GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001550-TA|BGIBMGA001550-PA|IPR000719|Protein kinase,
IPR011009|Protein kinase-like, IPR001245|Tyrosine protein kinase,
IPR002290|Serine/threonine protein kinase
         (338 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    47   2e-07
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 47.2 bits (107), Expect = 2e-07
 Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 5/128 (3%)

Query: 79  QKSNVSLVFDFMDTDLEIIIKDNTIVLTPANVKAYMIMTLKGLEYLHQNWILHRDLKPNT 138
           + SN S  F     D   +  +N  ++ P ++ +       G+E+L +  ++HRDL    
Sbjct: 563 ESSNSSNYFANKTYDFHNMSFENDFIIQPKHLLSIARQVALGMEHLAKTRVVHRDLAARN 622

Query: 139 LLINREGILKIGDFGLAKAFGSPT---RINTHQVVTRWYRAPELLFGARQYGTGVDMWAV 195
           +L+     +K+ DFGL++         +    ++  RW     L    ++Y T  D+W+ 
Sbjct: 623 VLVCENHTVKVSDFGLSRDVYQDNVYCKNGGGKLPVRWMALESLTH--QRYTTYSDVWSF 680

Query: 196 GCILAELL 203
           G +L E++
Sbjct: 681 GVLLWEIV 688


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)

Query: 298  SVGPKLPMPSNISKLEVEKPSLKRKLL 324
            +V PK P P+ + K+E +KP  K K+L
Sbjct: 1038 TVVPK-PDPNAVQKIEEKKPEKKDKVL 1063


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)

Query: 298  SVGPKLPMPSNISKLEVEKPSLKRKLL 324
            +V PK P P+ + K+E +KP  K K+L
Sbjct: 1038 TVVPK-PDPNAVQKIEEKKPEKKDKVL 1063


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 283 TQALQMAYFSSKPAPSVGPKLPMPSNIS 310
           T  +   Y S  P  S  P LP+  NI+
Sbjct: 316 TSVMTELYPSPVPGHSTSPNLPLTHNIA 343


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 14/60 (23%), Positives = 23/60 (38%)

Query: 1   MEEPTLRYEKIDFLGEGQFATVYKAKDAKTDKIVAVKKIKIGSRLEAQDGINRTALREIK 60
           +EE  L+   +  L  G F  +   +  K      +K   I S L+  DG+    +   K
Sbjct: 540 LEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYRNIKNFNIPSILQFNDGLKNLEIHVTK 599


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.139    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,510
Number of Sequences: 317
Number of extensions: 3228
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 338
length of database: 114,650
effective HSP length: 57
effective length of query: 281
effective length of database: 96,581
effective search space: 27139261
effective search space used: 27139261
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)