosophila melanogaster CG11504-PA,
           isoform A protein.
          Length = 410

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/22 (40%), Positives = 17/22 (77%)

Query: 20  SVEHNKGASPPAHHHSSTIADI 41
           + +HN  +S PA+H+S+T A++
Sbjct: 122 TADHNSDSSTPANHNSNTNANM 143


>AE014134-1581|AAF52726.1|  517|Drosophila melanogaster CG31886-PA
           protein.
          Length = 517

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query: 23  HNKGASPPAHHHSST 37
           H+  ++ PAHHH+ST
Sbjct: 248 HDHSSNSPAHHHNST 262


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,202,679
Number of Sequences: 52641
Number of extensions: 140630
Number of successful extensions: 387
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 377
Number of HSP's gapped (non-prelim): 15
length of query: 81
length of database: 24,830,863
effective HSP length: 61
effective length of query: 20
effective length of database: 21,619,762
effective search space: 432395240
effective search space used: 432395240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)