Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001553-TA|BGIBMGA001553-PA|IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter, IPR013200|HAD superfamily
hydrolase-like, type 3
(564 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.) 228 8e-60
SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 3e-41
SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85) 125 8e-29
SB_51449| Best HMM Match : tRNA-synt_2c (HMM E-Value=1.4) 69 1e-11
SB_58843| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 5e-07
SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 4e-06
SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 44 4e-04
SB_34603| Best HMM Match : DUF1211 (HMM E-Value=3.3) 43 8e-04
SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.003
SB_56051| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.038
SB_48905| Best HMM Match : Acid_phosphat_B (HMM E-Value=5.8) 37 0.038
SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.20
SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.26
SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24) 32 1.4
SB_43063| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_10655| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.3
SB_12715| Best HMM Match : Adeno_E1A (HMM E-Value=1.3) 31 3.3
SB_563| Best HMM Match : Ank (HMM E-Value=0) 30 4.3
SB_50426| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 29 9.9
SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26) 29 9.9
SB_33520| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-09) 29 9.9
SB_9875| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
>SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1138
Score = 228 bits (558), Expect = 8e-60
Identities = 111/290 (38%), Positives = 173/290 (59%), Gaps = 3/290 (1%)
Query: 92 NAPAVSVVTFRW-EHNSLAHSNEYVSGG-AHTSEPHEHANDDSNGFAIVVNGHSLVHCLH 149
N S + W H + + +SG ++T+ + ++++G +L++ L
Sbjct: 821 NKDECSCQIYSWLNHLKIEPTVSSISGSTSYTTVSFDSRITADQPLGLIIDGPTLIYALE 880
Query: 150 PKLEEKFSEVVLHCRSVICCRVTPLQKAMVVELIKKSRKAVTLAIGDGANDVSMIKAAHI 209
L EKF + C+ V+CCR TP+QKA VVEL++ K +TLAIGDGANDVSMI+ A +
Sbjct: 881 KPLNEKFLHLASRCQVVLCCRATPMQKASVVELVRDGLKVMTLAIGDGANDVSMIQMADV 940
Query: 210 GVGISGQEGMQAVLASDYSIAQFRFLQRLLLVHGRWSYYRMCKFLRYFFYKNFAFTVCHF 269
G+GI+GQEGMQAV+ASD++IA+FRFL +LLLVHG W Y R+ K + YFFYKN F + F
Sbjct: 941 GIGITGQEGMQAVMASDFAIARFRFLAQLLLVHGHWCYDRITKMILYFFYKNAMFVLVLF 1000
Query: 270 WFAFFCGFSAQTVFDEMFISVYNLFYTSLPVLALGVFEQDVSDATSLQFPKLYAPGHTSQ 329
W+ + GFS D++ + +NL +T+ P + G+ ++D+ P+LY G Q
Sbjct: 1001 WYQLYNGFSGSNAIDDLSLIFFNLIFTAAPPIVCGILDKDLPATLLKDNPQLYKAGQEGQ 1060
Query: 330 LFNKTEFIKSTLHGCFTSLVLFLIPYGTYNDGLAADGRVLSDHMLLGSVV 379
L+++ F + L + S++LF + + +G+ AD R++ M +VV
Sbjct: 1061 LYSRKLFWATILDALYQSVILFFACFLLF-EGMPADDRMVGITMHQAAVV 1109
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 3 GIKIWVLTGDKQETAINIGYSCQLLTDDMAEVFVVDGASYDDVNKQLAKCRDSIRVVNT 61
G+K+WVLTGDKQETAIN+GY+ +LL M ++ ++ + D+ + Q+ + +++ T
Sbjct: 784 GLKVWVLTGDKQETAINVGYASKLLDASMQKI-TLNAKNKDECSCQIYSWLNHLKIEPT 841
>SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 167 bits (405), Expect = 3e-41
Identities = 103/228 (45%), Positives = 138/228 (60%), Gaps = 27/228 (11%)
Query: 26 LLTDDMAEVFVVDGASYDDVNKQLAKCRDSIRVVNTFMPHGPRSSDAKRDEEPNGAVSGR 85
LLTDDM EVF+++G S D V R+SI + + + G A N +VS R
Sbjct: 625 LLTDDMTEVFMINGDSMDAV-------RESINMYKSKVQAGLDDKAAH-----NNSVSFR 672
Query: 86 GANVKLNAPAVSVVTFRWEHNSLAHSNEYVSGGAHTSEPHEHANDDSNGFAIVVNGHSLV 145
+ + V N + + +E + G + GF +V+ G SLV
Sbjct: 673 KGSRETAKSDSGVEMISLRDNHVGNGDEGKTDGGNA------------GFGLVITGKSLV 720
Query: 146 HCLHPKLEEKFSEVVLHCRSVICCRVTPLQKAMVVELIKKSRKAVTLAIGDGANDVSMIK 205
L+ +LE +F E+ C++VICCRVTPLQKA+VV+L+K ++KAVTLAIGDGANDVSMIK
Sbjct: 721 FALNKQLELEFLELACMCKAVICCRVTPLQKALVVQLVKDNKKAVTLAIGDGANDVSMIK 780
Query: 206 AAHIGVGISGQEGMQAVLASDYSIAQFRF-LQRLLLVHGRW--SYYRM 250
AAHIGVGISGQEGMQA LASDYS AQFR+ L ++ ++ W S+Y +
Sbjct: 781 AAHIGVGISGQEGMQATLASDYSFAQFRYPLHSIVTLYDAWFISFYNV 828
Score = 144 bits (350), Expect = 1e-34
Identities = 80/257 (31%), Positives = 126/257 (49%), Gaps = 11/257 (4%)
Query: 278 SAQTVFDEMFISVYNLFYTSLPVLALGVFEQDVSDATSLQFPKLYAPGHTSQLFNKTEFI 337
S T++D FIS YN+ +TS PV+ L +F+QDV+ +++PKLY PG + +FNK F
Sbjct: 813 SIVTLYDAWFISFYNVLFTSGPVVFLAIFDQDVNHENCIRYPKLYVPGQQNIMFNKRVFA 872
Query: 338 KSTLHGCFTSLVLFLIPYGTYN-DGLAADGRVLSDHMLLGSVVATILIIDNTTQIALDTT 396
S +G TSL L+ + YG + + GR S+ G+ VA L++ +I+L T
Sbjct: 873 YSLFYGSLTSLWLYFLAYGVLGFVTIDSVGRDTSNLKFFGTAVAATLVVVVNVEISLKTQ 932
Query: 397 YWTVFNHVTIWGSLVSYFVL------DYFYNYAIGGPYVGSLTVALTQPTFWFTAVLTMI 450
YWT NH WGS++ YF+ +F+N Y G P FW ++
Sbjct: 933 YWTWINHFFTWGSIIFYFIFYFIYYSQFFFNRGPQEHYFGVQFQVFGNPVFWLYLLIAAF 992
Query: 451 ILMVPVVSWRLASARARGTLAERLRLRQRWXXXXXXXXXX---XXXXXXXXXXXGYAFAH 507
+ +P + +L + + TL++ +R +Q+ YAF+H
Sbjct: 993 VTNIPSICEKLIRSEYKPTLSDAVRRKQQGRERTVLKLREFRPRLTRRRSSKRTSYAFSH 1052
Query: 508 QEGFGRLITS-GKIMRR 523
QEGFG ++ S +RR
Sbjct: 1053 QEGFGSIVMSPASFLRR 1069
>SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85)
Length = 1459
Score = 125 bits (302), Expect = 8e-29
Identities = 62/110 (56%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
Query: 135 FAIVVNGHSLVHCLHPKLEEKFSEVVLHCRSVICCRVTPLQKAMVVELIKKSR-KAVTLA 193
F ++V+G SLVH + +E F EV C +V+CCR++PLQKA VV+L+K S+ K VTLA
Sbjct: 1156 FGLIVDGMSLVHIFNGH-KELFIEVCKFCMAVLCCRMSPLQKAQVVQLVKVSKEKPVTLA 1214
Query: 194 IGDGANDVSMIKAAHIGVGISGQEGMQAVLASDYSIAQFRFLQRLLLVHG 243
IGDGAND MI+ AH+G+G+ G+EG QAV+ SDY+I++FRFL R L HG
Sbjct: 1215 IGDGANDCGMIQEAHVGIGVMGKEGRQAVMTSDYAISRFRFLAR-PLYHG 1263
Score = 65.3 bits (152), Expect = 1e-10
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 277 FSAQTVFDEMFISVYNLFYTSLPVLALGVFEQDVSDATSLQFPKLYAPGHTSQLFNKTEF 336
F A+ ++ ++ YN+F+TSLP+L G+FEQ + P LY + + +F
Sbjct: 1255 FLARPLYHGFLLTCYNIFFTSLPILIFGIFEQHIGGDILQGRPSLYQDVAKNSRLSWVQF 1314
Query: 337 IKSTLHGCFTSLVLFLIPYGTYNDGLAADGRVLSDHMLLGSVVATILIIDNTTQIALDTT 396
I L L A + G+ V + +I + ++AL T
Sbjct: 1315 IYWVASEMLPKTAASL------GSSLYAGSHLNVGIWSFGTFVFAVCVIVSNLKLALVTH 1368
Query: 397 YWTVFNHVTIWGSLVSYFVLDYFYN 421
YWT HV WGS++++F+ +N
Sbjct: 1369 YWTWLTHVVTWGSILTFFLFAIVFN 1393
>SB_51449| Best HMM Match : tRNA-synt_2c (HMM E-Value=1.4)
Length = 742
Score = 68.5 bits (160), Expect = 1e-11
Identities = 27/63 (42%), Positives = 44/63 (69%)
Query: 270 WFAFFCGFSAQTVFDEMFISVYNLFYTSLPVLALGVFEQDVSDATSLQFPKLYAPGHTSQ 329
WFA GFS Q +FD+ I +YN+ +TS+P LA+G+F++ VS + L++PKLY ++
Sbjct: 632 WFAMENGFSGQILFDKWCIGIYNVIFTSVPPLAIGLFDRTVSSESMLKYPKLYKTSQNAE 691
Query: 330 LFN 332
++N
Sbjct: 692 IYN 694
Score = 58.0 bits (134), Expect = 2e-08
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 2 AGIKIWVLTGDKQETAINIGYSCQLLTDDMAEVFVVDGASYDDVNKQL 49
A IKIWVLTGDKQETAINIGY+C+LLT +M ++ + + + D + + L
Sbjct: 523 ADIKIWVLTGDKQETAINIGYACRLLTGEM-KLLMCNDETLDGIREWL 569
Score = 38.7 bits (86), Expect = 0.012
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 175 QKAMVVELIKKSRK-AVTLAIGDGANDVSMIKA-AHIGVGISGQ 216
+K+ VV L+K K ++TLAIGDGANDV MI+ + G SGQ
Sbjct: 599 KKSQVVRLVKHHVKDSITLAIGDGANDVGMIQLWFAMENGFSGQ 642
>SB_58843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 53.2 bits (122), Expect = 5e-07
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 16 TAINIGYSCQLLTDDMAEVFVVDGASYDDVNKQLAKCRDSIR 57
TA+NIGYSCQLLTDDM EVF+++G S D V + + + ++
Sbjct: 2 TAVNIGYSCQLLTDDMTEVFMINGDSMDAVRESINMYKSKVQ 43
>SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 50.4 bits (115), Expect = 4e-06
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 133 NGFAIVVNGHSLVHCL-HPKLEEKFSEVVLHCRSVICCRVTPLQKAMVVELIKKSRKAVT 191
N + + + G + + HP+ + F ++ R + RV P QK +V+ +K SR VT
Sbjct: 411 NKYDMCITGEAFSYLTTHPEASKLFDAILPFVR--VFARVAPKQKELVITRLK-SRGYVT 467
Query: 192 LAIGDGANDVSMIKAAHIGVGI 213
L GDG NDV +K AH GV +
Sbjct: 468 LMCGDGTNDVGALKHAHCGVAL 489
>SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1003
Score = 43.6 bits (98), Expect = 4e-04
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 130 DDSNGFAIVVNGHSLVHCLHPKLEEKFSEVVLHCRSVICCRVTPLQKAMVVELIKKSRKA 189
D++ AIVV+G L +EK ++ + ++ R +P QK ++VE ++ A
Sbjct: 671 DETKAKAIVVHGSQL----KDYDQEKIDGILCNHTEIVFARTSPQQKLIIVEGCQRMG-A 725
Query: 190 VTLAIGDGANDVSMIKAAHIGV--GISGQE 217
+ GDG ND +K A IGV GI+G +
Sbjct: 726 IVAVTGDGVNDSPALKKADIGVAMGIAGSD 755
>SB_34603| Best HMM Match : DUF1211 (HMM E-Value=3.3)
Length = 143
Score = 42.7 bits (96), Expect = 8e-04
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 376 GSVVATILIIDNTTQIALDTTYWTVFNHVTIWGSLVSYFVLDYFYN 421
G+ V + +I + ++AL T YWT HV WGS++++F+ +N
Sbjct: 32 GTFVFAVCVIVSNLKLALVTHYWTWLTHVVTWGSILTFFLFAIVFN 77
>SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 40.7 bits (91), Expect = 0.003
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 153 EEKFSEVVLHCRSVICCRVTPLQKAMVVELIKKSRKAVTLAIGDGANDVSMIKAAHIGV- 211
++ +++ + + ++ R +P QK ++VE +++ A+ GDG ND +K A IG+
Sbjct: 131 DKDIDDILKNHKEIVFARTSPQQKLIIVEGCQRNG-AIVAVTGDGVNDSPALKKADIGIA 189
Query: 212 -GISGQE 217
GISG +
Sbjct: 190 MGISGSD 196
>SB_56051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 37.1 bits (82), Expect = 0.038
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 185 KSRKAVTLAIGDGANDVSMIKAAHIGVGI 213
KSR VTL GDG NDV +K AH GV +
Sbjct: 8 KSRGYVTLMCGDGTNDVGALKHAHCGVAL 36
>SB_48905| Best HMM Match : Acid_phosphat_B (HMM E-Value=5.8)
Length = 355
Score = 37.1 bits (82), Expect = 0.038
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 2 AGIKIWVLTGDKQETAINIGYSCQLLT 28
AGIKIW+LTGDK ETA I S +L++
Sbjct: 226 AGIKIWMLTGDKLETATCIAQSSRLVS 252
>SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1154
Score = 34.7 bits (76), Expect = 0.20
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 170 RVTPLQKAMVVELIKKSRKAVTLAIGDGANDVSMIKAAHIGVGISGQEGMQ-AVLASDYS 228
RV+P K +V+ +++ V + GDG ND +K A IG+ + G+ G + A++
Sbjct: 663 RVSPRHKVAIVKALQQHGHVVAMT-GDGVNDAVALKRADIGIAM-GKSGTDVSKEAAEMI 720
Query: 229 IAQFRFLQRLLLV-HGRWSYYRMCKFLRY 256
+ F + + G+ +Y + F+R+
Sbjct: 721 LVDDDFNTIMAAIEEGKGIFYNIKNFVRF 749
>SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 34.3 bits (75), Expect = 0.26
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 21/177 (11%)
Query: 164 RSVICCRVTPLQKAMVVELIKKSRKAVTLAIGDGANDVSMIKAAHIGVGISGQEGMQAVL 223
R+ + RV P K+ +V +++ + ++ GDG ND +K A IGV + G A
Sbjct: 690 RARLFSRVEPSHKSKIVTYLQEEGE-ISAMTGDGVNDAPALKKAEIGVAM-GSGTAVAKT 747
Query: 224 ASDYSIAQFRFLQRLLLVHGRWSYYRMCKFLRYFFYKNFAFTVCHFWFAFFCGFSAQTVF 283
AS+ GR Y +F+RY N V F A A
Sbjct: 748 ASE---------------EGRSIYDNTKQFIRYLISSNIGEVVSIFLTAALGMPEALIPV 792
Query: 284 DEMFISVYNLFYTSLPVLALGVFEQDVSDATSLQFPKLYAPGHTSQLFNKTEFIKST 340
+++ NL P AL F SD ++ + + A G T+ + T+ ++ T
Sbjct: 793 QLLWV---NLMTDGPPATALS-FNPPDSDIMTVDWSNMAARGSTTAKKSATKKVRIT 845
>SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24)
Length = 1058
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 166 VICCRVTPLQKAMVVELIKKSRKAVTLAIG 195
V+CCR+TPLQ A+ LI + LA G
Sbjct: 294 VVCCRLTPLQTAIYKRLIHSKALKIKLAEG 323
>SB_43063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 31.1 bits (67), Expect = 2.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 167 ICCRVTPLQKAMVVELIKKSRKAVTLAIGDGANDVSMIKAAHIGVGISGQEGMQAVLASD 226
+ V P K + ++ ++ VT +GDG ND + AH+G+ I G AV A+D
Sbjct: 6 VFAEVLPSHKVEKIRALQ-AKGFVTAMVGDGINDSPALAQAHVGIAI-GTGTDVAVEAAD 63
>SB_10655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 774
Score = 30.7 bits (66), Expect = 3.3
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 374 LLGSVVATILIIDNTTQIALDTTYWTVFNHVTIWGSLVSYFVLDYFYN--YAIGGPYVGS 431
++ +T ++ D T + + ++ + H TI G V +++Y+Y+ I GPY
Sbjct: 189 IVAGTTSTTIVAD--TSLPMVDPWYKI--HATIIGGSVE-LIIEYYYSNKVPIDGPYKTD 243
Query: 432 LTVALTQPTFWFTAVLTMII 451
L +++ PT F MI+
Sbjct: 244 LKLSVPNPTLMFNKDSHMIL 263
>SB_12715| Best HMM Match : Adeno_E1A (HMM E-Value=1.3)
Length = 909
Score = 30.7 bits (66), Expect = 3.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 332 NKTEFIKSTLHGCFTSLVLFLIPYGTYNDGLAADGRVLSDHMLLGSVVATILII 385
++ EF KS T +V+ L+ + LA+D +V +DH + G +L I
Sbjct: 521 HEVEFWKSRGDASNTEIVMILLAVAFFGVDLASDIKVTADHFIAGDYAYGVLTI 574
>SB_563| Best HMM Match : Ank (HMM E-Value=0)
Length = 753
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 25 QLLTDDMAEVFVVDGASYDDVNKQLAKCRDSIRVVNTFMPHGPRSSDAKRDEE 77
+LL A+ V +G Y+D +A + + V + HG R DA+ DE+
Sbjct: 345 ELLKHPFAKALVNEGDLYEDTPLHIAAMKGYLGVTEILLDHGAR-IDARNDED 396
>SB_50426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 342 HGCFTSLVLFLIPYGTYNDGLAADGRVLSDHMLLGSVVATILIIDNTTQIALDTTYWTVF 401
HGC+ ++ FLI Y DG V H GS+ + N +AL + V
Sbjct: 59 HGCYC-IIFFLIGYSCARDGHVGSMNVAVKHEPTGSIATRLSSSVNRYSLALRDMPFLVL 117
Query: 402 NHVTIW 407
+ W
Sbjct: 118 LYYMHW 123
>SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 2 AGIKIWVLTGDKQETAINIGYSCQLLTDDMAEVFVVDGASYD 43
AGI + ++TGD TA +I C +L D + V+DG ++
Sbjct: 673 AGIVVRMVTGDNVNTARSIAGKCGILEPD-KDFLVLDGKEFN 713
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 138 VVNGHSLVH--CLHPKLEEKFSEVVLHCRSVI-CCRVTPLQKAMVVELIKKSRKAVTLAI 194
VV+G+ L + C+ + K + + + R+ I CCR +PL + + + K V +
Sbjct: 137 VVSGNDLDYAVCVWDARDGKLIKKLFNHRNTITCCRFSPLHNRICSTSMDNTTKIVDVRT 196
Query: 195 GD-GANDVSMIKAAHIGV 211
D +N+V++ HI +
Sbjct: 197 FDTSSNNVTLSLGGHINI 214
>SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26)
Length = 680
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 259 YKNFAFTVCHFWF-AFFCGFS-AQTVFDEMFISVYNLFYTSLPVLA-LGVF 306
YK FA C FW F S + +D F S+ +L T + +LA +G+F
Sbjct: 64 YKEFANGFCKFWMGVIFSVLSFTEIAYDHYFASMQDLDLTDILLLASVGIF 114
>SB_33520| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-09)
Length = 317
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 398 WTVFNHVTIWGSLVSYFVLDYFYNYAIGGPYVGSLTVALTQPTFWFTAVLTMIILMVPVV 457
W+V N +++ GSL S+ V+ YAI P+ A + L I+L +P++
Sbjct: 86 WSVANGISVDGSLFSFTVIAIERTYAIFAPFKHRQLTAKHYTLAISMSWLLSILLEIPIM 145
>SB_9875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 35 FVVDGASYDDVNKQLAKCRDSIRVVNTFMPHGPRSSDAKRDEEPNGAVSGRGANVKLNA 93
++V ASY ++L K RD R ++P PRS++A R N S G + +++
Sbjct: 55 YLVRLASY---GRRLYKGRDVKRRRKRYVPSRPRSTEASRSSLNNTVTSSAGFTINISS 110
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.137 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,191,827
Number of Sequences: 59808
Number of extensions: 659604
Number of successful extensions: 1726
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1693
Number of HSP's gapped (non-prelim): 40
length of query: 564
length of database: 16,821,457
effective HSP length: 86
effective length of query: 478
effective length of database: 11,677,969
effective search space: 5582069182
effective search space used: 5582069182
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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