GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001551-TA|BGIBMGA001551-PA|IPR000626|Ubiquitin,
IPR006636|Heat shock chaperonin-binding,
IPR000449|Ubiquitin-associated, IPR008927|6-phosphogluconate
dehydrogenase, C-terminal-like, IPR009060|UBA-like
         (523 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     46   2e-06
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          27   1.2  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     26   2.8  
AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450 pr...    25   6.5  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin
          protein.
          Length = 229

 Score = 46.0 bits (104), Expect = 2e-06
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 24 VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
          +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72



 Score = 46.0 bits (104), Expect = 2e-06
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 24  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148



 Score = 46.0 bits (104), Expect = 2e-06
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 24  VEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIK 81
           +E+E    I+ +K  +  K    P+Q  LIFAGK + D  TL  +NI+   T+HLV++
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 3/93 (3%)

Query: 316 QQMSENPRLVQSM-LSAPYTNSMLQALSADPEMASQLINQNPMFANNPQLQDQIRTMMPQ 374
           QQ   + +L Q + +  P   S  Q  ++       L N  P+      L D   T  PQ
Sbjct: 144 QQQQSSQQLQQPLTILVPKNLSNSQGENSVTYTLDDLSNTVPVNTQYNALNDNYVTS-PQ 202

Query: 375 LLAQLQNPEMQQMMSNPQALNALLQIQQGMEQL 407
             +Q+ + ++QQ    P  L+  LQ QQ  +QL
Sbjct: 203 P-SQVTSRQLQQQQLQPNQLHQQLQQQQQQQQL 234



 Score = 25.8 bits (54), Expect = 2.8
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 356 PMFANNPQLQDQIRTMMPQLLAQLQNPEMQQMMSNPQALNALL 398
           P    + QLQ Q +    QL  QLQ  + QQ +S+P  + A L
Sbjct: 203 PSQVTSRQLQQQ-QLQPNQLHQQLQQQQQQQQLSSPCYMEATL 244


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 347 MASQLINQNPMFANNPQLQDQIRTMMPQLLAQLQNPEMQQMMSNPQALNALL 398
           + + L+ +   F N+  + + I+ ++  L+  LQN +++   SN Q L +++
Sbjct: 398 LCNVLLTKTSQFRNDEDIAENIQNLVALLIEGLQN-KLKIYRSNEQILKSMI 448


>AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450
           protein.
          Length = 69

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 311 MQSLLQQMSENPRLVQSMLSAPYTNSML-QALSADPEMA 348
           +Q +L + S +PR VQ   + PY + ++ ++L   P +A
Sbjct: 8   LQEVLDRSSSDPRSVQDYQNLPYLDRVIKESLRLYPPVA 46


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.128    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,565
Number of Sequences: 2123
Number of extensions: 12417
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 7
length of query: 523
length of database: 516,269
effective HSP length: 67
effective length of query: 456
effective length of database: 374,028
effective search space: 170556768
effective search space used: 170556768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)