GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001548-TA|BGIBMGA001548-PA|IPR000980|SH2 motif,
IPR001245|Tyrosine protein kinase, IPR000719|Protein kinase,
IPR008266|Tyrosine protein kinase, active site, IPR011009|Protein
kinase-like
         (514 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   183   3e-48
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                71   2e-14
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    56   9e-10
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    56   9e-10
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    56   9e-10
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    40   4e-05
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    38   2e-04
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   3.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   6.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   6.1  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  183 bits (446), Expect = 3e-48
 Identities = 110/303 (36%), Positives = 157/303 (51%), Gaps = 20/303 (6%)

Query: 192 AAGHFPHAYVAPAASTDQTDGTLQSQSFVDARWKIDERDLEIRENIGKGEFGDVMLGIL- 250
           A G    +YV P    D      +    +DA +      + I   IG GEFGDV  G L 
Sbjct: 600 AGGGGARSYVDPHTYEDPNQAVREFAREIDAGY------ITIEAIIGGGEFGDVCRGKLK 653

Query: 251 ---NGTQK--VAVKILKDR---EAASKFRAEASVMASLKHENLVRLLGLVFTSSGGTCLV 302
              +G  +  VA+K LK     +A + F  EAS+M   +H N++ L G+V T S    ++
Sbjct: 654 LPPDGRTEIDVAIKTLKPGSADKARNDFLTEASIMGQFEHPNVIFLQGVV-TKSNPVMII 712

Query: 303 TEHCAQGSLLDYLRSR-GRHYVTQLNQINFAFDACCGMEYLERQRVVHRDLAARNVLISA 361
           TE    GSL  +LR+  G+  V QL  +        GM+YL     VHRDLAARNVL++A
Sbjct: 713 TEFMENGSLDTFLRANDGKFQVLQL--VGMLRGIASGMQYLAEMNYVHRDLAARNVLVNA 770

Query: 362 EGTAKVADFGXXXXXXXXXXXXXXXXXQAKLPIKWTAPEALKYNKFSNKSDMWSFGILLW 421
               K+ADFG                   K+P++WTAPEA+ + KF++ SD+WS GI+ W
Sbjct: 771 ALVCKIADFGLSREIESATEGAYTTRG-GKIPVRWTAPEAIAFRKFTSASDVWSMGIVCW 829

Query: 422 EIYSFGRVPYPRIPLAEVVRHVERGYRMEAPEGCPPGPYELMRAAWHADPASRPTFLHMR 481
           E+ S+G  PY      +V++ +E+GYR+ AP  CP   Y+LM   W  +   RPTF ++ 
Sbjct: 830 EVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEAIYQLMLDCWQKERTHRPTFANLT 889

Query: 482 RNL 484
           + L
Sbjct: 890 QTL 892


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 70.9 bits (166), Expect = 2e-14
 Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 16/243 (6%)

Query: 237 IGKGEFGDVMLGILNGTQKVAVKILKDREAASKFRAEASVMASLKHENLVRLLGLVFTSS 296
           +G G FG V   +  G Q VA KI++  + ++   +E    + LKH N+V++L  +    
Sbjct: 73  LGSGGFGIVYKALYKGEQ-VAAKIIQTEKYSNMLNSEKHA-SFLKHSNIVKVL--MIEQG 128

Query: 297 GGTCLVTEHCAQGSLLDYLRSRGRHYVTQLNQINFAFDACCGMEYLERQRVVHRDLAARN 356
               L+T      +L + L       + +  +I       C +++     +VH D+  +N
Sbjct: 129 ASLSLITMELCGTTLQNRLDEA---ILIKNERICILKSITCALQFCHNAGIVHADVKPKN 185

Query: 357 VLISAEGTAKVADFGXXXXXXXXXXXXXXXXXQAKLPIKWTAPEALKYNKFSNKSDMWSF 416
           +L+S  G  K+ DFG                        +TAPE +K N+ +  +D++S 
Sbjct: 186 ILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPG-----YTAPEVIKQNRPTPAADIYSL 240

Query: 417 GILLWEIYSFGRVPYPRIPLAEVVRHVERGYRM--EAPEGCPPGPYE-LMRAAWHADPAS 473
           GI+ W++  F ++P+  +    ++    +G+R   +  +    G Y+ L +  W  +   
Sbjct: 241 GIVAWQML-FRKLPFAGLHSHTIIYLSAKGHRPIDDNIDDEFKGTYKTLYKQMWSQNITE 299

Query: 474 RPT 476
           RPT
Sbjct: 300 RPT 302


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 55.6 bits (128), Expect = 9e-10
 Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 326 LNQINFAFDACCGMEYLERQRVVHRDLAARNVLISAEGTAKVADFGXXXXXXXXXXXXXX 385
           L +I  A D   G+ YL  Q +VHRD+  +NVL+  E  AK+ DFG              
Sbjct: 697 LERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIVG 756

Query: 386 XXXQAKLPIKWTAPEALKYNKFSNKSDMWSFGILLWEIYS-FGRVPY--PRIPLAEVV-R 441
                  P+   APE L    + +  D+++FGIL W + +   R+PY   +    E++  
Sbjct: 757 T------PVH-MAPELLS-GHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWT 808

Query: 442 HVER-----GYRMEAPEGCPPGPYELMRAAWHADPASRPTFLHMRRNLADIRDHTPAQLQ 496
            V++     G R E         + LM   W  +P+ RP    +   L  I+        
Sbjct: 809 SVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSKS 868

Query: 497 LWELS 501
           L E+S
Sbjct: 869 LQEVS 873


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 55.6 bits (128), Expect = 9e-10
 Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 326 LNQINFAFDACCGMEYLERQRVVHRDLAARNVLISAEGTAKVADFGXXXXXXXXXXXXXX 385
           L +I  A D   G+ YL  Q +VHRD+  +NVL+  E  AK+ DFG              
Sbjct: 735 LERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGSIVG 794

Query: 386 XXXQAKLPIKWTAPEALKYNKFSNKSDMWSFGILLWEIYS-FGRVPY--PRIPLAEVV-R 441
                  P+   APE L    + +  D+++FGIL W + +   R+PY   +    E++  
Sbjct: 795 T------PVH-MAPELLS-GHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWT 846

Query: 442 HVER-----GYRMEAPEGCPPGPYELMRAAWHADPASRPTFLHMRRNLADIRDHTPAQLQ 496
            V++     G R E         + LM   W  +P+ RP    +   L  I+        
Sbjct: 847 SVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLLGAIVPVLESIQQKAKRSKS 906

Query: 497 LWELS 501
           L E+S
Sbjct: 907 LQEVS 911


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 55.6 bits (128), Expect = 9e-10
 Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 23/272 (8%)

Query: 229 RDLEIRENIGKGEFGDVMLGILNG--TQKVAVKILKDREAASK-----FRAEASVMASLK 281
           +DL     +G G FG V L  + G  ++  A+K +K  +           +E  +M    
Sbjct: 365 QDLRPLATLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQQQHIMSEKRIMGEAD 424

Query: 282 HENLVRLLGLVFTSSGGTCLVTEHCAQGSLLDYLRSRGRHYVTQLNQINFAFDACC--GM 339
            + +V+L    F       ++ E C  G L   LR +G H+     +    + AC     
Sbjct: 425 CDFVVKLFK-TFKDRKYLYMLMEACLGGELWTVLRDKG-HFDDGTTRF---YTACVVEAF 479

Query: 340 EYLERQRVVHRDLAARNVLISAEGTAKVADFGXXXXXXXXXXXXXXXXXQAKLPIKWTAP 399
           +YL  + +++RDL   N+L+ ++G  K+ DFG                       ++ AP
Sbjct: 480 DYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTP-----EYVAP 534

Query: 400 EALKYNKFSNKSDMWSFGILLWEIYSFGRVPYPRIPLAEVVRHVERGY-RMEAPEGCPPG 458
           E +        +D WS G+L++E+ + G  P+      +    + +G   +E P      
Sbjct: 535 EVILNKGHDISADYWSLGVLMFELLT-GTPPFTGGDPMKTYNIILKGIDAIEFPRSITRN 593

Query: 459 PYELMRAAWHADPASRPTFLHMRRNLADIRDH 490
              L++     +PA R    + +  +++I+ H
Sbjct: 594 ATALIKKLCRDNPAER--LGYQKGGISEIQKH 623


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 40.3 bits (90), Expect = 4e-05
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 10/133 (7%)

Query: 246 MLGILNGTQKV-AVKILK------DREAASKFRAEASVMASLKHENLVRLLGLVFTSSGG 298
           ML    GT ++ A+KILK      D +       +  +  S K   LV+L    F +   
Sbjct: 1   MLAERKGTDELYAIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSC-FQTMDR 59

Query: 299 TCLVTEHCAQGSLLDYLRSRGRHYVTQLNQINFAFDACCGMEYLERQRVVHRDLAARNVL 358
              V E+   G L+  ++  G+    +   + +A +   G+ +L  + +V+RDL   NVL
Sbjct: 60  LYFVMEYVNGGDLMYQIQQCGKF--KEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVL 117

Query: 359 ISAEGTAKVADFG 371
           +  +G  K+ADFG
Sbjct: 118 LDQDGHIKIADFG 130


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 37.9 bits (84), Expect = 2e-04
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 8/88 (9%)

Query: 347 VVHRDLAARNVLIS--AEGTA-KVADFGXXXXXXXXXXXXXXXXXQAKLPIKWTAPEALK 403
           VVHRDL   N+L++  A+G A K+ADFG                  A  P  + +PE LK
Sbjct: 30  VVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGF---AGTP-GYLSPEVLK 85

Query: 404 YNKFSNKSDMWSFGILLWEIYSFGRVPY 431
              +    D+W+ G++L+ I   G  P+
Sbjct: 86  KEPYGKPVDIWACGVILY-ILLVGYPPF 112


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 186 SVPSALAAGHFPHAYVAPAAST-DQTDGTLQSQSF 219
           S P+A+  GH PH +  P  +   Q +  LQ+  F
Sbjct: 452 SYPAAIQIGHTPHHHPHPPETPGPQVETILQNACF 486


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 14/49 (28%), Positives = 20/49 (40%)

Query: 294 TSSGGTCLVTEHCAQGSLLDYLRSRGRHYVTQLNQINFAFDACCGMEYL 342
           T++G  C        G+L   L   G  Y+T L Q +      CG+  L
Sbjct: 286 TAAGMMCQPVGTLIVGALAGLLSVLGYKYITPLIQKHLKIHDTCGVHNL 334


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 8   PAPAATVPSAMHTSQTAPAVTKGQSDVLVNSSVQNPPP 45
           PA   T  +   T+ T    T    +   N+S   PPP
Sbjct: 654 PATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPPP 691


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.134    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,497
Number of Sequences: 429
Number of extensions: 5874
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 10
length of query: 514
length of database: 140,377
effective HSP length: 61
effective length of query: 453
effective length of database: 114,208
effective search space: 51736224
effective search space used: 51736224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)