GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001553-TA|BGIBMGA001553-PA|IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter, IPR013200|HAD superfamily
hydrolase-like, type 3
         (564 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    28   0.57 
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        25   7.1  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 0.57
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 114 YVSGGAHTSEPHEHANDDSNGFAIVVNGHSLVHCLH 149
           Y SGG  +   H   +  S G    VNG SL H  H
Sbjct: 464 YFSGGFSSLHSHHSPHHVSPGMGSTVNGASLTHSHH 499


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 173 PLQKAMVVELIKKSRKAVTLAIGDGANDVSMIKAAHIGVGISGQE-GMQAVLASDYSI 229
           PLQ+  + E+  ++     LA G GA D   +       GI+  E G +A  A++  +
Sbjct: 311 PLQQVGIREIFSQNASLPLLARGRGARDEVRVSRIFQKAGITINELGSEAYAATEIQL 368


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.137    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,795
Number of Sequences: 2123
Number of extensions: 20767
Number of successful extensions: 102
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 101
Number of HSP's gapped (non-prelim): 2
length of query: 564
length of database: 516,269
effective HSP length: 68
effective length of query: 496
effective length of database: 371,905
effective search space: 184464880
effective search space used: 184464880
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)