Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001549-TA|BGIBMGA001549-PA|IPR000626|Ubiquitin
(153 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 302 7e-83
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 302 7e-83
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 302 7e-83
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 302 7e-83
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 302 7e-83
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 302 7e-83
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 302 7e-83
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 302 7e-83
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 302 7e-83
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 302 7e-83
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 302 7e-83
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 302 7e-83
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 295 1e-80
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 293 4e-80
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 289 7e-79
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 268 1e-72
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 248 1e-66
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 246 5e-66
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 153 7e-38
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 153 7e-38
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 153 7e-38
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 152 9e-38
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 152 9e-38
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 124 3e-29
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 120 4e-28
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 96 1e-20
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 96 1e-20
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 1e-20
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 81 4e-16
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 78 3e-15
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 68 3e-12
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 6e-12
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 56 8e-09
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 56 1e-08
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 3e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 4e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 4e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 4e-07
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 5e-07
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 5e-07
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 50 5e-07
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 9e-07
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 50 9e-07
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 49 1e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 49 1e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 49 1e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 49 1e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 49 1e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 48 2e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 3e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 5e-06
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 3e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 44 3e-05
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 42 1e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 42 2e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 6e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 7e-04
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.002
At4g05260.1 68417.m00795 ubiquitin family protein contains INTER... 38 0.003
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.005
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.005
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 37 0.005
At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam ... 36 0.009
At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam ... 36 0.009
At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam ... 36 0.009
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.009
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 36 0.009
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.037
At1g11970.1 68414.m01383 hypothetical protein 34 0.037
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.085
At3g21280.1 68416.m02689 ubiquitin-specific protease 7, putative... 32 0.15
At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 31 0.26
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.45
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.60
At1g51710.1 68414.m05827 ubiquitin-specific protease 6, putative... 29 1.0
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 29 1.0
At1g47680.1 68414.m05297 hypothetical protein 29 1.8
At5g12280.1 68418.m01444 hypothetical protein 28 2.4
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 27 4.2
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 5.6
At1g55160.1 68414.m06299 expressed protein 27 5.6
At4g22680.1 68417.m03273 myb family transcription factor (MYB85)... 26 9.7
At1g77870.1 68414.m09075 expressed protein similar to geranylger... 26 9.7
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 26 9.7
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 300 bits (736), Expect = 3e-82
Identities = 146/152 (96%), Positives = 151/152 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 300 bits (736), Expect = 3e-82
Identities = 146/152 (96%), Positives = 151/152 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 300 bits (736), Expect = 3e-82
Identities = 146/152 (96%), Positives = 151/152 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 215 bits (524), Expect = 1e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 110
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 381
Score = 215 bits (524), Expect = 1e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 110
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 215 bits (524), Expect = 1e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 110
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 381
Score = 215 bits (524), Expect = 1e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 110
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 215 bits (524), Expect = 1e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 110
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 300 bits (736), Expect = 3e-82
Identities = 146/152 (96%), Positives = 151/152 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 300 bits (736), Expect = 3e-82
Identities = 146/152 (96%), Positives = 151/152 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 300 bits (736), Expect = 3e-82
Identities = 146/152 (96%), Positives = 151/152 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 302 bits (741), Expect = 7e-83
Identities = 147/153 (96%), Positives = 152/153 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 300 bits (736), Expect = 3e-82
Identities = 146/152 (96%), Positives = 151/152 (99%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 295 bits (723), Expect = 1e-80
Identities = 146/153 (95%), Positives = 151/153 (98%), Gaps = 1/153 (0%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+D NIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGM 152
Score = 291 bits (715), Expect = 1e-79
Identities = 145/153 (94%), Positives = 150/153 (98%), Gaps = 1/153 (0%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLI
Sbjct: 136 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLI 195
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 196 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 228
Score = 246 bits (602), Expect = 5e-66
Identities = 121/129 (93%), Positives = 125/129 (96%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 212 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLI 271
Query: 121 FAGKQLEDG 129
FAGKQLE G
Sbjct: 272 FAGKQLEGG 280
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 293 bits (718), Expect = 4e-80
Identities = 143/152 (94%), Positives = 149/152 (98%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLI 196
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
FAGKQ EDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQHEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 283 bits (695), Expect = 3e-77
Identities = 136/153 (88%), Positives = 147/153 (96%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
+Q++STLHL+LR RGGMQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLI
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 289 bits (708), Expect = 7e-79
Identities = 140/153 (91%), Positives = 148/153 (96%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLI
Sbjct: 139 IQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLI 198
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRL GGM
Sbjct: 199 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGGM 231
Score = 271 bits (664), Expect = 2e-73
Identities = 136/153 (88%), Positives = 143/153 (93%), Gaps = 1/153 (0%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRL GGMQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLI
Sbjct: 215 IQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLI 274
Query: 121 FAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 152
FAG+QLEDG TL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 FAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 267 bits (655), Expect = 2e-72
Identities = 130/153 (84%), Positives = 142/153 (92%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQI KTLT KTIT++V SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQK+S LHL LRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLI
Sbjct: 63 IQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLI 122
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQL+DGRTL+DYNIQKESTLHLVLRLRGGM
Sbjct: 123 FAGKQLDDGRTLADYNIQKESTLHLVLRLRGGM 155
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 268 bits (657), Expect = 1e-72
Identities = 133/153 (86%), Positives = 144/153 (94%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLI
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLI 122
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
FAGKQLEDGRTL+DYNIQKESTLHLVLRL GGM
Sbjct: 123 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGGM 155
Score = 237 bits (579), Expect = 3e-63
Identities = 123/160 (76%), Positives = 137/160 (85%), Gaps = 7/160 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPD 115
IQKESTLHLVLRL GGMQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD
Sbjct: 139 IQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPD 198
Query: 116 QQRLIFAGKQL--EDGRTLSDYNIQKESTLHLVLRLRGGM 153
QRLIF G++L ED RTL+DY I+ STL L LRLRG M
Sbjct: 199 HQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDM 238
Score = 208 bits (507), Expect = 2e-54
Identities = 110/155 (70%), Positives = 122/155 (78%), Gaps = 6/155 (3%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSD 58
MQIFVKTLT K I LEVE DTIENVKA +QDKEGI P QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 59 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 118
Y+IQKESTLHLVL GMQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ
Sbjct: 379 YSIQKESTLHLVL----GMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQI 434
Query: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
L+F G QL+DGRTL DYNI+ ESTLHL +R GM
Sbjct: 435 LLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGM 469
Score = 208 bits (507), Expect = 2e-54
Identities = 111/157 (70%), Positives = 122/157 (77%), Gaps = 7/157 (4%)
Query: 1 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 53
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 54 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 113
RTL DYNIQK ST+H + RGGMQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIK 588
Query: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150
PDQQ LIF G+QLEDG TL DY+I K+STL+LVLRLR
Sbjct: 589 PDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
Score = 202 bits (492), Expect = 1e-52
Identities = 109/157 (69%), Positives = 123/157 (78%), Gaps = 7/157 (4%)
Query: 1 MQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55
M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 56 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--P 113
L+ YNIQK STL+LV R R GMQIFVKTLT K I LEVE+ DTIENVKA +QDKEGI
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQ 357
Query: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 150
P+ QRLIF GK+L+DG TL+DY+IQKESTLHLVL ++
Sbjct: 358 PNLQRLIFLGKELKDGCTLADYSIQKESTLHLVLGMQ 394
Score = 202 bits (492), Expect = 1e-52
Identities = 107/160 (66%), Positives = 119/160 (74%), Gaps = 7/160 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVK GK ITLEV SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 61 IQKESTLHLVLRLRGGMQIFVKTL-------TGKTITLEVEASDTIENVKAKIQDKEGIP 113
I+ ESTLHL +R GMQIFVKT T KTITLEVE+SDTI+NVK KIQ K GIP
Sbjct: 453 IRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIP 512
Query: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
D+QRLIF G+ L RTL DYNIQK ST+H + RGGM
Sbjct: 513 LDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGM 552
Score = 198 bits (482), Expect = 2e-51
Identities = 109/165 (66%), Positives = 124/165 (75%), Gaps = 12/165 (7%)
Query: 1 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 53
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 54 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-----TGKTITLEVEASDTIENVKAKIQD 108
RTL+DY I+ STL L LRLRG M IFVK L TG+ LEVE+SDTI+NVKAK+QD
Sbjct: 215 RTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQD 274
Query: 109 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
KE IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R GM
Sbjct: 275 KERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGM 319
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 248 bits (608), Expect = 1e-66
Identities = 119/152 (78%), Positives = 134/152 (88%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
+AGKQL D +T DYNI+ S LHLVL LRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 246 bits (602), Expect = 5e-66
Identities = 118/153 (77%), Positives = 134/153 (87%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
+AGKQL D +T DY I+ S LHLVL LRGG+
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 153
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 153 bits (370), Expect = 7e-38
Identities = 73/77 (94%), Positives = 77/77 (100%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 137 IQKESTLHLVLRLRGGM 153
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 152 bits (368), Expect = 1e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGM 77
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 153 bits (370), Expect = 7e-38
Identities = 73/77 (94%), Positives = 77/77 (100%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 137 IQKESTLHLVLRLRGGM 153
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 152 bits (368), Expect = 1e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGM 77
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 153 bits (370), Expect = 7e-38
Identities = 80/106 (75%), Positives = 85/106 (80%), Gaps = 4/106 (3%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106
IQKESTLHLVLRLRGG K KT T + T + VK +
Sbjct: 61 IQKESTLHLVLRLRGG----AKKRKKKTYTKPKKIKHTHKKVKLAV 102
Score = 152 bits (369), Expect = 9e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 137 IQKESTLHLVLRLRGG 152
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 152 bits (369), Expect = 9e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 137 IQKESTLHLVLRLRGG 152
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 152 bits (369), Expect = 9e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 137 IQKESTLHLVLRLRGG 152
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 2e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 124 bits (298), Expect = 3e-29
Identities = 73/158 (46%), Positives = 97/158 (61%), Gaps = 15/158 (9%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK------------ 48
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 49 -QLEDGRTLSDYNIQKESTLHLVLRLRGG--MQIFVKTLTGKTITLEVEASDTIENVKAK 105
++ D D I E T LVLRL M+IFV T+ KT LEV+ SDTI+ +K+
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRLGPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKSM 169
Query: 106 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 143
I D+ G P DQQ L G +L++ T+SDYNI+ ++ L
Sbjct: 170 IHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 73.3 bits (172), Expect = 6e-14
Identities = 51/120 (42%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 49 QLEDGRTLSDYNIQKESTLHLVLRLR-----GG-MQIFVKTLTGKTITLEVEASDTIENV 102
++ED D I E T LV+ L G M IF+KTLTG+T T EV+ SDTI +
Sbjct: 16 EVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGRTNTYEVKGSDTIREL 75
Query: 103 KAKIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSDYNIQKESTLHLVLRL 149
KAK ++KEGIP +QQRLIF G+ ++ D D I E T LVLRL
Sbjct: 76 KAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 31.9 bits (69), Expect = 0.20
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI------PPDQQRLIFAGKQLEDGR 54
M I +KTL GK I LEVE S ++K + + PD ++ + GR
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGR 60
Query: 55 TLSDYNIQKESTLHLV--------------LRLRGGMQIFVKTLTGKTITLEV-EASDTI 99
T + Y ++ T+ + RL +I +KT+ GK+I LEV ++SDTI
Sbjct: 61 T-NTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTI 119
Query: 100 E 100
+
Sbjct: 120 D 120
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 120 bits (289), Expect = 4e-28
Identities = 74/158 (46%), Positives = 94/158 (59%), Gaps = 16/158 (10%)
Query: 8 LTGKT-ITLEVEPSDTIE-NVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQK 63
+ GKT I LEV+ S T+ + + IPPD +++ D T+ + +
Sbjct: 1 MDGKTRINLEVDSSKTVNLKIDEDPTISQNIPPDILHGKVMHLSINTVDKNTMINLEVDS 60
Query: 64 ESTLHLVL--RLRGG----------MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 111
T+ L + GG M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+G
Sbjct: 61 SKTIDLNIGENPTGGYNGPDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQG 120
Query: 112 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
IP DQQRLIF GKQLEDG TL+DYNIQ +S LHL+ RL
Sbjct: 121 IPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
Score = 116 bits (278), Expect = 9e-27
Identities = 55/73 (75%), Positives = 62/73 (84%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 61 IQKESTLHLVLRL 73
IQ +S LHL+ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 95.9 bits (228), Expect = 1e-20
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 65
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 123
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
++LED ++D +S LHL++R
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLVR 184
Score = 54.4 bits (125), Expect = 3e-08
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 83 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 141
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 142 TLHLVLRL 149
LHLVL+L
Sbjct: 100 ILHLVLKL 107
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 63 KESTLHLVLR 72
+S LHL++R
Sbjct: 175 DDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 95.9 bits (228), Expect = 1e-20
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 65
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 123
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
++LED ++D +S LHL++R
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLVR 184
Score = 54.4 bits (125), Expect = 3e-08
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 83 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 141
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 142 TLHLVLRL 149
LHLVL+L
Sbjct: 100 ILHLVLKL 107
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 62
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 63 KESTLHLVLR 72
+S LHL++R
Sbjct: 175 DDSVLHLLVR 184
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 95.5 bits (227), Expect = 1e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 137 IQKESTLHLVLRLRGG 152
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 94.7 bits (225), Expect = 2e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 61 IQKESTLHLVLRLRGG 76
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 80.6 bits (190), Expect = 4e-16
Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 65
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFA 122
LHLV+RL I V+T+ GK L VE S + VK +I KE GIP D + L
Sbjct: 98 LLHLVIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLD 156
Query: 123 GKQLEDGRTLSDYNIQKESTLHLVL 147
G++L+D R ++D ++ +HL++
Sbjct: 157 GEELDDQRLITDLCQNGDNVIHLLI 181
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 83 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 141
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 142 TLHLVLRL 149
LHLV+RL
Sbjct: 98 LLHLVIRL 105
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 77.8 bits (183), Expect = 3e-15
Identities = 43/145 (29%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Query: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 65
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAG 123
LHLVL+L + + V T GK V+ + +K +I ++ +G P D Q ++F G
Sbjct: 100 VLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKG 159
Query: 124 KQLEDGRTLSDYNIQKESTLHLVLR 148
++L+D R + S +HL+++
Sbjct: 160 EKLDDNRIIDGICKDGNSVIHLLVK 184
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 83 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 141
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 142 TLHLVLRL 149
LHLVL+L
Sbjct: 100 VLHLVLKL 107
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 67.7 bits (158), Expect = 3e-12
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 5/132 (3%)
Query: 20 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 79
++++E +K + D + + Q+ + + + E+ R+LS S RL QI
Sbjct: 42 AESLEMLKKQEIDADHMAASAQQTLISWRSGENSRSLSSSGECSSSNRPESTRL----QI 97
Query: 80 FVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 138
FV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+
Sbjct: 98 FVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIE 157
Query: 139 KESTLHLVLRLR 150
++++L LV R++
Sbjct: 158 QDASLQLVARMQ 169
Score = 62.9 bits (146), Expect = 9e-11
Identities = 30/75 (40%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 1 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
+QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 95 LQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 60 NIQKESTLHLVLRLR 74
+I+++++L LV R++
Sbjct: 155 SIEQDASLQLVARMQ 169
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 61 IQKESTLHLVLR 72
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 137 IQKESTLHLVLR 148
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative
similar to DNA repair by nucleotide excision (NER)
RAD23 protein, isoform I GI:1914683 from [Daucus
carota]
Length = 378
Score = 56.4 bits (130), Expect = 8e-09
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 59 YNIQKESTLHLVL 71
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
Score = 53.2 bits (122), Expect = 7e-08
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 135 YNIQKESTLHLVL 147
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity
to SP|P13117 Ubiquitin. {Neurospora crassa}; contains
Pfam profile PF00240: Ubiquitin family
Length = 415
Score = 55.6 bits (128), Expect = 1e-08
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 1 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 60 NIQKESTLHLVLRLRGGMQIFVKTLTG 86
Q ++T++LVL LRGG F L G
Sbjct: 67 --QPDATVNLVLSLRGGKGGFGSLLRG 91
Score = 53.2 bits (122), Expect = 7e-08
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 77 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 136 NIQKESTLHLVLRLRGG 152
Q ++T++LVL LRGG
Sbjct: 67 --QPDATVNLVLSLRGG 81
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 3e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 141 STLHLV 146
T+H+V
Sbjct: 82 HTIHMV 87
Score = 50.4 bits (115), Expect = 5e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 65 STLHLV 70
T+H+V
Sbjct: 82 HTIHMV 87
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 4e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 57
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 58 DYNIQKESTLHLVLRLRGG 76
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
Score = 50.8 bits (116), Expect = 4e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 133
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 134 DYNIQKESTLHLVLRLRGG 152
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 4e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 137 IQKESTLHL 145
I ES L L
Sbjct: 61 ILFESRLLL 69
Score = 50.0 bits (114), Expect = 7e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 61 IQKESTLHL 69
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 4e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 141 STLHLV 146
T+H+V
Sbjct: 82 HTVHMV 87
Score = 50.0 bits (114), Expect = 7e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 65 STLHLV 70
T+H+V
Sbjct: 82 HTVHMV 87
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 50.4 bits (115), Expect = 5e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 57
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 58 DYNIQKESTLHLVL 71
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 47.2 bits (107), Expect = 5e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 133
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 134 DYNIQKESTLHLVL 147
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 50.4 bits (115), Expect = 5e-07
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 57
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 58 DYNIQKESTLHLVL 71
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 47.2 bits (107), Expect = 5e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 133
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 134 DYNIQKESTLHLVL 147
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 50.4 bits (115), Expect = 5e-07
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 71 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDG 129
L RG M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D
Sbjct: 655 LPTRGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDE 714
Query: 130 RTLSDYNIQKESTLHLV 146
++L+ N+Q S +HL+
Sbjct: 715 KSLAAQNVQPNSLVHLI 731
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 59
M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 661 MKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQ 720
Query: 60 NIQKESTLHLV 70
N+Q S +HL+
Sbjct: 721 NVQPNSLVHLI 731
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 9e-07
Identities = 22/71 (30%), Positives = 45/71 (63%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 137 IQKESTLHLVL 147
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/71 (30%), Positives = 44/71 (61%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 61 IQKESTLHLVL 71
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 49.6 bits (113), Expect = 9e-07
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 49 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 103
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 104 AKIQDKEGIPP 114
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 38
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Query: 77 MQIFVKTLTGKTITLEVE-ASDTIE 100
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 1 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 60 NIQKESTLHLVLRLRGG 76
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
Score = 48.4 bits (110), Expect = 2e-06
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 77 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 136 NIQKESTLHLVLRLRGG 152
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative
similar to DNA repair by nucleotide excision (NER)
RAD23 protein, isoform II GI:1914685 from [Daucus
carota]; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 351
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 57
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 58 DYNIQKESTLHLVL 71
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 133
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 134 DYNIQKESTLHLVL 147
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative
similar to DNA repair by nucleotide excision (NER)
RAD23 protein, isoform II GI:1914685 from [Daucus
carota]; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 365
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 57
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 58 DYNIQKESTLHLVL 71
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 133
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 134 DYNIQKESTLHLVL 147
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative
similar to DNA repair by nucleotide excision (NER)
RAD23 protein, isoform II GI:1914685 from [Daucus
carota]; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 371
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 57
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 58 DYNIQKESTLHLVL 71
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 133
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 134 DYNIQKESTLHLVL 147
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative
similar to DNA repair by nucleotide excision (NER)
RAD23 protein, isoform II GI:1914685 from [Daucus
carota]
Length = 368
Score = 49.2 bits (112), Expect = 1e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 58 DYNIQKESTLHLVL 71
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 134 DYNIQKESTLHLVL 147
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.4 bits (110), Expect = 2e-06
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 135
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 136 NIQKESTLHLV 146
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 59
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 60 NIQKESTLHLV 70
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 137 IQKESTL 143
I ES L
Sbjct: 61 ILFESLL 67
Score = 47.2 bits (107), Expect = 5e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 61 IQKESTL 67
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.2 bits (107), Expect = 5e-06
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 137 IQKESTLHL 145
I + LHL
Sbjct: 61 ILQNPLLHL 69
Score = 46.4 bits (105), Expect = 8e-06
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 61 IQKESTLHL 69
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 61 IQKESTLHLVL----RLRGGMQIF 80
I S + L + + R +Q+F
Sbjct: 61 ILNHSRIQLSISSPDQSRNNIQVF 84
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 137 IQKESTLHL 145
I S + L
Sbjct: 61 ILNHSRIQL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 44.4 bits (100), Expect = 3e-05
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 59
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 91
N+Q S +HL LR + + + + L G+ +L
Sbjct: 560 NVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
Score = 43.6 bits (98), Expect = 6e-05
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 135
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 136 NIQKESTLHLV 146
N+Q S +HL+
Sbjct: 560 NVQPNSLVHLL 570
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 42.3 bits (95), Expect = 1e-04
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 70 VLR--LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 106
+ L G +K + + I+ V SD ++ K +
Sbjct: 604 MASQGLHQGEGPILKEASIRPISRTV-VSDKVDQRKPSV 641
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 86 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 145
GK+I L V T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 146 V 146
+
Sbjct: 604 M 604
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 57
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 58 DYNIQKESTLHLVL 71
+ +S + +++
Sbjct: 61 ANKVFDKSVIAIII 74
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 133
M+I VKTL G +EV+ +D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 134 DYNIQKESTLHLVL 147
+ +S + +++
Sbjct: 61 ANKVFDKSVIAIII 74
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.3 bits (90), Expect = 6e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 137 IQKESTLHL 145
I+ S + L
Sbjct: 62 IRHNSRILL 70
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 61 IQKESTLHL 69
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 137 IQKESTLHL 145
I+ S + L
Sbjct: 96 IRHNSRILL 104
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 61 IQKESTLHL 69
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05260.1 68417.m00795 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 259
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
M ++ +T G+ +E+ DT+ +K KI+ + IP Q L F G LED +
Sbjct: 1 MDVYFETQNGRKFCIELGYWDTVLEIKKKIEKYQRIPVPNQTLFF-GNALEDHLDIGQCK 59
Query: 137 IQKESTLHLVL 147
I + S H+VL
Sbjct: 60 ILQNS--HVVL 68
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
M ++ +T G+ +E+ DT+ +K KI+ + IP Q L F G LED +
Sbjct: 1 MDVYFETQNGRKFCIELGYWDTVLEIKKKIEKYQRIPVPNQTLFF-GNALEDHLDIGQCK 59
Query: 61 IQKESTLHLVL 71
I + S H+VL
Sbjct: 60 ILQNS--HVVL 68
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 123
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
Score = 36.7 bits (81), Expect = 0.007
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 47
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.005
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 123
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 47
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 86 GKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 144
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 145 LVLRLRGG 152
L LR RGG
Sbjct: 775 LSLRERGG 782
Score = 36.3 bits (80), Expect = 0.009
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 20 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 36.3 bits (80), Expect = 0.009
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSD 58
M I VK + T ++ +P++T+ +VK K+ P + QRL+ + LED ++L+D
Sbjct: 3 MYIRVKRMK-TTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61
Query: 59 YNIQKESTLHLVLR 72
++ ++ + L L+
Sbjct: 62 QKVENDAVVALTLK 75
Score = 33.1 bits (72), Expect = 0.085
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSD 134
M I VK + T ++ + ++T+ +VK K+ P + QRL+ + LED ++L+D
Sbjct: 3 MYIRVKRMK-TTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61
Query: 135 YNIQKESTLHLVLR 148
++ ++ + L L+
Sbjct: 62 QKVENDAVVALTLK 75
>At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 36.3 bits (80), Expect = 0.009
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSD 58
M I VK + T ++ +P++T+ +VK K+ P + QRL+ + LED ++L+D
Sbjct: 3 MYIRVKRMK-TTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61
Query: 59 YNIQKESTLHLVLR 72
++ ++ + L L+
Sbjct: 62 QKVENDAVVALTLK 75
Score = 33.1 bits (72), Expect = 0.085
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSD 134
M I VK + T ++ + ++T+ +VK K+ P + QRL+ + LED ++L+D
Sbjct: 3 MYIRVKRMK-TTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61
Query: 135 YNIQKESTLHLVLR 148
++ ++ + L L+
Sbjct: 62 QKVENDAVVALTLK 75
>At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 36.3 bits (80), Expect = 0.009
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSD 58
M I VK + T ++ +P++T+ +VK K+ P + QRL+ + LED ++L+D
Sbjct: 3 MYIRVKRMK-TTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61
Query: 59 YNIQKESTLHLVLR 72
++ ++ + L L+
Sbjct: 62 QKVENDAVVALTLK 75
Score = 33.1 bits (72), Expect = 0.085
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSD 134
M I VK + T ++ + ++T+ +VK K+ P + QRL+ + LED ++L+D
Sbjct: 3 MYIRVKRMK-TTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLAD 61
Query: 135 YNIQKESTLHLVLR 148
++ ++ + L L+
Sbjct: 62 QKVENDAVVALTLK 75
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.009
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
Score = 34.3 bits (75), Expect = 0.037
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 15 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 36.3 bits (80), Expect = 0.009
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 75 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
G ++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
Score = 34.7 bits (76), Expect = 0.028
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.037
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 34.3 bits (75), Expect = 0.037
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 39
L+ K I +E++P D IE +K I+++ GIP D
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIPSD 81
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.1 bits (72), Expect = 0.085
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 91 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 143
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
Score = 32.7 bits (71), Expect = 0.11
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 15 LEVEPSD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHL 69
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I KE++ L
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGI-KENSKIL 72
Query: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 104
R + GK+I E E + + VKA
Sbjct: 73 SCRQAAPEE-------GKSIMAEEERARRLSRVKA 100
>At3g21280.1 68416.m02689 ubiquitin-specific protease 7, putative
(UBP7) similar to GI:11993467
Length = 532
Score = 32.3 bits (70), Expect = 0.15
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 90 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
++E++ S KA++ D G+PP++Q+++ G L+D S ++ L ++
Sbjct: 70 SIEIDTSQPPFVFKAQLYDLSGVPPERQKIMVKGGLLKDDADWSTLGLKNGQKLMMM 126
Score = 31.9 bits (69), Expect = 0.20
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
++E++ S KA++ D G+PP++Q+++ G L+D S ++ L ++
Sbjct: 70 SIEIDTSQPPFVFKAQLYDLSGVPPERQKIMVKGGLLKDDADWSTLGLKNGQKLMMM 126
>At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar
to pre-mRNA splicing factor pre-mRNA splicing factor
prp1 (SP:Q12381) [Fission yeast]
Length = 1029
Score = 31.5 bits (68), Expect = 0.26
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 3 IFVKTLTGKTITLEVEP-SDTIENVKAKIQDKEGIPPDQQRL---------IFAGKQLED 52
+F+ GKT++++V P S TI + + +P R +F + D
Sbjct: 2 VFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDSD 61
Query: 53 GRTLSDYNIQKESTLHLVLRLRGGMQ 78
LSD + + ST+ + + L GGMQ
Sbjct: 62 SILLSDLGVSRFSTVIIHVLLLGGMQ 87
Score = 26.2 bits (55), Expect = 9.7
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 79 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRL---------IFAGKQLED 128
+F+ GKT++++V S TI + + +P R +F + D
Sbjct: 2 VFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDSD 61
Query: 129 GRTLSDYNIQKESTLHLVLRLRGGM 153
LSD + + ST+ + + L GGM
Sbjct: 62 SILLSDLGVSRFSTVIIHVLLLGGM 86
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 30.7 bits (66), Expect = 0.45
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 52 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 110
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.60
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Query: 20 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 66
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 67 LHLVLRL 73
+H+VLRL
Sbjct: 88 MHIVLRL 94
Score = 30.3 bits (65), Expect = 0.60
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Query: 96 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 142
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 143 LHLVLRL 149
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g51710.1 68414.m05827 ubiquitin-specific protease 6, putative
(UBP6) similar to GI:11993465
Length = 482
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 91 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
+E++ S KA++ D G+PP++Q+++ G L+D
Sbjct: 16 IEIDVSLPPYVFKAQLYDLTGVPPERQKIMVKGGLLKD 53
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 27 KAKIQDKEGIPPDQQRLIFAGKQLED 52
KA++ D G+PP++Q+++ G L+D
Sbjct: 28 KAQLYDLTGVPPERQKIMVKGGLLKD 53
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 29.5 bits (63), Expect = 1.0
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 11 KTITL-EVEPSD--TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 67
KTI + E EP D T+E+ AK + EG + I + DG D+ +Q+ S+
Sbjct: 100 KTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSF 159
Query: 68 HLVLRLRGGMQIFVKTLTGKTITLEVEASD--TIENVKAKIQDKEGIPPDQQR 118
+V GG GK + +EA D + K I+++E ++R
Sbjct: 160 QMVEGSMGG-----GVTRGKRGRVMMEAMDKAAAQRQKRMIKNRESAARSRER 207
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 18 EPSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 94 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 145
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 87 KTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137
K + + V++ S+ + ++K KI + P ++Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 11 KTITLEVEP-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
K + + V+ S+ + ++K KI + P ++Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 27.5 bits (58), Expect = 4.2
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 102
L+ AG LE + + +++ ++ L +V R G + VKT G + +V T+ +
Sbjct: 455 LVGAGLLLESNKKVYMHDMIRDMALWIVSEFRDGERYVVKTDAGLSQLPDVTDWTTVTKM 514
Query: 103 KAKIQDKEGIPPDQQ 117
+ + IP D +
Sbjct: 515 SLFNNEIKNIPDDPE 529
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 84 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 129
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 53
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At1g55160.1 68414.m06299 expressed protein
Length = 188
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 89 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
+T+E S T+ I+ +E IP QQR +F LE+ R ++ N +++
Sbjct: 116 VTVEKTLSSTVVAEPVVIKAREPIPEKQQRELFKW-MLEEKRKVNPKNAEEK 166
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 13 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
+T+E S T+ I+ +E IP QQR +F LE+ R ++ N +++
Sbjct: 116 VTVEKTLSSTVVAEPVVIKAREPIPEKQQRELFKW-MLEEKRKVNPKNAEEK 166
>At4g22680.1 68417.m03273 myb family transcription factor (MYB85)
similar to myb DNA-binding protein GI:1020155 from
[Arabidopsis thaliana]
Length = 266
Score = 26.2 bits (55), Expect = 9.7
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 51 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 110
E T++D N ++ HL+ + ++F + +T E SD+ V + D
Sbjct: 171 ESSSTVTDQNSSMDNENHLIDNIYDDDELFSYLWSDETTKDEASWSDSNFGVGGTLYDHN 230
Query: 111 GIPPDQQRLIFAGKQLEDGRTLSDY 135
D I++ +++ D + DY
Sbjct: 231 ISGADADFPIWSPERINDEKMFLDY 255
>At1g77870.1 68414.m09075 expressed protein similar to
geranylgeranylated protein ATGP4 [GI:4097567]
Length = 120
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 22 TIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSD 58
T+ ++K KI +DKE P ++ +LI GK LE+ +TLS+
Sbjct: 29 TVASLKEKIIAQWPKDKENAPKMINEVKLINGGKILENNKTLSE 72
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 98 TIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSD 134
T+ ++K KI +DKE P ++ +LI GK LE+ +TLS+
Sbjct: 29 TVASLKEKIIAQWPKDKENAPKMINEVKLINGGKILENNKTLSE 72
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 45 FAGKQLEDGRTLSDYNIQKESTLHLV---LRLRGGMQIFVKTLTGKTITLEVEASDTIEN 101
+ ++ +D + L + K H+ L GM I V + + +T A D ++
Sbjct: 16 YCDREFDDEKILVQHQKAKHFKCHVCHKKLSTASGMVIHVLQVHKENVTKVPNAKDGRDS 75
Query: 102 VKAKIQDKEGIPP 114
+I +GIPP
Sbjct: 76 TDIEIYGMQGIPP 88
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.135 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,304,625
Number of Sequences: 28952
Number of extensions: 122515
Number of successful extensions: 554
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 294
Number of HSP's gapped (non-prelim): 193
length of query: 153
length of database: 12,070,560
effective HSP length: 75
effective length of query: 78
effective length of database: 9,899,160
effective search space: 772134480
effective search space used: 772134480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 55 (26.2 bits)
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