GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001552-TA|BGIBMGA001552-PA|IPR006539|Phospholipid-
translocating P-type ATPase, flippase, IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
         (637 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.39 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   3.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 27.1 bits (57), Expect = 0.39
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 325 TVVPISLYVSVEVIRFAQSFLINWDEKMYYE 355
           TV+PI ++ S E I F + F ++    M+YE
Sbjct: 287 TVIPIHVWTSKEKISFLRGFWLSPAVDMFYE 317


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 17  IKTSKYSIITFLPLNLLEQFQRLANFYFLCLLVL 50
           ++T K S+  FL  + +E FQ   +F++  LL L
Sbjct: 137 VQTEK-SVFDFLCRHTVEYFQNYIHFFYQLLLYL 169


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.138    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,391
Number of Sequences: 317
Number of extensions: 5978
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 2
length of query: 637
length of database: 114,650
effective HSP length: 61
effective length of query: 576
effective length of database: 95,313
effective search space: 54900288
effective search space used: 54900288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)