Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001552-TA|BGIBMGA001552-PA|IPR006539|Phospholipid-
translocating P-type ATPase, flippase, IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.) 217 3e-56
SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 7e-48
SB_51449| Best HMM Match : tRNA-synt_2c (HMM E-Value=1.4) 157 3e-38
SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85) 101 2e-21
SB_272| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 7e-13
SB_48903| Best HMM Match : E1-E2_ATPase (HMM E-Value=3) 58 3e-08
SB_48905| Best HMM Match : Acid_phosphat_B (HMM E-Value=5.8) 43 9e-04
SB_21895| Best HMM Match : E1-E2_ATPase (HMM E-Value=0.008) 42 0.001
SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.006
SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.23
SB_14419| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 34 0.30
SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 33 0.92
SB_9010| Best HMM Match : RVP (HMM E-Value=0.14) 30 4.9
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.5
SB_53041| Best HMM Match : E1-E2_ATPase (HMM E-Value=5.7e-20) 30 6.5
SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.5
>SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1138
Score = 217 bits (529), Expect = 3e-56
Identities = 158/489 (32%), Positives = 249/489 (50%), Gaps = 69/489 (14%)
Query: 11 ESTNNYIKTSKYSIITFLPLNLLEQFQRLANFYFLCLLVLQLIPAISSLTPITTAIPLIG 70
++ +N IKT+KY+I +F+P NL EQF R AN YFL ++ L +PAI++ +PLI
Sbjct: 35 DNRDNKIKTTKYTIWSFIPKNLFEQFHRFANIYFLFIVGLNWVPAINAFGKEIAMLPLIF 94
Query: 71 VLALTAVKDAYDDFQRHQNDSQVNHR--RAKTLRNGKLVEEKWASVQVGDVIRLENDQFV 128
VLA+TAVKD ++D +R+ +D +VN+ + + + + KW V VG
Sbjct: 95 VLAVTAVKDLFEDRRRYNSDKKVNNTICQVYSSASASYIATKWKDVVVG----------- 143
Query: 129 AADILLLSSSE--PNGLCYIETAELDGETNLKCRQCLLETAAMGQDDAQLGAFDGEIVCE 186
DI+ LSS+E P + + +++ E N+ C +ETA + DGE
Sbjct: 144 --DIIKLSSNEIIPADILLLNSSD---ENNI----CYVETANL----------DGET--- 181
Query: 187 TPNNLLNKFEGTLSWRNQHFSLDNDKILLRGCVLRNTSWCYGVVVFAGKDTKLMQNSGKT 246
L R L + +LLRGC++RNT GVVV+AG DTK M N+
Sbjct: 182 -----------NLKQREVVNGLFEENLLLRGCIVRNTKNVEGVVVYAGHDTKAMLNNSGP 230
Query: 247 KFKRTSIDRLLNFLIIGIVFFLLSMCVFCTVACGVWEWLVGRYFQVYLPWDTLVPADPTW 306
+ K + ++R LN +I V L ++C + CG+W +F + P +
Sbjct: 231 RSKHSKVERDLNLDVIACVVILFTLCFLGGLGCGIWTQN-NDFFNAHF-----APGGES- 283
Query: 307 GAVIIALLVFFSYAIVMNTVVPISLYVSVEVIRFAQSFLINWDEKMYYEXXXXXXXXXXX 366
A + + F+++ I++ ++P SLYVS E+++ Q FLI+ D ++Y+E
Sbjct: 284 SAPMEGFIRFWTFIIILQVLIPYSLYVSAELVKLGQVFLISSDLQLYHEETDQPVICRAL 343
Query: 367 XLNEELGQIQYIFSDKTGTLTQNIMTFNKCSIAGVCYGDVVDETTGETLEINESSEPLDF 426
+NE+LGQI+Y+FSDKTGTLT+N M F KC+I GV Y G+ L S+ D
Sbjct: 344 NINEDLGQIKYVFSDKTGTLTENKMVFKKCTIGGVNYPH-ESAQGGKDLPDAGPSDTEDE 402
Query: 427 SFNPEYEPEFKF---FDPTLLDAVKRGDSH---------VHDFFRLLALCHTVMPDQKNG 474
+ + + +D L + GDS+ V +FF LL++C+TV+ ++
Sbjct: 403 QYMQQVSSQEMSELPYDADLAQVIS-GDSYKDNGSQSSFVREFFILLSICNTVVVNKHAR 461
Query: 475 RLEYQAQSP 483
YQ+ P
Sbjct: 462 PHPYQSGPP 470
Score = 104 bits (250), Expect = 2e-22
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 14/171 (8%)
Query: 476 LEYQAQSPDESALVSAARNFGFVFRERSPNSITIEVMGNTEV-YELLCILDFNNVRKRMS 534
+ Y+A+SPDE+ALV A ++G+ RSPNS+TI + G V +++L +L F++ RKRMS
Sbjct: 591 ISYEAESPDEAALVKMACSYGYRLLSRSPNSVTIFIPGEGVVKFKVLHVLSFDSTRKRMS 650
Query: 535 VILRK--DGEIRLYTKGADNVIYERL-------KATKGDVKS----KTQEHLNKFAGEGL 581
V++R+ DG + +Y KGAD+ + RL +A +G VKS + HL +A +GL
Sbjct: 651 VVVRRPSDGAVLMYCKGADSAVLTRLTHASYADEAVEGGVKSTLVNQIDRHLTMYARDGL 710
Query: 582 RTLALAWRPLEERGFAEWKXXXXXXXXXXXXXXEQLDAIYEEIETDLLLLG 632
RTL +A R L + + +W L +++E+++ LLG
Sbjct: 711 RTLCMAKRELSDSEYHDWLTEHKRAETALQHRERLLQESAQKLESNMELLG 761
>SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 189 bits (460), Expect = 7e-48
Identities = 121/280 (43%), Positives = 156/280 (55%), Gaps = 42/280 (15%)
Query: 368 LNEELGQIQYIFSDK------TGTLTQNIMT----------FNKCSIAGVCY-----GD- 405
L EELGQI+YIFSDK + TL + + F S+ +C GD
Sbjct: 298 LTEELGQIEYIFSDKVLPDLFSNTLQKPLYIRLVVPSSAARFIAASLTALCNITVGKGDP 357
Query: 406 ---VVDETTGETL--EINESSEPLDFSFNPEYEPEFKFFDPTLLDAVKRGDSHVHDFFRL 460
V D E E +E S +DFS NP Y+ +F+F D L+D + H+ RL
Sbjct: 358 DENVPDACISELTIPEEDELSPLVDFSSNPYYDGKFRFHDKALIDDIANNSQGCHEMMRL 417
Query: 461 LALCHTVMPDQKNGRLEYQAQSPDESALVSAARNFGFVFRERSPNSITIEVMGNTEVYEL 520
LALCHTVM D L YQAQSPDE+ALV+AARNFGFVF+E+ +EL
Sbjct: 418 LALCHTVMIDNAEEGLVYQAQSPDEAALVTAARNFGFVFKEQ---------------HEL 462
Query: 521 LCILDFNNVRKRMSVILRKDGEIRLYTKGADNVIYERLKATKGDVKSKTQEHLNKFAGEG 580
L ILDFNN RKRMSVI+R++ +I+LY KGAD++IYERL + + KT E LNKFA EG
Sbjct: 463 LAILDFNNDRKRMSVIVRRNDKIKLYCKGADSIIYERLHPSCTSLMDKTTEDLNKFAAEG 522
Query: 581 LRTLALAWRPLEERGFAEWKXXXXXXXXXXXXXXEQLDAI 620
LRTL LA++ + + + WK EQ+ A+
Sbjct: 523 LRTLVLAYKDITPQDYQAWKSKYDKACVAMDNREEQVQAV 562
Score = 119 bits (286), Expect = 8e-27
Identities = 52/92 (56%), Positives = 72/92 (78%)
Query: 10 HESTNNYIKTSKYSIITFLPLNLLEQFQRLANFYFLCLLVLQLIPAISSLTPITTAIPLI 69
H +N+I+TSKY+IITFLP NL EQFQR+AN YFL +++ IP I++L P +TA+PL+
Sbjct: 46 HHYKDNFIRTSKYTIITFLPKNLFEQFQRVANMYFLLQVIIMSIPEITALKPESTAVPLV 105
Query: 70 GVLALTAVKDAYDDFQRHQNDSQVNHRRAKTL 101
V+ TA+KDAYDD +RHQ+D VN+R++K L
Sbjct: 106 FVIGFTAIKDAYDDIRRHQSDRGVNNRKSKAL 137
Score = 39.5 bits (88), Expect = 0.008
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 152 DGETNLKCRQCLLETAAMGQDDAQLGAFDG-EIVCETPNNLLNK--FEGTLSW 201
+ ETNLKCRQ L +T MG D+A L + ++ + PN +N F GT W
Sbjct: 140 NSETNLKCRQPLPDTNEMGDDEAFLPSLKNFQVFLQWPNFYMNNVVFIGTCHW 192
Score = 37.1 bits (82), Expect = 0.043
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 290 FQVYLPWDTLVPADPTWGAVIIALLVFFSYAIVMNTVVPISLYVSVEVIRFAQSFLIN 347
FQV+L W + V I + S+ +V+NT++PISLY+SV I + IN
Sbjct: 170 FQVFLQWPNFYMNN----VVFIGTCHWPSFIMVLNTLIPISLYISVGEISLGKGVWIN 223
>SB_51449| Best HMM Match : tRNA-synt_2c (HMM E-Value=1.4)
Length = 742
Score = 157 bits (380), Expect = 3e-38
Identities = 80/185 (43%), Positives = 117/185 (63%), Gaps = 5/185 (2%)
Query: 452 SHVHDFFRLLALCHTVMPD---QKNGRLEYQAQSPDESALVSAARNFGFVFRERSPNSIT 508
S + +F LL++CHTV+P+ Q ++ YQA SPDE ALV A+ GF F R+P S+
Sbjct: 318 SVIREFLTLLSVCHTVVPERDTQNPDKIIYQAASPDEGALVKGAKKLGFSFNVRTPTSVI 377
Query: 509 IEVMGNTEVYELLCILDFNNVRKRMSVILR-KDGEIRLYTKGADNVIYERLKATKGDVKS 567
I MG EVYE+L +L+FN+ RKRMSVI+R +G+I+LY KGAD V++ER++ + +++
Sbjct: 378 INAMGKEEVYEILNVLEFNSTRKRMSVIVRTPEGKIKLYCKGADTVVFERMRENQLYLET 437
Query: 568 KTQEHLNKFAGEGLRTLALAWRPLEERGFAEWKXXXXXXXXXXXXXXEQLDAIYEEIETD 627
T +HL +FA EGLRTL +A L+ ++EW +++D E IE +
Sbjct: 438 -TVKHLEEFAKEGLRTLCIAMSELDPEEYSEWSKIYYQASTSLENRADKVDEAAELIERN 496
Query: 628 LLLLG 632
L LLG
Sbjct: 497 LFLLG 501
Score = 69.7 bits (163), Expect = 7e-12
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 16/213 (7%)
Query: 176 LGAFDGEIVCETPNNLLNKFEGTLSWRNQH-FSLDNDKILLRGCVLRNTSWCYGVV-VFA 233
+ G + CE PNN L F G ++ + L D++LLRG LRNT W + +
Sbjct: 104 IALLQGRVECEGPNNRLYDFVGNIALTGKKPVPLSADQVLLRGAQLRNTQWVFAKLREIT 163
Query: 234 GKDTKLMQNSGKTKFKRTSIDRLLNFLII-GIVFFLLSMCVFCTVACGVWEWLVGR--YF 290
K + K K + +S R +I G+V + + + A + V
Sbjct: 164 RKFVDYADYAEKAKLRASSQARNSRSPVINGVVTY--REALLNSTAAPIKRSNVDHTTNI 221
Query: 291 QVYLPWDTLVPAD--PTWGAVIIALL-------VFFSYAIVMNTVVPISLYVSVEVIRFA 341
Q+ + L+ T G + A L F ++ I+ N ++PISL V++EV++F
Sbjct: 222 QILFLFGLLMALALCSTIGFYVWAELPPQNYGLTFLTFIILYNNLIPISLTVTLEVVKFI 281
Query: 342 QSFLINWDEKMYYEXXXXXXXXXXXXLNEELGQ 374
Q+ IN D MYY LNEELGQ
Sbjct: 282 QAIFINLDIDMYYAPSDTPAMARTSNLNEELGQ 314
Score = 49.6 bits (113), Expect = 8e-06
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 14 NNYIKTSKYSIITFLPLNLLEQFQRLANFYFLCLLVLQLIPAISSLTPITTAIPLIGVLA 73
NN I T+KY+ +TFLP LLEQF R +N +FL + +LQ + P +G +A
Sbjct: 71 NNKISTAKYNFLTFLPKFLLEQFSRYSNVFFLFIALLQ--GRVECEGPNNRLYDFVGNIA 128
Query: 74 LTAVK 78
LT K
Sbjct: 129 LTGKK 133
>SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85)
Length = 1459
Score = 101 bits (242), Expect = 2e-21
Identities = 58/142 (40%), Positives = 88/142 (61%), Gaps = 11/142 (7%)
Query: 454 VHDFFRLLALCHTVMPDQKNGR-----LEYQAQSPDESALVSAARNFGFVFRERSPNSIT 508
V DF+ LALCHTV + + + YQA SPDE ALV FG V+R + +
Sbjct: 930 VLDFYLALALCHTVQASKSSDQESIYEFHYQASSPDEKALVEQL--FGIVYRGKVGEDME 987
Query: 509 IEVMGNTEVYELLCILDFNNVRKRMSVILR-KDGEIRLYTKGADNVIYERLKATKGDVKS 567
+++ G + Y LL +L+F++ RKRMSVI++ +G+ + TKGA+ I +RL++ DV
Sbjct: 988 VQMQGTSHRYTLLHVLEFDSTRKRMSVIVKTAEGQYLMLTKGAETAILDRLESGPKDV-- 1045
Query: 568 KTQEHLNKFAGEGLRTLALAWR 589
T +H++ +A +GLRTLA+A R
Sbjct: 1046 -TADHVDGYAEQGLRTLAVAQR 1066
Score = 82.2 bits (194), Expect = 1e-15
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 238 KLMQNSGKTKFKRTSIDRLLNFLIIGIVFFLLSMCVFCTVACGVWEWLVGRYFQVYLPWD 297
++ N + K +++++ +N +I + L+ CT W+ Y D
Sbjct: 40 RMALNQAEAPHKFSTVEKTMNTFLIVFLLVLVLQGAICT-GLKYWKESTVPGKAPYAN-D 97
Query: 298 TLVPADPTWGAVIIALLVFFSYAIVMNTVVPISLYVSVEVIRFAQSFLINWDEKMYYEXX 357
+ + A T+ VI LVF I+ N V+PISLYV+VE+ +F + WD KMY
Sbjct: 98 SGI-ASVTFKGVIEDFLVFL---ILYNYVIPISLYVTVELQKFIGALFFAWDVKMYNPDT 153
Query: 358 XXXXXXXXXXLNEELG----------QIQYIFSDKTGTLTQNIMTFNKCSIAGVCY 403
LNEELG Q++Y+F+DKTGTLT+N M F +CSI G Y
Sbjct: 154 DEPAIANTSDLNEELGQKNKVLAWPFQVEYVFTDKTGTLTENDMQFKECSINGKKY 209
>SB_272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 72.9 bits (171), Expect = 7e-13
Identities = 30/78 (38%), Positives = 54/78 (69%)
Query: 81 YDDFQRHQNDSQVNHRRAKTLRNGKLVEEKWASVQVGDVIRLENDQFVAADILLLSSSEP 140
Y+D+ RH+ D +VN R + +G + + + ++VGD++R+++++ D+++L+S +P
Sbjct: 15 YEDYLRHKVDKEVNSRPCGVVFDGIVKDIQSKDIKVGDIVRVKDNEEFPCDLIVLASDDP 74
Query: 141 NGLCYIETAELDGETNLK 158
G C+I TA LDGETNLK
Sbjct: 75 EGKCHITTANLDGETNLK 92
>SB_48903| Best HMM Match : E1-E2_ATPase (HMM E-Value=3)
Length = 351
Score = 57.6 bits (133), Expect = 3e-08
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 316 FFSYAIVMNTVVPISLYVSVEVIRFAQSFLINWDEKMYYEXXXXXXXXXXXXLNEELGQI 375
FF + ++ + ++P+SL VS+++ + S++I D+ + + EELG+I
Sbjct: 211 FFRFVLLFSYIIPLSLRVSLDMGKVVYSWMIAHDKDI------PGTVVRSSTIPEELGRI 264
Query: 376 QYIFSDKTGTLTQNIMTFNKCSIAGVCYG-DVVDE 409
Y+ +DKTGTLTQN M F + + V +G D ++E
Sbjct: 265 GYLLTDKTGTLTQNEMVFKRLHLGTVSFGTDSMEE 299
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 112 ASVQVGDVIRLENDQFVAADILLLSSSEPNG 142
+ ++V D+I +E +Q V AD++ L +SE NG
Sbjct: 46 SEIKVSDLIFVEKNQRVPADMVFLRTSEKNG 76
>SB_48905| Best HMM Match : Acid_phosphat_B (HMM E-Value=5.8)
Length = 355
Score = 42.7 bits (96), Expect = 9e-04
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 487 ALVSAARNFGFVFRERSPNSITIEV-MGNTEVYELLCILDFNNVRKRMSVILR--KDGEI 543
ALVS G R +S+ I+ G T V+ +L I F + KRM +I++ GEI
Sbjct: 130 ALVSWTEEVGLTLVHRDLSSMRIQTPAGQTLVFSILQIFPFTSETKRMGIIVKDTSSGEI 189
Query: 544 RLYTKGADNVI 554
Y KGAD V+
Sbjct: 190 TFYMKGADVVM 200
>SB_21895| Best HMM Match : E1-E2_ATPase (HMM E-Value=0.008)
Length = 659
Score = 42.3 bits (95), Expect = 0.001
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 518 YELLCI--LDFNNVRKRMSVILRKDG--EIRLYTKGADNVIYERLKATKGDVKSKTQEHL 573
YE+ + F++ +RMSVI R G + +Y KGA I + V QE L
Sbjct: 463 YEIAIVRQFPFSSDVQRMSVITRTLGANHMDVYAKGAPETIAALCRPES--VPLNFQEEL 520
Query: 574 NKFAGEGLRTLALAWRPLEER 594
N + +G R L LAWRP++++
Sbjct: 521 NIYTKQGFRVLGLAWRPMKKK 541
>SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 39.9 bits (89), Expect = 0.006
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 523 ILDFNNVRKRMSVILRK-DGEIRLYTKGADNVIYERLKATKG-----------DVKSKTQ 570
+ FN+ RK MS +R DG RL++KGA ++ R + G D S Q
Sbjct: 546 VYTFNSSRKSMSTAIRMPDGGYRLFSKGASEILLSRCTSIIGRNGQPEPFSSQDCLSLVQ 605
Query: 571 EHLNKFAGEGLRTLALAWR 589
+ A +GLRT+ +A+R
Sbjct: 606 SVIEPMASDGLRTICMAYR 624
>SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1154
Score = 34.7 bits (76), Expect = 0.23
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 370 EELGQIQYIFSDKTGTLTQNIMTFNKCSIAGVCYGDVVDETTGETLEINESSEPLDFSFN 429
E LG I SDKTGTLT+N MT ++ A Y + E+ + +P+ ++ N
Sbjct: 408 ETLGCSSVICSDKTGTLTKNEMTVSQIFTADGFYAEATGVGYSPLGEVILNEDPITYTSN 467
>SB_14419| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 543
Score = 34.3 bits (75), Expect = 0.30
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 370 EELGQIQYIFSDKTGTLTQNIMTFNKCSIAGVCY-GDVVDETTGETLEINES 420
E LG I SDKTGTLTQN MT + D ++ +G +E E+
Sbjct: 332 ETLGSTSTICSDKTGTLTQNRMTVAHMWFDNKTFEADTTEDQSGTAMEKTET 383
Score = 30.7 bits (66), Expect = 3.7
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 57 SSLTPITTAIPLIGVLALTAVKDAYDDFQRHQ-NDSQVNH--RRAKTLRNGKLVEEKWAS 113
SS+ + + L V+ +TA Y + + + DS N + A LR+GK V +
Sbjct: 92 SSVEKLYLGVTLTFVVVVTACFSYYQESKSSKIMDSFKNMVPQEATILRDGKKVVKNAEQ 151
Query: 114 VQVGDVIRLENDQFVAADILLLSSSEPNGLCYIETAELDGETNLKCR 160
V +GD+I + V ADI ++ E G ++ + L GE+ + R
Sbjct: 152 VVIGDIIFVAIGDRVPADIRVI---ESKGF-KVDNSSLTGESEPQAR 194
>SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1003
Score = 32.7 bits (71), Expect = 0.92
Identities = 16/23 (69%), Positives = 16/23 (69%)
Query: 370 EELGQIQYIFSDKTGTLTQNIMT 392
E LG I SDKTGTLTQN MT
Sbjct: 364 ETLGSTSTICSDKTGTLTQNRMT 386
>SB_9010| Best HMM Match : RVP (HMM E-Value=0.14)
Length = 711
Score = 30.3 bits (65), Expect = 4.9
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 546 YTKGADNVIYERLKATKGDVKSKTQEHLNKFAGEGLRTLALAWR 589
+ +GA NVIYERL + + K E ++ F E L+ L+L W+
Sbjct: 350 HCQGARNVIYERLVFNQRN--QKEGERMDNFVSE-LKRLSLTWK 390
>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2835
Score = 29.9 bits (64), Expect = 6.5
Identities = 23/106 (21%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 246 TKFKRTSIDRLLNFLIIGIVFFLLSMCVFCTV-ACGVWEW-----LVGRYFQVYL---PW 296
TK T+++ LL+FL++ ++F+L ++ V G++E+ + F L +
Sbjct: 2504 TKTLSTAVEPLLSFLLVFLIFYLAYSSIYYLVFGSGIYEYRSMVSTIETLFSTLLGGYDY 2563
Query: 297 DTLVPADPTWGAVIIALLVFFSYAIVMNTVVPISLYVSVEVIRFAQ 342
+ DP G + FFS+ ++M ++ +++++++ + FA+
Sbjct: 2564 HAIANHDPILGPAL-----FFSFQMIM-VMILMNVFLTILMDAFAE 2603
>SB_53041| Best HMM Match : E1-E2_ATPase (HMM E-Value=5.7e-20)
Length = 704
Score = 29.9 bits (64), Expect = 6.5
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 68 LIGVLALTAVKDAYDDFQRHQNDSQV-----NHRRAKTLRNGKLVEEKWASVQVGDVIRL 122
++G A+ + D+ R ++ ++ + R+ + +R G++ E + V+VGD+ +
Sbjct: 122 ILGTAAVIVLLSTLSDYLREKSFYRLQKRIESERKTRVMRGGEMKEICYQDVKVGDLCVI 181
Query: 123 ENDQFVAADILLLSSSE 139
+ AD +L+ ++E
Sbjct: 182 GPGSIIPADGILVENTE 198
>SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 29.9 bits (64), Expect = 6.5
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 370 EELGQIQYIFSDKTGTLTQNIMTFNK 395
E LG I SDKTGTLT N M+ +K
Sbjct: 355 ETLGCTSVICSDKTGTLTTNQMSVHK 380
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.138 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,903,541
Number of Sequences: 59808
Number of extensions: 807036
Number of successful extensions: 1703
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1650
Number of HSP's gapped (non-prelim): 43
length of query: 637
length of database: 16,821,457
effective HSP length: 87
effective length of query: 550
effective length of database: 11,618,161
effective search space: 6389988550
effective search space used: 6389988550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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