Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001551-TA|BGIBMGA001551-PA|IPR000626|Ubiquitin,
IPR006636|Heat shock chaperonin-binding,
IPR000449|Ubiquitin-associated, IPR008927|6-phosphogluconate
dehydrogenase, C-terminal-like, IPR009060|UBA-like
(523 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 54 4e-08
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 46 1e-05
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 46 1e-05
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 46 1e-05
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 46 1e-05
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 46 1e-05
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 40 6e-04
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 37 0.008
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 36 0.010
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 36 0.014
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 34 0.042
SPBC800.12c |||ubiquitin family protein, unknown|Schizosaccharom... 33 0.073
SPAC15A10.02 |taf12||transcription factor TFIID complex subunit ... 33 0.097
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 32 0.22
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 30 0.90
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 30 0.90
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 29 2.1
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 28 2.8
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 28 3.6
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 28 3.6
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 27 4.8
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.8
SPAC23C4.09c |||DNA-binding TFAR19-related protein|Schizosacchar... 27 6.4
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 6.4
SPAC16A10.03c |||zinc finger protein Pep5/Vps11 |Schizosaccharom... 27 6.4
SPBC31E1.03 |hub1|ubl4|ubiquitin-like protein modifier Hub1|Schi... 27 6.4
SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces pombe... 27 8.4
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 54.4 bits (125), Expect = 4e-08
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 17/192 (8%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKXX 83
V ++ ++ + LKE ++ E E+ LI+AG+++ D ++LK + I+DG ++HLV
Sbjct: 18 VTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTLG 77
Query: 84 XXXXXXXXXXXXXXDVSATPFXXXXXXXXXXXXXXXXXXXTF-MDL-QARMQQELLSNP- 140
T F + + A M NP
Sbjct: 78 QNPAAAATNVSDRTQQVPTNIQAGQGANNPLANLTSARYAGFNIPMPSASMFGPNPENPV 137
Query: 141 ----DMLRQVLDNPLVQ----QMMNDPENMRSLITSNPQMQDL------MSRNPEISHML 186
+ L +L NP+VQ +M ++P+ + +I S+P +++ M ++PE +
Sbjct: 138 PPSTEELANMLSNPMVQSSINEMFSNPQMLDMIINSSPHLRNAPPYVRQMMQSPEFRRAM 197
Query: 187 NNPELLRQTMEL 198
+P+ +RQ +L
Sbjct: 198 TDPDTMRQMAQL 209
Score = 45.2 bits (102), Expect = 2e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 475 EQRYSQQLEQLAAMGFLNREANLQALIATFGDVNAAVERLLA 516
E+RY++QL QL MGF++ E N+QAL + G+V A+E LL+
Sbjct: 311 EERYAEQLSQLNEMGFVDFERNVQALRRSGGNVQGAIESLLS 352
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 327 SMLSAPYTNSMLQALSADPEMASQLINQNPMFANNPQLQDQIRTMMPQLLAQLQNPEMQQ 386
+MLS P S + + ++P+M +IN +P N P P + +Q+PE ++
Sbjct: 146 NMLSNPMVQSSINEMFSNPQMLDMIINSSPHLRNAP----------PYVRQMMQSPEFRR 195
Query: 387 MMSNPQALNALLQIQQGMEQLRTAAPSLVNNLGMGVG 423
M++P + + Q+ Q Q+ A ++ +G G+G
Sbjct: 196 AMTDPDTMRQMAQLHQ---QMGAAGIDPMSLMGGGLG 229
Score = 31.1 bits (67), Expect = 0.39
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 126 MDLQARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQM 172
+D+ L + P +RQ++ +P ++ M DP+ MR + + QM
Sbjct: 167 LDMIINSSPHLRNAPPYVRQMMQSPEFRRAMTDPDTMRQMAQLHQQM 213
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 157 NDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRS 211
N P S+ NP+ + E+++ML+NP + E+ NP ML ++ S
Sbjct: 120 NIPMPSASMFGPNPE-NPVPPSTEELANMLSNPMVQSSINEMFSNPQMLDMIINS 173
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 91 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 243 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 319 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
+E+E I +K + K P+Q LIFAGK + D TL +NI+ T+HLV++
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 23 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVI 80
+++I+ + + R+KE + K P Q LI+AGK M D + ++++ G +HLV+
Sbjct: 14 ELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVL 71
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 25 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKD 72
++ D I LKE + ++ + E E+ LI++G+I+ D T+ ++NIK+
Sbjct: 17 DVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKE 64
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 36.3 bits (80), Expect = 0.010
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 458 RMMSAMSXXXXXXXXXXEQRYSQQLEQLAAMGFLNREANLQALIATFGDVNAAVERLLAL 517
R S+ + RY+ L L MGF + N AL T GDV A+E+++
Sbjct: 138 RTKSSSQSSPMASTSTSKSRYADSLSTLHDMGFSDDSVNTHALEETNGDVTRAIEKIVQH 197
Query: 518 G 518
G
Sbjct: 198 G 198
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 35.9 bits (79), Expect = 0.014
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 152 VQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAML---QEL 208
VQ+ +ND +M + S ++ D+++R E+S + +N + + R A + EL
Sbjct: 333 VQRKLNDLRDMSKYVLSEKEVSDIINRKKELSRVPSNIAAEKTRLRQRRQAAYVAGNAEL 392
Query: 209 MRSHDRALSNLESIPGGYN 227
++ D L+ LE + G N
Sbjct: 393 VKEIDDQLNTLEELSMGSN 411
>SPBC1E8.02 |||ubiquitin family protein,
unknown|Schizosaccharomyces pombe|chr 2|||Manual
Length = 603
Score = 34.3 bits (75), Expect = 0.042
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 25 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQ--HNIKDGLTVHLVI 80
++ + LKE+++ F ++L LI AG+++ + L++ H+ D +T HLVI
Sbjct: 19 QVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILHDATDLVTFHLVI 76
>SPBC800.12c |||ubiquitin family protein,
unknown|Schizosaccharomyces pombe|chr 2|||Manual
Length = 137
Score = 33.5 bits (73), Expect = 0.073
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 25 EIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLT 75
EI + I LKEVL+S+ ST+P + L++ GK + ++ L + D ++
Sbjct: 75 EINVQSTILELKEVLASQLSTQPSSIRLMYKGKPLVNSRLLDDYVDADSVS 125
>SPAC15A10.02 |taf12||transcription factor TFIID complex subunit A
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 33.1 bits (72), Expect = 0.097
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Query: 128 LQARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQD-LMSRNPEISHML 186
LQ Q L N +L+Q+ N +QQ +P N R N Q Q L+ R+ ++
Sbjct: 71 LQGHAQSGQLPNQQLLQQLQSNGALQQGTPEPSNTRPRPQLNAQEQTMLLVRHRQLQTAQ 130
Query: 187 NNPELLRQTMELARNPAMLQELMRSHDR-ALSNLES-----IPGGYNALQRMYRDIQEPM 240
N +++ + +N E + + R AL ES I A+ R IQ+
Sbjct: 131 NYLTEMKEALGRIKNELSTNERLDTSAREALVKQESELTVKIAQFTAAISNGIRSIQQLQ 190
Query: 241 LNVASSMAGN 250
ASS GN
Sbjct: 191 NRQASSANGN 200
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/88 (20%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 330 SAPYTNSMLQALSADPEMASQLINQNPMFAN-NPQLQDQIRTMMPQLLAQLQNPEMQQMM 388
S+ + N+ ++ L + + + + N + ++D +R+ + + ++ N E
Sbjct: 875 SSDFKNNEIELLHDQIRITNAKLEKREKLINASKYIEDTLRSEIQEAAEKVSNLEFSNFN 934
Query: 389 SNPQALNALLQIQQGMEQLRTAAPSLVN 416
+ N LQ+ + +EQ T A LVN
Sbjct: 935 LKEENSNMQLQLMKALEQRNTGAKQLVN 962
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 29.9 bits (64), Expect = 0.90
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 152 VQQMMNDPE---NMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTME 197
++ +++ PE N++ L+ N + + S NP++ L PE+L Q ++
Sbjct: 17 IEAILDKPEDEINLKELLEENGVLDECKSHNPKLLEYLCKPEVLSQLID 65
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 29.9 bits (64), Expect = 0.90
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Query: 147 LDNPLVQQMMNDPENMRSLITSNPQMQDLMSRN-PEISHMLNNPELLRQTMELARNPAML 205
L+ P + + R+ + P + + P++ ++NNP ++ L ++ A L
Sbjct: 198 LNQPSDSSATSGADQARTSAGAAPDLGSIFGGGMPDLGSLMNNPAVMNMARNLMQSGA-L 256
Query: 206 QELMRSHDRA--LSNLESIPGGYNALQRMYRDIQEPMLNVASSMAGNPFSGLVDNSDGTN 263
+M + A N +S GG L + + Q + N+A + N +G DN++ N
Sbjct: 257 NNIMNDPNIANMARNFQS-GGGMPDLSSLANNPQ--LQNLARNFMNNNNNGNTDNNNQGN 313
Query: 264 P 264
P
Sbjct: 314 P 314
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 310 GMQSLLQQMSENPRLVQSMLSAPYTNSMLQALSADPEMASQLINQNP 356
G L+QQ+SEN S S +S+ LS+ AS + QNP
Sbjct: 653 GFNGLVQQVSENNTNAYSATSNSQLSSIFSNLSSSISDASSNVLQNP 699
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 305 LINTPGMQSLLQQMSENPRLVQSMLSAPYTNSMLQALSA 343
++ P MQ++L Q ENP + + P S ++ L A
Sbjct: 546 ILQDPAMQAILGQARENPAALMEHMKNPTVKSKIEKLIA 584
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 143 LRQVLDNPLVQQMMNDPENMRSLITSNPQMQ 173
LR ++D+P + ++N+PE +++LI P+ Q
Sbjct: 1169 LRSIVDSPRKKIIVNNPEILQALIKLTPRNQ 1199
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.9 bits (59), Expect = 3.6
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 167 TSNPQMQDLMS---RNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESIP 223
+SNP +S R E + N L + T LAR P +L+ +++ D + + IP
Sbjct: 733 SSNPAFAKFVSDVERLKESRKLELNGYLTKPTTRLARYPLLLEAVLKYTDEGNPDKQDIP 792
Query: 224 GGYNALQRMYRDIQEPMLNVASSMAGNPFS 253
N ++ LNV S A N F+
Sbjct: 793 KVINIVRGFL-----SRLNVESGKAENKFN 817
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 27.5 bits (58), Expect = 4.8
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 126 MDLQARMQQELLSNPDMLRQVLDNPLVQQMM-NDPENMRSLITSNPQMQDLM-SRNPE-- 181
++LQAR+QQ N DM ++L ++++ + ND + ++ I +++ L+ S E
Sbjct: 439 LELQARIQQLERRNEDMYNKLLAEEIIRRKLHNDIQELKGNIRVFCRVRPLLPSEESEYC 498
Query: 182 ISHMLNNP--ELLRQTMELARNPAMLQELMRSHDR 214
I+ +L P + L + + P + L ++DR
Sbjct: 499 IADVLQFPDKDALEPQKLILKGPNVESSLGHTYDR 533
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 27.5 bits (58), Expect = 4.8
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 126 MDLQARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHM 185
++L Q+L +N ++LR + ++Q M+++ ++ RSLI Q L S + +
Sbjct: 127 LELAKLSAQQLQTNVNVLRSQNNPEILQDMISETKDCRSLIAE----QLLQS-----ASL 177
Query: 186 LNNPELLRQTMELARNPAMLQELMRSHDRALSN 218
LN + + +A+N + L + R+H +L+N
Sbjct: 178 LN--DFQNDSDRIAKNHSSLIDTSRAHRVSLTN 208
>SPAC23C4.09c |||DNA-binding TFAR19-related
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 131
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 129 QARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNN 188
Q +Q E+ N +L Q+L++P ++ + + ++ M++ +ISH ++
Sbjct: 37 QQEVQDEMRQN--LLSQILEHPARDRLRRIALVRKDRAEAVEELLLRMAKTGQISHKISE 94
Query: 189 PELL 192
PEL+
Sbjct: 95 PELI 98
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 148 DNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQE 207
D+PL + ++R + +PQ+ D +R +S L++ L AR P
Sbjct: 244 DSPLYYRRATIASDLRPSVYQHPQLYDF-NRPESLSGQLDDESL-------ARMPYSPNA 295
Query: 208 LMRSHDRALSNLESIPGGY 226
+ R++ ++ ESIP GY
Sbjct: 296 VSRNYAMNMTLPESIPEGY 314
>SPAC16A10.03c |||zinc finger protein Pep5/Vps11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/31 (35%), Positives = 23/31 (74%)
Query: 135 ELLSNPDMLRQVLDNPLVQQMMNDPENMRSL 165
+LL + L++ D+ L+QQ+++DPE +++L
Sbjct: 654 DLLYSHLSLKEGQDDSLIQQIISDPETVKTL 684
>SPBC31E1.03 |hub1|ubl4|ubiquitin-like protein modifier
Hub1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 73
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/56 (21%), Positives = 30/56 (53%)
Query: 23 QVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHL 78
+V+ D + K++++++ T+P ++ L + D TL + I DG+++ +
Sbjct: 15 RVKCMPDDTVGDFKKLVAAQTGTDPRRIVLKKWHSVFKDNITLADYEIHDGMSLEM 70
>SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 133 QQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELL 192
QQ+ L+N + +V++N Q + + + L P ++ R+ S M +NP+
Sbjct: 198 QQDFLNNSTCVDKVMENRYTMQFLTNAGLKKILELVGPGEIVVVFRSSHFSTMYSNPDSF 257
Query: 193 RQ 194
Q
Sbjct: 258 AQ 259
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.128 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,716,680
Number of Sequences: 5004
Number of extensions: 57925
Number of successful extensions: 259
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 226
Number of HSP's gapped (non-prelim): 40
length of query: 523
length of database: 2,362,478
effective HSP length: 76
effective length of query: 447
effective length of database: 1,982,174
effective search space: 886031778
effective search space used: 886031778
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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