Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001549-TA|BGIBMGA001549-PA|IPR000626|Ubiquitin
(153 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 309 6e-85
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 309 6e-85
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 237 4e-63
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 4e-39
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 131 2e-31
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 89 2e-18
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 61 5e-10
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 45 3e-05
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 40 0.001
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 40 0.001
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12) 36 0.011
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.011
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 34 0.059
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.078
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.10
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.24
SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.73
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 0.73
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 30 0.96
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 30 0.96
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 29 1.7
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 29 1.7
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 1.7
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_11064| Best HMM Match : U-box (HMM E-Value=5.2) 29 2.2
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 29 2.2
SB_10217| Best HMM Match : ubiquitin (HMM E-Value=1.6e-06) 28 2.9
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 28 3.9
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_43701| Best HMM Match : ubiquitin (HMM E-Value=0.003) 27 6.8
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 27 6.8
SB_45774| Best HMM Match : DUF1261 (HMM E-Value=4.4) 27 6.8
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 27 9.0
SB_50374| Best HMM Match : OTU (HMM E-Value=0.036) 27 9.0
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 309 bits (759), Expect = 6e-85
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 309 bits (759), Expect = 6e-85
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 309 bits (759), Expect = 6e-85
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 309 bits (759), Expect = 6e-85
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381
Score = 309 bits (759), Expect = 6e-85
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 425 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457
Score = 307 bits (754), Expect = 2e-84
Identities = 151/152 (99%), Positives = 151/152 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 501 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 309 bits (759), Expect = 6e-85
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 309 bits (759), Expect = 6e-85
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 309 bits (759), Expect = 6e-85
Identities = 152/153 (99%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 307 bits (754), Expect = 2e-84
Identities = 151/152 (99%), Positives = 151/152 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 237 bits (579), Expect = 4e-63
Identities = 118/147 (80%), Positives = 131/147 (89%), Gaps = 1/147 (0%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL+
Sbjct: 61 IQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLL 119
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVL 147
+ ++L D R+L+DYNI++ S LHL L
Sbjct: 120 YEEEELVDNRSLADYNIKQGSILHLFL 146
Score = 156 bits (378), Expect = 9e-39
Identities = 76/77 (98%), Positives = 76/77 (98%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 137 IQKESTLHLVLRLRGGM 153
IQKESTLHLVLRLRGGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 157 bits (381), Expect = 4e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 154 bits (373), Expect = 3e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 137 IQKESTLHLVLRLRGG 152
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 131 bits (317), Expect = 2e-31
Identities = 63/63 (100%), Positives = 63/63 (100%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 138
Query: 61 IQK 63
IQK
Sbjct: 139 IQK 141
Score = 128 bits (310), Expect = 2e-30
Identities = 63/67 (94%), Positives = 63/67 (94%)
Query: 73 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 134
Query: 133 SDYNIQK 139
SDYNIQK
Sbjct: 135 SDYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Query: 36 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Query: 112 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 60.9 bits (141), Expect = 5e-10
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 3 IFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
I V TLTG+ I + + P TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 62 QKESTLHLVLRLRGG 76
+TLHL++RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
Score = 58.4 bits (135), Expect = 2e-09
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 79 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 138 QKESTLHLVLRLRGG 152
+TLHL++RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLS 57
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 58 DYNIQKES 65
+YNI ++S
Sbjct: 127 EYNIDEKS 134
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLS 133
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 134 DYNIQKES 141
+YNI ++S
Sbjct: 127 EYNIDEKS 134
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 78 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 137 IQK 139
+++
Sbjct: 67 LKQ 69
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 2 QIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 61 IQK 63
+++
Sbjct: 67 LKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 135
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 136 NIQKESTLHLVLR 148
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 59
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 60 NIQKESTLHLVLR 72
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 62 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 120 IFAGKQLEDGRTLSDYNIQKES-TLHLVL 147
I K + +L +++ T +L L
Sbjct: 79 IIGKKMAKPNESLLQCKVRETGFTAYLYL 107
Score = 36.3 bits (80), Expect = 0.011
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
+G L++ + TIE ++ ++ DK G PP QR I G+ ++ N ES L
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWII-------GKKMAKPN---ESLLQ 93
Query: 69 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 107
+R G ++ L+G+ + L E +T++ K K Q
Sbjct: 94 CKVR-ETGFTAYLYLLSGRNVELTREDVETLKLQKQKTQ 131
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 34
M ++++TLTG L V P +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
Score = 34.3 bits (75), Expect = 0.045
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 110
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12)
Length = 533
Score = 36.3 bits (80), Expect = 0.011
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Query: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV-LRL 73
LE+ T+ N+K ++ G+P + Q + D L D+ K++ H L+L
Sbjct: 19 LEIASDKTVYNLKLICEEHFGVPVELQAIYLVDN---DDVELQDWACLKDAATHTFKLQL 75
Query: 74 RGGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
F L I LE+ + T+ N+K ++ G+P + Q + D L
Sbjct: 76 MESAAKFEVLLPNDDIECLEIASDKTVYNLKLICEEHFGVPVELQAIYLVD---NDDVEL 132
Query: 133 SDYNIQKESTLH 144
D+ K++ H
Sbjct: 133 QDWACLKDAATH 144
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.011
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 14/60 (23%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Score = 36.3 bits (80), Expect = 0.011
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 14/60 (23%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 33.9 bits (74), Expect = 0.059
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 4 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63
FV G+ ITL P + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 64 ESTLHLVLR 72
+TL + L+
Sbjct: 229 GATLQIELQ 237
Score = 30.7 bits (66), Expect = 0.55
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 80 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 139
FV G+ ITL + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 140 ESTLHLVLR 148
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 33.5 bits (73), Expect = 0.078
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 43 LIFAGKQLEDGRTLSDYNIQKESTLH--LVLRLRGGMQIFVKTLTGKTITLEVEAS---D 97
L +AG LED +D I TL L+ + + + +G+ + S
Sbjct: 27 LNYAGGVLEDDWIFADIGIPPGVTLRCELIQNTKSYLNVHC-AYSGEIVKFTEPMSLFDT 85
Query: 98 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 145
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
Score = 32.7 bits (71), Expect = 0.14
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 22 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 80
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L G F
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIR--LETWNGWADF 143
Query: 81 VKTLT-GK-TITLEVEASDTIENVKAKIQDK 109
+K T G+ T TL+ S + + + AK Q +
Sbjct: 144 LKAATKGQLTPTLKHMLSISEDPLVAKYQQR 174
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.10
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 35 GIPPDQQRLIFAGKQLEDGRTLSDYN 60
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
Score = 33.1 bits (72), Expect = 0.10
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 111 GIPPDQQRLIFAGKQLEDGRTLSDYN 136
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 63 KEST 66
+++T
Sbjct: 245 QKAT 248
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 79 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 139 KEST 142
+++T
Sbjct: 245 QKAT 248
>SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 31.1 bits (67), Expect = 0.42
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
L ++ + T+ +K I+ +EG +Q + F G QL D TL + S HL LR+
Sbjct: 22 LRIQLNLTVLRLKQLIEAQEGFGISEQEVHFQGNQLVDALTLGQQGVLDGS--HLDLRV 78
Score = 30.3 bits (65), Expect = 0.73
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
L ++ + T+ +K I+ +EG +Q + F G QL D TL + S HL LR+
Sbjct: 22 LRIQLNLTVLRLKQLIEAQEGFGISEQEVHFQGNQLVDALTLGQQGVLDGS--HLDLRV 78
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 0.73
Identities = 13/14 (92%), Positives = 14/14 (100%)
Query: 64 ESTLHLVLRLRGGM 77
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 0.73
Identities = 13/14 (92%), Positives = 14/14 (100%)
Query: 140 ESTLHLVLRLRGGM 153
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 0.73
Identities = 13/14 (92%), Positives = 14/14 (100%)
Query: 64 ESTLHLVLRLRGGM 77
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 0.73
Identities = 13/14 (92%), Positives = 14/14 (100%)
Query: 140 ESTLHLVLRLRGGM 153
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 29.9 bits (64), Expect = 0.96
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 23 IENVKAKIQDKEGIPPDQQ-----RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77
I+ +K +QD++ + +QQ R + E+ RTL+D N S + RL G +
Sbjct: 136 IDALKRALQDQDQVMEEQQDALTERQLEIESLTEELRTLTDQNTSTNSLSAEIRRLEGTL 195
Query: 78 QIFVK 82
+++K
Sbjct: 196 SVYIK 200
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 29.9 bits (64), Expect = 0.96
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
+ +L G I P +++A IP DQ L F + LEDGR Y +
Sbjct: 533 LNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLRFLWRDLEDGRRPDVYQM 589
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
+ +L G I +++A IP DQ L F + LEDGR Y +
Sbjct: 533 LNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLRFLWRDLEDGRRPDVYQM 589
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/65 (23%), Positives = 36/65 (55%)
Query: 74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133
R +Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T +
Sbjct: 711 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDT 770
Query: 134 DYNIQ 138
+ +Q
Sbjct: 771 EEKLQ 775
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/62 (22%), Positives = 35/62 (56%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
+Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T ++
Sbjct: 714 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEK 773
Query: 61 IQ 62
+Q
Sbjct: 774 LQ 775
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR---TLSDYNI 61
V + G+T + P +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 62 QKESTLHLVLRL 73
+T+ L++ L
Sbjct: 120 PPYATISLIVVL 131
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.1 bits (62), Expect = 1.7
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--NIQ 62
+K G+ ++ + +D ENV I+ PD ++ I G L+DG+T+ D + +
Sbjct: 510 LKGKLGRNLSRCILGNDETENV-GNIESS----PDSKKNILEGLDLQDGKTVEDLLSDYR 564
Query: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 111
+E L+ ++ G + L + L E S +++ ++DK G
Sbjct: 565 RELELYRQIKDENGTVSRIVNLEKQVNDLSGENS-SLKTTMGDVKDKVG 612
Score = 26.6 bits (56), Expect = 9.0
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 134
+K G+ ++ + +D ENV I+ PD ++ I G L+DG+T+ D
Sbjct: 510 LKGKLGRNLSRCILGNDETENV-GNIESS----PDSKKNILEGLDLQDGKTVED 558
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 86 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 10 GKTITLEVEPS-DTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
G T E+E + +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_11064| Best HMM Match : U-box (HMM E-Value=5.2)
Length = 257
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
ITLE + + + ++ +Q + +L +AGK+L+ G+ L D+ I K LV++
Sbjct: 164 ITLEFDNQEDLSGMQGSLQV---LDEGTAQLWWAGKELQRGKKLQDF-IGKNEKTKLVVK 219
Query: 73 LR 74
L+
Sbjct: 220 LQ 221
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 89 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
ITLE + + + ++ +Q + +L +AGK+L+ G+ L D+ I K LV++
Sbjct: 164 ITLEFDNQEDLSGMQGSLQV---LDEGTAQLWWAGKELQRGKKLQDF-IGKNEKTKLVVK 219
Query: 149 LR 150
L+
Sbjct: 220 LQ 221
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/65 (23%), Positives = 35/65 (53%)
Query: 74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 133
R +Q ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T +
Sbjct: 7 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDT 66
Query: 134 DYNIQ 138
+ +Q
Sbjct: 67 EEKLQ 71
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/62 (22%), Positives = 34/62 (54%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
+Q ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T ++
Sbjct: 10 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDTEEK 69
Query: 61 IQ 62
+Q
Sbjct: 70 LQ 71
>SB_10217| Best HMM Match : ubiquitin (HMM E-Value=1.6e-06)
Length = 479
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 22 TIENVKAKIQDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQK-ESTLHLV 70
T+E +K + D P QQRLI++G+ L D +T+ ++ + E +H V
Sbjct: 33 TVEKLKKHLSDVYPSKPASKQQRLIYSGQLLLDHQTIKEFLREPIEGMMHTV 84
Score = 28.3 bits (60), Expect = 2.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 98 TIENVKAKIQDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQK-ESTLHLV 146
T+E +K + D P QQRLI++G+ L D +T+ ++ + E +H V
Sbjct: 33 TVEKLKKHLSDVYPSKPASKQQRLIYSGQLLLDHQTIKEFLREPIEGMMHTV 84
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 84 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 127
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 27.5 bits (58), Expect = 5.1
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-GKTITLEVEASDTIENV 102
+ + + R L + ++ TLHLV LRG I +T + G++ V A I
Sbjct: 326 VVGSRHFDVARMLREVDVTGTITLHLVEPLRGFGAIGPRTASRGQSTEEPVNAEKKIGTG 385
Query: 103 KAKIQDKEGIPP 114
KA ++ K PP
Sbjct: 386 KATLRLKAKGPP 397
>SB_43701| Best HMM Match : ubiquitin (HMM E-Value=0.003)
Length = 227
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTL 67
+ +++ Q +P Q+LIF GK L + +TL I+K S +
Sbjct: 116 VSDIEQAAQQVTQVPQCSQKLIFKGKSLTNRNQTLESLGIKKGSRI 161
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 99 IENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTL 143
+ +++ Q +P Q+LIF GK L + +TL I+K S +
Sbjct: 116 VSDIEQAAQQVTQVPQCSQKLIFKGKSLTNRNQTLESLGIKKGSRI 161
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 27.1 bits (57), Expect = 6.8
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 23 IENVKAKIQDKEGIPPDQQ-----RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77
++ +K +QD++ + +QQ R + E+ RTL D N S + RL G +
Sbjct: 228 VDALKRALQDQDQVMEEQQDALTERQLGIESLTEELRTLRDQNTSTNSLSAEIRRLEGTL 287
Query: 78 QIFVK 82
++++
Sbjct: 288 SVYIE 292
>SB_45774| Best HMM Match : DUF1261 (HMM E-Value=4.4)
Length = 392
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 18 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
+P +++ + + K+ IP + R ++ K+ E + L +N KE+ + V
Sbjct: 308 KPIESVTEILQHLISKDSIPKEDLRKTWSNKKSEREKLLKQWNKAKETLAYWV 360
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 58 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 93
DY + KES L + RGG+ F T+ + L +
Sbjct: 108 DYKLDKESQHSLTITSRGGVSRFFPTIYKSSCALNI 143
>SB_50374| Best HMM Match : OTU (HMM E-Value=0.036)
Length = 348
Score = 26.6 bits (56), Expect = 9.0
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLI--FAGKQL--ED-GRTLSDYNIQKESTL 143
L++ A+ T+ ++ KI +PP QR++ F ++L ED G LS NI+ TL
Sbjct: 55 LDLTANSTVTELQEKIWLITDVPPHAQRVLTGFPPRELIFEDKGAKLSYVNIRSGDTL 112
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.135 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,557,973
Number of Sequences: 59808
Number of extensions: 162328
Number of successful extensions: 430
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 356
Number of HSP's gapped (non-prelim): 78
length of query: 153
length of database: 16,821,457
effective HSP length: 76
effective length of query: 77
effective length of database: 12,276,049
effective search space: 945255773
effective search space used: 945255773
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
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