GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001553-TA|BGIBMGA001553-PA|IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter, IPR013200|HAD superfamily
hydrolase-like, type 3
         (564 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   6.7  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   8.9  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 13/47 (27%), Positives = 18/47 (38%)

Query: 280 QTVFDEMFISVYNLFYTSLPVLALGVFEQDVSDATSLQFPKLYAPGH 326
           Q V +E       L  + LP        QD+  +   QF K+Y   H
Sbjct: 223 QLVIEEQSTEQERLLLSVLPEHVAVKMRQDLGASLDTQFKKIYMSRH 269


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 364 ADGRVLSDHMLLGSVVATILIIDNTTQIALDTTYWTVFNHVTIWGSLVSYFVLDYFYNYA 423
           A G  L  HML  ++  T+L    T   A+DT   +V  ++    SL   F+L  F N  
Sbjct: 123 AYGVALLLHMLTTTITLTLLAYQATKIHAVDTYAASVVGYLLY--SLGQVFMLCIFGNRL 180

Query: 424 I 424
           I
Sbjct: 181 I 181


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.137    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,292
Number of Sequences: 429
Number of extensions: 5609
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 2
length of query: 564
length of database: 140,377
effective HSP length: 61
effective length of query: 503
effective length of database: 114,208
effective search space: 57446624
effective search space used: 57446624
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 46 (22.6 bits)