Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001547-TA|BGIBMGA001547-PA|IPR004273|Dynein heavy chain,
IPR010987|Glutathione S-transferase, C-terminal-like,
IPR011072|Protein kinase PKN/PRK1, effector
(1347 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 234 7e-62
SPAC24B11.05 |||pyrimidine 5'-nucleotidase |Schizosaccharomyces ... 36 0.029
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 34 0.12
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 34 0.16
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 33 0.21
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 32 0.63
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 31 1.1
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 31 1.1
SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces po... 31 1.4
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 31 1.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 30 1.9
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 30 1.9
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 30 2.5
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 29 3.3
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 29 3.3
SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces ... 29 4.4
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 29 4.4
SPAC9E9.15 |||CIA30 family protein|Schizosaccharomyces pombe|chr... 29 4.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 4.4
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 5.8
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 29 5.8
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 29 5.8
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 29 5.8
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 28 7.7
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 28 7.7
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 28 7.7
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 28 7.7
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 234 bits (572), Expect = 7e-62
Identities = 146/580 (25%), Positives = 280/580 (48%), Gaps = 9/580 (1%)
Query: 1 MGNPPAIVKVALESICLLLGENATDWKAIRAVILRENFINSIVSNFSTEDITDDVREKMR 60
+ PP +++ +E +C LLG +ATDWK ++ ++ R++FI I++ ++++ ++R K+
Sbjct: 3224 LSRPPMAIRITMEVVCKLLGFSATDWKNVQQLLKRDDFIPKILNYNLEKELSINLRRKIE 3283
Query: 61 TRYLSNPDYNFEKVNRASMACGPMVKWAIAQIEYADMLKRVEPLRNELQALEDQAQSNVT 120
Y SNP + F+ VNRAS ACGP++ W + Y+ +L+++EPL +E+ L+ + ++
Sbjct: 3284 QDYFSNPIFTFDSVNRASKACGPLLLWIKSICNYSKVLEKLEPLNSEVDRLKLEQKNAEE 3343
Query: 121 AGNEVRELIAQLEKSIASYKEEYAQLISQAQAIKTDLENVQAKVDRSIALLKSLVIERER 180
E L++ + +EEYA +IS+ +++ ++ V+ K+ RSI ++ L IER
Sbjct: 3344 CIQETIAACKDLDEKLLQLQEEYASMISEIHSMELQMDEVKCKMQRSIEVITDLSIERNE 3403
Query: 181 WESSSETFRSQMSTIVGDVLLSAAFIAYGGYFDQHYRQNLFTTWTNHLAAANIRYRADIA 240
W + +M +VG+ L+ A+F+ Y G D R L +++
Sbjct: 3404 WSGFLNLYPKRMWNLVGESLMEASFVVYAGNLDPSMRIFLRNKCEPIISSFGFPISKSAV 3463
Query: 241 RTEYLSNPDERLRWQANALPTDELCVENAIMLRRFNRYP-LIIDPSGQATEFIMREFKER 299
RT + + TD +EN +++ N+ P LIIDPS Q + + +K +
Sbjct: 3464 RTNIERCVQTSIESKYYKNLTD-YSLENIYIIQE-NKSPLLIIDPSSQILDILPSLYKGK 3521
Query: 300 KITKTSFLDDSFRKNLESALRFGNPLLVQDVENYDPILNPVLNRELRRTGGRVLITLGDQ 359
SF + SF+ ++ AL G+ ++++D E +D + P+L E G V T
Sbjct: 3522 ASDLISFSNKSFQNQIKLALLSGSAIIIKDAELWDVSIEPLLKPEFFTGSGEVQTTFAKD 3581
Query: 360 DIDLS-PSFVIFLSTRDPTVEFPPDMCSRVTFVNFTVTRSSLQSQCLHRVLKAERPDIDA 418
I ++ P +IF S E + VNFT++ S L++Q L V+ + P +
Sbjct: 3582 TITITLPLNIIFFSEVQSN-ELENKASKFMNVVNFTLSISLLETQMLKSVISVQEPGVFK 3640
Query: 419 KRSDLLKLQGEFHLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKKEADDIGQKVEE 478
++ + L+ ++R L++ LL+ L + I+ D ++ L+ LK++ + I E
Sbjct: 3641 QKDNCFTLKLSIERQIRSLQEQLLKTLCSSNENIVGTDEIVVLLKNLKEKHETIRLAYSE 3700
Query: 479 TDKVIAEIETVSQQYLPLSQACSSIYFTMDSLNQIHFLYQYSLKMFLDIFSSVLICPLLN 538
+ + +++ + ++Y ++ S+ + Y +S F +L L N
Sbjct: 3701 SQSINRKVDELIRRYKLSIKSFLSVVVVFQHFISLKKSYSFSFNFIWSTFHQMLNVVLEN 3760
Query: 539 GVTDYTARLKIITEELFAVVYERVARGMLHTDRLTFALLL 578
D+ + + +L R + DR+ F LL
Sbjct: 3761 RNQDFKSLIMDALRDLI----RRCFLYIFPEDRVLFLFLL 3796
Score = 93.1 bits (221), Expect = 2e-19
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 14/308 (4%)
Query: 718 DLASITETQLNATTPAILCSVPGYDASGRVDDMATELNKPLSSIAIGSAEGFNQAERAIN 777
D I + + P I+ + + + + N ++++GSAE + A+ +
Sbjct: 3892 DFLKIINDESESRMPTIVYLMENCEIDSLLQNAKIPQNIKKLTVSLGSAENESLADSYLK 3951
Query: 778 TACKTGRWVMLKNVHLAPVWLVQLEKKLHSLQPHPNFRLFLTTEINPKLPVNLLRAGRVL 837
A W+ + N+HL+ W +L K+ S H N R+ +EI+ +LP LL R +
Sbjct: 3952 LASTEPLWLFINNIHLSTPWAEKLPSKM-SNHLHKNSRIVCLSEIHNQLPHQLLCISRSI 4010
Query: 838 VFEPPPGIRANLLRTFVTVPAARMMKPPSERARLYFLLAWFHGIVQERLRYVPLGWAKYY 897
VF + NLL +P P R RL+F L+W H + E + W +
Sbjct: 4011 VFNKQTSFKNNLLNLLELLPTMTHTL-PHNRFRLFFFLSWLHATLAEIYCFTCSSWKEPC 4069
Query: 898 EFNESDLRVACDTLDTWIDATAMGRTNLPPEKVPWEALVTLLSQCIYGGKIDNLFDQRLL 957
F++SD T I + R N+ E+ W LL +YG K+ D L
Sbjct: 4070 YFDDSDF-----YFGTKILCNILYR-NVHLEEFSWGTFKDLLLNVVYGPKVSASSDFIAL 4123
Query: 958 QSFLSKLFTPKSFEADFALVANVDGATGNQRHITMPDGNRRDNFLKWIEELSDRQTPSWL 1017
L +L F+ + +N+ T N + I +P + + I +L D P WL
Sbjct: 4124 DKILKRLIA--QFKTQIS--SNI-LLTDNFKFI-LPYEITFSSAKEVIGQLPDEIPPGWL 4177
Query: 1018 GLPNNAEK 1025
+P N+++
Sbjct: 4178 DIPENSKR 4185
>SPAC24B11.05 |||pyrimidine 5'-nucleotidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 226
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 275 FNRYPLIIDPSGQATEFIMREFKERKITKTSFLDDSFRKNLESALRFGNPLLVQDVENYD 334
+N LI P + E +MRE K F+DDS+ N+ A FG VQ VE+ D
Sbjct: 140 YNAKDLIAKPMPEMYERVMREAGVTDKDKCIFVDDSY-GNILGAREFGWKYTVQLVEHGD 198
Query: 335 PILNP 339
P+ P
Sbjct: 199 PLPQP 203
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 34.3 bits (75), Expect = 0.12
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 54 DVREKMRTRYLSNPDYNFEKVNRASMACGPMVKWAIAQIEYADMLKRV--EPLRNELQ-A 110
D+R++ + R +S D + R M+ ++ + Q + +D ++V E + L +
Sbjct: 762 DLRKRTQERLISENDKLLAERERL-MSLVSDLQTFLNQQQLSDAARKVKFESEKESLSLS 820
Query: 111 LEDQAQSNVTAGNEVRELIAQLEKSIASYKEEYAQLISQAQAIKTD----LENVQAKVDR 166
L+ +SN N++ L LEKS Y L+ + Q++ D L+N Q +
Sbjct: 821 LQKLKESNEKMSNDLHSLQKSLEKSGIEYSSRIKTLMLEKQSLSEDNRKLLDNQQMMEIK 880
Query: 167 SIALLKSLVIERERWESSSETFRSQMST 194
L + +E++R+ + F Q +T
Sbjct: 881 LQELNGVIELEKQRFSTLEAKFTQQKNT 908
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 33.9 bits (74), Expect = 0.16
Identities = 11/77 (14%), Positives = 44/77 (57%)
Query: 96 DMLKRVEPLRNELQALEDQAQSNVTAGNEVRELIAQLEKSIASYKEEYAQLISQAQAIKT 155
D+ +E ++++ +E + + + ++R + QLE+ + +++++Y+++ + + +K
Sbjct: 252 DISGTIETIKSDCYKVESENKGLINEVMDMRNFVQQLEQELYAFEDDYSRIQNDEELLKV 311
Query: 156 DLENVQAKVDRSIALLK 172
+ ++ +R++ +K
Sbjct: 312 GMIHLNKSENRTVEEMK 328
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/103 (21%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 91 QIEYADMLKRVEPLRNELQALEDQAQSNVTAGNEVRELIAQLEKSIASYKEEYAQLISQA 150
+++ + KR+ L E + L+ + + EV L Q+E Y + +Q + +
Sbjct: 105 ELQKSQFEKRISILEKEKEDLQRKMEELTVESMEVVRLTRQVETLSTQYSIQRSQWVRED 164
Query: 151 QAIKTDLENVQAKVDRSIALLKSLVIERERWESSSETFRSQMS 193
+ K ++++++ ++S K+ WE ETF++Q+S
Sbjct: 165 EKKKKEIQDLKELYEKSEHGAKN-------WERERETFQNQVS 200
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 96 DMLKRVEPLRNELQALEDQAQSNVTAGNEVRELIAQLEKSIASYKEEYAQLI 147
D K+VE LR +LQ LE + S + + + + +LE I +E Y I
Sbjct: 489 DSKKQVEELRLQLQNLEKEHASTLVTLKQKSDKVFELELDIKDMRELYVSQI 540
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.9 bits (69), Expect = 0.63
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 89 IAQIEYADMLKRVEPLRNELQALEDQAQSNVTAGN--EVRELIAQLEKSIASYKEEYAQL 146
+A+ Y +++ RV+ +L E + V N RE + + KS +K+E L
Sbjct: 462 LAESTYKELMDRVQ--NKDLLCQEQARKLEVLDLNVKSSREQLQYVSKSNQEHKKEVEAL 519
Query: 147 ISQAQAIKTDLENVQAKVDRSIALLKSLVIERERWESSSETFRSQMSTIVGDV 199
Q T+LE+V+++ ++ L LV+E E+ ET ++++T+ D+
Sbjct: 520 QLQLVNSSTELESVKSENEK---LKNELVLEIEK-RKKYETNEAKITTVATDL 568
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 409 LKAERPDIDAKRSDLLKLQGEF-HLRLRQLEKSLLQALNDAKGKILDDDSVIATLETLKK 467
LKA+ DI ++ L + E L +K L + + + + +++L++
Sbjct: 69 LKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLER 128
Query: 468 EADDIGQKVEE-TD---KVIAEIETVSQ 491
E DD+ QK+EE TD KV AE++ V Q
Sbjct: 129 ERDDMEQKLEEMTDKYTKVKAELDEVHQ 156
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 123 NEVRELIAQLEKSIASYK--EEYAQLISQAQAIKTDLENVQAKVDRSIALLKSLVIERER 180
N+VR L+ QL K SY+ +E Q Q + + + + ++ SL+I +R
Sbjct: 90 NDVRHLLIQLAKIKQSYETPDELQQAAKQFYQLAS--KGIGLELALFYEEYGSLLIRMQR 147
Query: 181 WESSSETFRSQMS 193
W+ +SE F + +S
Sbjct: 148 WKEASEVFHAAVS 160
>SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 290 EFIMREFKERKITKTSFLDDSFRKNLE-----SALRFGNPLLVQDVENYDPILNP 339
EF EFK+ + LD F LE + FGN +V+D++ ++ + P
Sbjct: 108 EFATEEFKKDYFRMMNVLDPKFTNKLEIYPGNHDIGFGNHAIVKDIQRFESLFGP 162
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/104 (17%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 91 QIEYADMLKRVEPLRNELQALEDQAQSNVTAGNEVRELIAQLEKSIASYKEEYAQLISQA 150
QI+++D+ + +E R+E+++ + + +TA + + + + S+ ++ ++ L +
Sbjct: 677 QIKFSDLQESLEKCRSEIESFDQK----ITA---CLDDLQKAQLSLKQFERDHIPLKDEL 729
Query: 151 QAIKTDLENVQAKVDRSIALLKSLVIERERWESSSETFRSQMST 194
I + ++Q + +L+ +V+E E + +S++S+
Sbjct: 730 VTITGETTDLQESMHHKSRMLELVVLELHTLEQQANDLKSELSS 773
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/18 (66%), Positives = 16/18 (88%), Gaps = 2/18 (11%)
Query: 807 SLQPHPNFRLFLTTEINP 824
+++PHPNFRLFLT +NP
Sbjct: 2071 TIKPHPNFRLFLT--VNP 2086
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 100 RVEPLRNELQALEDQAQSNVTAGNEVRELIAQLEKSIASYKEEYAQLISQAQAIKTDLEN 159
++E L +++ E + A +RE LEK + K E L +++ ++ ++ +
Sbjct: 78 QIESLESKIGEQERDLNNEKLASETLREKTQLLEKENGALKVENGYLYEKSRKLEEEMAH 137
Query: 160 V-------QAKVDRSIALLKSLVIERERWESSSETFRSQMST 194
+ ++K + S KSL + + S ET + +M T
Sbjct: 138 LKKKCNVYKSKFEESSLRCKSLYSSNTKLKDSMETMKRRMET 179
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 123 NEVRELIAQLEKSIASYKEEYAQLISQAQAIKTDLENVQAKVDRSIALLKSLVIER 178
NEV+ I++L+K+ A + ++ Q ++ LEN + + ++ L+ ++ R
Sbjct: 243 NEVKNRISRLQKTFADLENQHHSFQQICQTLRKRLENDSSTTKQRLSKLEEIIRNR 298
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 1248 ENAQTEWSFSVTGLKLQGATVKGNRLLLTNTIMVDLPLTVLTWVRGPEPASNSHTLTLPV 1307
EN +T + V G + G++ + N +++DL + W P+P H++T V
Sbjct: 308 ENGKTVYPKEVIGPSIPGSSFF--IIHCPNELVIDLVIENHKWTNAPKPVCVIHSVTPEV 365
Query: 1308 YLN 1310
Y N
Sbjct: 366 YKN 368
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 99 KRVEPLRNELQALEDQAQSNVTAG-NEVRELIAQLEKSIASYKEEYAQLISQAQAIK--- 154
K +E +RNE +A + + + A E+ EL Q+EK+ + E+ +++ QA++
Sbjct: 119 KEIEEVRNEKEATQVKIHELLDAKWKEIAELKTQIEKNDQALSEKNHEVMVSNQALQMKD 178
Query: 155 TDLENVQ 161
T+L N++
Sbjct: 179 TNLTNLE 185
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 21 ENATDWKAIRAVILRENFINSIVSNFSTEDITDDVREKMRTRYL 64
ENA W A R ++L+E F FS D +RE +R+RYL
Sbjct: 617 ENAMQWNAQRELVLKEVF-----KRFSAL-APDAIRETLRSRYL 654
>SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 263
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 114 QAQSNVTAGNEVRELIAQLEKSIASYKEEYAQLISQAQAIKTDLENVQAKVDRSIALLKS 173
+A N GN ++E I+ EEY Q S ++K+ L +++ + S + L
Sbjct: 180 RALMNWPVGNRLQEYISFSHPKEREVDEEYIQNFSSDPSLKSSLNDLKRYISDSSSELAD 239
Query: 174 LVIERE 179
+V+ E
Sbjct: 240 VVLSSE 245
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/69 (20%), Positives = 36/69 (52%)
Query: 96 DMLKRVEPLRNELQALEDQAQSNVTAGNEVRELIAQLEKSIASYKEEYAQLISQAQAIKT 155
DM R + ++ E+ +++ S E++ + ++ IAS K E A++ + +K
Sbjct: 121 DMNSRFDAMQTEMSVMKNGIASIKGEMAEMKGEMTVMKNDIASIKGEMAEMKGEMAVMKN 180
Query: 156 DLENVQAKV 164
D+ +++ ++
Sbjct: 181 DIASIKGEM 189
>SPAC9E9.15 |||CIA30 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 1079 HQTAANWLQLLPKELPTLRRTVENIKDPLYRFFEREVAAGA 1119
++ N ++ +PK +P + N K L+ +E+E+A G+
Sbjct: 174 YELVLNSIRAIPKNVPFTTHKMSNEKQRLFDDYEKEIAGGS 214
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 4.4
Identities = 28/139 (20%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 401 QSQCLHRVLKAERPDIDAKRSDLLKLQGEFHLRLRQLEKSLLQALNDAKGKILDDDSVIA 460
QS + L ER D+ + SD+ K + + + L++ ++ D DS+
Sbjct: 1162 QSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIRSDLVRVNDELDTLKKDKDSLST 1221
Query: 461 TLETLKKEADDIGQKVEETDK-------VIAEIETVSQQYLPLSQAC-SSIYFTMDSLNQ 512
+ ++ DD+ ++ ++ + E+ T S+ +P+S+ + F + ++
Sbjct: 1222 QYSEVCQDRDDLLDSLKGCEESFNKYAVSLRELCTKSEIDVPVSEILDDNFVFNAGNFSE 1281
Query: 513 IHFLYQYSLKMFLDIFSSV 531
+ L SL+ +LD F+ V
Sbjct: 1282 LSRLTVLSLENYLDAFNQV 1300
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 89 IAQIEYADMLKRVEPLRNELQALEDQAQ--SNVTAGNEVRELIAQLEKSIASYKEEYAQL 146
I I Y +V+ L +L+ ++D+ S NE R Q+E +++ EY
Sbjct: 929 IGGIRYRIQKSKVDDLHEQLKFVKDKLNKMSFKKKKNEQRSQSFQVE--LSNLTSEYDTT 986
Query: 147 ISQAQAIKTDLENVQAKVDRSIALLKSLVIERERWESSS 185
+KT+L+++ VD + L+ E W+ +S
Sbjct: 987 TESIATLKTELQSLNKYVDEHKSRLRE--FENALWDINS 1023
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 28.7 bits (61), Expect = 5.8
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 92 IEYADMLKRVEPLRNELQALEDQ---AQSNVTAGN--EVRELIAQLEKSIASYKEEYAQL 146
+E + ++ +RNEL L DQ ++S + E+R + ++ K Y ++ +L
Sbjct: 148 VELNALQTSIDTIRNELNELRDQLNDSESKKLSDKFVEIRSELDEVRKQQDGYYKDQRKL 207
Query: 147 ISQAQAIKT---DLENVQAKVDR--SIALLKSLVIERERWESSSETFR 189
I++ KT DL N + + R L ERE+ E FR
Sbjct: 208 IAERDDEKTALDDLYNQRRALQREYDTQLRAFRTYEREQRAKRQEQFR 255
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 117 SNVTAGNEVRELIAQLEKSI-ASYKEEYAQLISQAQAIKTDLENVQAKVDRSIALLKSLV 175
S+ N + L + +EKS+ + KEE A S A+K +LE +++ ++ SIA L++ V
Sbjct: 770 SSTLTENTGKILESVVEKSMQVALKEEIAN--SVRNALKNNLEKIESFLENSIAELQNSV 827
Query: 176 IERERWESSS 185
E ++SS
Sbjct: 828 REDFDKQTSS 837
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 959 SFLSKLFTP-----KSFEADFALVANVDGATGNQRHITMPDGNRRDNFLKW 1004
S+L+K+ P FE F L + G N+ H+ + DGNRR W
Sbjct: 551 SWLAKILEPGPISLNPFETSF-LNTTIAGMYSNKEHVGVTDGNRRRKAAFW 600
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 96 DMLKRVEPLRNELQALEDQAQSNVTAGN----EVRELIAQLEKSIASYKEEYAQLISQAQ 151
D++K++ L++ L DQA+ + +V EL QL + + Y E SQ
Sbjct: 193 DLIKQITELQDMLDKARDQARKKSRTVDILEGKVNELTHQLNMADSKYNESKVANNSQNN 252
Query: 152 AIKTDLENVQAKVDRSIALLKSLVIE 177
IKT L+ + ++ ++S +I+
Sbjct: 253 QIKT-LKAQNLNIHKNFQKIQSELIQ 277
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/63 (22%), Positives = 31/63 (49%)
Query: 101 VEPLRNELQALEDQAQSNVTAGNEVRELIAQLEKSIASYKEEYAQLISQAQAIKTDLENV 160
V+ L+ L+ +ED+ + + N + +LE+ I+ + + + + +K DLE
Sbjct: 516 VQYLQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKS 575
Query: 161 QAK 163
+ K
Sbjct: 576 KKK 578
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/35 (40%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
Query: 451 KILDD-DSVIATLETLKKEADDIGQ--KVEETDKV 482
K+L+D DS I++LE+LK+E +++ + KVE + +
Sbjct: 640 KVLEDNDSTISSLESLKRENEELREQLKVEHEENI 674
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 533 ICPLLNGVTDYTARLKIITEELFAVVYERVARGMLHTDRLTFALL 577
+C + N TDY +L + ++L AV + +L TD T +L
Sbjct: 332 LCGIFNAPTDYIHKLALSDDDLLAVACKNGYGYLLSTDNSTGEIL 376
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,986,765
Number of Sequences: 5004
Number of extensions: 252192
Number of successful extensions: 822
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 764
Number of HSP's gapped (non-prelim): 77
length of query: 1347
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1266
effective length of database: 1,957,154
effective search space: 2477756964
effective search space used: 2477756964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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