Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001550-TA|BGIBMGA001550-PA|IPR000719|Protein kinase,
IPR011009|Protein kinase-like, IPR001245|Tyrosine protein kinase,
IPR002290|Serine/threonine protein kinase
         (338 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    74   2e-15
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    64   1e-12
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                59   5e-11
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    55   8e-10
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    49   7e-08
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    49   7e-08
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    44   2e-06
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          25   0.94 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.6  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   2.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.8  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   5.0  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   5.0  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   8.7  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 74.1 bits (174), Expect = 2e-15
 Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 16/200 (8%)

Query: 14  LGEGQFATVYKAK-----DAKTDKIVAVKKIKIGSRLEAQDGINRTALREIKLLQELQHI 68
           +G G+F  V + K     D +T+  VA+K +K GS  +A++      L E  ++ + +H 
Sbjct: 639 IGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDF----LTEASIMGQFEHP 694

Query: 69  NLIGLLDVFGQKSNVSLVFDFMDT-DLEIIIKDNTIVLTPANVKAYMIMTLKGLEYLHQN 127
           N+I L  V  + + V ++ +FM+   L+  ++ N        +   +     G++YL + 
Sbjct: 695 NVIFLQGVVTKSNPVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEM 754

Query: 128 WILHRDLKPNTLLINREGILKIGDFGLAKAFGSPTR----INTHQVVTRWYRAPELLFGA 183
             +HRDL    +L+N   + KI DFGL++   S T         ++  RW  APE +   
Sbjct: 755 NYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRW-TAPEAI-AF 812

Query: 184 RQYGTGVDMWAVGCILAELL 203
           R++ +  D+W++G +  E++
Sbjct: 813 RKFTSASDVWSMGIVCWEVM 832


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 64.5 bits (150), Expect = 1e-12
 Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 7/200 (3%)

Query: 14  LGEGQFATVYKAKDA-KTDKIVAVKKIKIGSRLEAQDGINRTALREIKLLQELQHINLIG 72
           LG G F  V   + A  + +  A+K++K    +E +    +  + E +++ E     ++ 
Sbjct: 373 LGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQ--QQHIMSEKRIMGEADCDFVVK 430

Query: 73  LLDVFGQKSNVSLVFDF-MDTDLEIIIKDNTIVLTPANVKAYMIMTLKGLEYLHQNWILH 131
           L   F  +  + ++ +  +  +L  +++D          + Y    ++  +YLH   I++
Sbjct: 431 LFKTFKDRKYLYMLMEACLGGELWTVLRDKGH-FDDGTTRFYTACVVEAFDYLHSRNIIY 489

Query: 132 RDLKPNTLLINREGILKIGDFGLAKAFGSPTRINTHQVVTRWYRAPELLFGARQYGTGVD 191
           RDLKP  LL++ +G +K+ DFG AK      +  T    T  Y APE++   + +    D
Sbjct: 490 RDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTF-CGTPEYVAPEVILN-KGHDISAD 547

Query: 192 MWAVGCILAELLLRVPFLPG 211
            W++G ++ ELL   P   G
Sbjct: 548 YWSLGVLMFELLTGTPPFTG 567


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 59.3 bits (137), Expect = 5e-11
 Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 17/198 (8%)

Query: 13  FLGEGQFATVYKAKDAKTDKIVAVKKIKIGSRLEAQDGINRTALREIKLLQELQHINLIG 72
           FLG G F  VYKA   K +++ A    KI   ++ +   N   L   K    L+H N++ 
Sbjct: 72  FLGSGGFGIVYKAL-YKGEQVAA----KI---IQTEKYSNM--LNSEKHASFLKHSNIVK 121

Query: 73  LLDVFGQKSNVSLV-FDFMDTDLEIIIKDNTIVLTPANVKAYMIMTLKGLEYLHQNWILH 131
           +L +  Q +++SL+  +   T L+  + D  I++    +     +T   L++ H   I+H
Sbjct: 122 VL-MIEQGASLSLITMELCGTTLQNRL-DEAILIKNERICILKSITC-ALQFCHNAGIVH 178

Query: 132 RDLKPNTLLINREGILKIGDFGLAKAFGSPTRINTHQVVTRWYRAPELLFGARQYGTGVD 191
            D+KP  +L+++ G  K+ DFG +   G+P  I+     T  Y APE++   R      D
Sbjct: 179 ADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKF-YGTPGYTAPEVIKQNRP-TPAAD 236

Query: 192 MWAVGCILAELLLR-VPF 208
           ++++G +  ++L R +PF
Sbjct: 237 IYSLGIVAWQMLFRKLPF 254


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 55.2 bits (127), Expect = 8e-10
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 118 LKGLEYLHQNWILHRDLKPNTLLI---NREGILKIGDFGLAKAFGSPTRINTHQVVTRWY 174
           L+ + + H N ++HRDLKP  LL+    +   +K+ DFGLA       +       T  Y
Sbjct: 19  LESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGTPGY 78

Query: 175 RAPELLFGARQYGTGVDMWAVGCILAELLLRVP 207
            +PE+L     YG  VD+WA G IL  LL+  P
Sbjct: 79  LSPEVL-KKEPYGKPVDIWACGVILYILLVGYP 110


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 48.8 bits (111), Expect = 7e-08
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 8/122 (6%)

Query: 77  FGQKSNVSLVFDFMDTDLEIIIKDNTIVLTPANVKAYMIMTLKGLEYLHQNWILHRDLKP 136
           FG  S V L+ D +  DL   I+     L    +    +  L+G+ YLH   ++HRD+K 
Sbjct: 669 FGFGSAVLLISDRLSRDLYCGIRAGLSWLERIQIA---LDVLEGIRYLHSQGLVHRDVKL 725

Query: 137 NTLLINREGILKIGDFGLAKAFGSPTRINTHQVVTRWYRAPELLFGARQYGTGVDMWAVG 196
             +L++ E   K+ DFG      +   +    V T  + APELL G   Y + VD++A G
Sbjct: 726 KNVLLDIENRAKLTDFGFCI---TEVMMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFG 780

Query: 197 CI 198
            +
Sbjct: 781 IL 782



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/30 (26%), Positives = 19/30 (63%)

Query: 5   TLRYEKIDFLGEGQFATVYKAKDAKTDKIV 34
           ++  +++ +LG GQ+ + +     KTD+I+
Sbjct: 254 SVEVDQLSWLGSGQYISDFVGSCRKTDQIL 283


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 48.8 bits (111), Expect = 7e-08
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 8/122 (6%)

Query: 77  FGQKSNVSLVFDFMDTDLEIIIKDNTIVLTPANVKAYMIMTLKGLEYLHQNWILHRDLKP 136
           FG  S V L+ D +  DL   I+     L    +    +  L+G+ YLH   ++HRD+K 
Sbjct: 707 FGFGSAVLLISDRLSRDLYCGIRAGLSWLERIQIA---LDVLEGIRYLHSQGLVHRDVKL 763

Query: 137 NTLLINREGILKIGDFGLAKAFGSPTRINTHQVVTRWYRAPELLFGARQYGTGVDMWAVG 196
             +L++ E   K+ DFG      +   +    V T  + APELL G   Y + VD++A G
Sbjct: 764 KNVLLDIENRAKLTDFGFCI---TEVMMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFG 818

Query: 197 CI 198
            +
Sbjct: 819 IL 820



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/30 (26%), Positives = 19/30 (63%)

Query: 5   TLRYEKIDFLGEGQFATVYKAKDAKTDKIV 34
           ++  +++ +LG GQ+ + +     KTD+I+
Sbjct: 292 SVEVDQLSWLGSGQYISDFVGSCRKTDQIL 321


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 3/128 (2%)

Query: 30  TDKIVAVKKIKIGSRLEAQDGINRTALREIKLLQELQHINLIGLLDVFGQKSNVSLVFDF 89
           TD++ A+K +K    ++  D +  T + +  L    +   L+ L   F     +  V ++
Sbjct: 8   TDELYAIKILKKDIIIQ-DDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVMEY 66

Query: 90  MDT-DLEIIIKDNTIVLTPANVKAYMIMTLKGLEYLHQNWILHRDLKPNTLLINREGILK 148
           ++  DL   I+       P  V  Y      GL +LH   I++RDLK + +L++++G +K
Sbjct: 67  VNGGDLMYQIQQCGKFKEPVAV-FYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIK 125

Query: 149 IGDFGLAK 156
           I DFG+ K
Sbjct: 126 IADFGMCK 133


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 131 HRDLKPNTLLINREGILKIG 150
           H D +P+T L+ R+ +L++G
Sbjct: 123 HDDARPHTYLVTRQKLLELG 142


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 297 PSVGPKLPMPSNISKLEVEKPSLKRKLLDNIDGGSLAKRLQF 338
           P  GPK+P      +++  K S  +      DGG++ K++ +
Sbjct: 204 PEKGPKVPEKKKEDEIDEGKESKTKLSQWRKDGGTVKKKVNY 245


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 12  DFLGEGQFATVYKAKDAKTDKIVAVKKI 39
           D + E    ++  AKDAK   IVA+ KI
Sbjct: 228 DGVKEQTLQSIEMAKDAKVPIIVAINKI 255


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 293 SKPAPSVGPKLPMPSNISKLEVE 315
           ++P  SV PK P   NI+ L  E
Sbjct: 203 TEPVGSVRPKFPSMDNINGLSTE 225


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 189 GVDMWAVGCILAELLLRVPFLPG 211
           G DM  +GC+ A ++ R+  L G
Sbjct: 60  GADMSQLGCLKACVMKRIEMLKG 82


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 189 GVDMWAVGCILAELLLRVPFLPG 211
           G DM  +GC+ A ++ R+  L G
Sbjct: 60  GADMSQLGCLKACVMKRIEMLKG 82


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)

Query: 87  FDFMDTDLEIIIKDNTIVLTPANVK 111
           F++   ++EII+KD   +  P+ +K
Sbjct: 339 FEYGGNNIEIIVKDPETLQFPSGMK 363


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.139    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,871
Number of Sequences: 429
Number of extensions: 3968
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 16
length of query: 338
length of database: 140,377
effective HSP length: 58
effective length of query: 280
effective length of database: 115,495
effective search space: 32338600
effective search space used: 32338600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)