Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001551-TA|BGIBMGA001551-PA|IPR000626|Ubiquitin,
IPR006636|Heat shock chaperonin-binding,
IPR000449|Ubiquitin-associated, IPR008927|6-phosphogluconate
dehydrogenase, C-terminal-like, IPR009060|UBA-like
(523 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 46 6e-07
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 46 6e-07
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 39 1e-04
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 38 2e-04
AF265298-1|AAG17641.1| 124|Tribolium castaneum putative cytochr... 23 3.9
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 46.0 bits (104), Expect = 6e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 46.0 bits (104), Expect = 6e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 6e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 6e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 6e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 6e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 46.0 bits (104), Expect = 6e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 471 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 528
Score = 46.0 bits (104), Expect = 6e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 547 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 604
Score = 46.0 bits (104), Expect = 6e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 623 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 680
Score = 43.6 bits (98), Expect = 3e-06
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I+ +K + K P+Q IFAGK + D TL +NI+ T+HLV++
Sbjct: 395 LEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLR 452
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 38.7 bits (86), Expect = 1e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 39 LSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+ K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 44
Score = 35.1 bits (77), Expect = 0.001
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIK 71
+E+E I+ +K + K P+Q IFAGK + D TL +NI+
Sbjct: 63 LEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQ 110
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 37.5 bits (83), Expect = 2e-04
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIK 71
+E+E I+ +K + K P+Q LIFAGK + D TL +NI+
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
>AF265298-1|AAG17641.1| 124|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 124
Score = 23.4 bits (48), Expect = 3.9
Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 359 ANNPQLQDQIRTMMPQLLAQLQNPEMQQMMSNPQALNALLQIQQGMEQLRTAAPSLVNNL 418
A NP++Q+++ + ++ ++N MQQ+ Q + L + + ++L + P + L
Sbjct: 13 AENPKVQEKLYEEVAAVIDNIENITMQQL----QEMKYLEMVLKEAQRLYPSVPVIERRL 68
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.315 0.128 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,199
Number of Sequences: 317
Number of extensions: 2770
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 14
length of query: 523
length of database: 114,650
effective HSP length: 60
effective length of query: 463
effective length of database: 95,630
effective search space: 44276690
effective search space used: 44276690
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)
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