Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001546-TA|BGIBMGA001546-PA|IPR013594|Dynein heavy chain,
N-terminal region 1, IPR013602|Dynein heavy chain, N-terminal region
2, IPR011704|ATPase associated with various cellular activities,
AAA-5, IPR003593|AAA ATPase
(3072 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 45 3e-05
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 37 0.007
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 35 0.038
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 32 0.20
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 29 1.4
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 29 1.9
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 28 4.3
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 7.6
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 27 7.6
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/121 (20%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 2891 AEKRADLEEQ--QLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQAKNEAANAKLRQMVK 2948
A+KRA+ E+Q +++ N+ + +T + V+ ++++ L+ +A + +++ K
Sbjct: 816 AKKRAEFEQQIDRINNNLEFERSKDTSKNVQRWERAVQDDEDSLETFKQAEARQRQEIEK 875
Query: 2949 DQQEAEKKKVESQEIQVALEKQTKEIEAKRRDVMA---DLAQVEPAVIEAQNAVRSIKKQ 3005
D+++ E K E + +++ +E+ RR+V A +LA + ++ ++ + S+K +
Sbjct: 876 DKEKIELMKQEKAAHKTLVDQMEEEMAKARREVQALAKELAAIHQSIANIESRIESMKSK 935
Query: 3006 Q 3006
+
Sbjct: 936 R 936
Score = 31.5 bits (68), Expect = 0.35
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 2884 QQMVKLYAEKRADLEEQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQAKNEAANAKL 2943
+Q YA + + E+Q+H L K+ ++ + +++ K QEL +
Sbjct: 213 KQEADRYASLKQECSEKQVHFQ--LFKLYHNEKEAKRLKEDQISKQQELNIIEK------ 264
Query: 2944 RQMVKDQQEAEKKKVESQEIQVALEKQTKEIEAKRRDVMADLAQVEPAVIEAQNAVRSIK 3003
R+ D+ EKKK E ++ + K+ +EI R+V A++++ P I+A+ V +
Sbjct: 265 RKEEADEVLKEKKK-EVGKMTREMAKKEQEI----REVEAEMSKRHPMFIKAKEKVAHTQ 319
Query: 3004 KQ 3005
K+
Sbjct: 320 KK 321
Score = 29.1 bits (62), Expect = 1.9
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 458 AKQID-HQLTAYLKRVEDVLGKGWENHIEGQKLKADGDSFRLKLDTQEVFDDWARKVQQR 516
A Q D +L L+ VE V +EN + G+ K G + L+ D + +D R Q+
Sbjct: 338 AHQADIKKLVDELQEVE-VKRAAFENEVAGESKKR-GSNVHLERDLVQEYD---RLKQKA 392
Query: 517 NLGVSGRIFAIDSVRARSSKTGTILKLKVNFLPEIITLYKEVRNLKN 563
+ S + +DSV L ++N +I YK++ + KN
Sbjct: 393 DATSSKYLIHLDSVNREQKSDQDRLDSEINKKAQIEENYKKIESEKN 439
Score = 27.1 bits (57), Expect = 7.6
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 2922 QKSLAVKSQELQAKNEAANAKLRQMVKDQQEAEKKKVESQEIQVAL-EKQTKEIEAKRRD 2980
QK + ++ +A+ E A +K QE +K+V Q ++ EK+ K ++ +
Sbjct: 197 QKKRGIAAERKEARLEKQEADRYASLK--QECSEKQVHFQLFKLYHNEKEAKRLKEDQIS 254
Query: 2981 VMADLAQVEPAVIEAQNAVRSIKKQQLVEVRSMANPPSVVK 3021
+L +E EA ++ KK+ R MA ++
Sbjct: 255 KQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIR 295
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 37.1 bits (82), Expect = 0.007
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 2857 LHQANARLAKRANRTMAITPRHYLDFIQQMVKLYAEKRADLEEQQLHLNVGLGKIAETVE 2916
LHQ + K + T L + +V + L E+ H L K+ + +E
Sbjct: 746 LHQRQQHMKKLQQELL--TNEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIE 803
Query: 2917 Q----VEEMQKSLAVKSQELQAKNEAANAKLRQMVKDQQEAEKKKVESQEIQV------- 2965
+ ++++++++ + Q QAK +A A ++ + Q +K++ ++Q
Sbjct: 804 EEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEAEIARIQASIDKEQQARHDLQTNHKVKQQ 863
Query: 2966 ALEKQTKEIEAKRRDVMADLAQVEPAVIEA-QNAVRSIKKQQLVEVRSM 3013
AL++ T+ +E ++R +A A +E A EA + R + +Q+ V +
Sbjct: 864 ALKRSTESMEERKRTRVALSAALEQARQEASEKGERPDESEQIPSVEQL 912
Score = 31.5 bits (68), Expect = 0.35
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 2853 VHQTLHQANARLAKRANRTMAITPRHYLDFIQQMVKLYAEKRADLEE--------QQLHL 2904
+ Q L++ A +AK+A R + + L+++ + + EK+++LE +L
Sbjct: 257 IKQKLNEC-AVIAKKA-RDVLVVKEKSLEYLSNEIVVLEEKQSNLESAGRMGELLSELQA 314
Query: 2905 NVGLGKIAETVEQV----EEMQK-SLAVKSQELQAKN-EAANAKLRQMVKDQQ-EAEKKK 2957
+ + + EQ+ +E++K +++ QE + +N EA AK + + + E KK
Sbjct: 315 KLAWRNVIDQEEQLAAVDDELKKLRTSIEEQEHRIRNREALVAKTDSTIDTYRADIESKK 374
Query: 2958 VESQEIQVALEKQTKEIEAKRRDVMADLAQVEPAVIEAQNAVRSIKK 3004
E VAL++ + +DV A A +E + A V I+K
Sbjct: 375 QE----YVALKEAYGTVRRTLQDVQAKQAAIERGMRNASERVTRIQK 417
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 2884 QQMVKLYAEKRADLEEQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQAKNEAANAKL 2943
+++ ++ + R ++ Q GL ++ + + VE + L ++ EL + +A ++
Sbjct: 410 ERVTRIQKDARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKERNDELASMIASAQREV 469
Query: 2944 RQM------VKD-QQEAEKKKVESQEIQVALEKQTKEIEAKRRDVMADLAQVEPAVI 2993
M VKD ++E ++ Q +EKQ ++ E+ R +A PA++
Sbjct: 470 DLMYNTMAHVKDAREEKHHERCAKQSETTRIEKQLEQFESAPRSKLAVYGTNMPALV 526
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/114 (17%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 2894 RADLE---EQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQAKNEAANAKLRQMVKDQ 2950
RAD+E ++ + L G + T++ V+ Q ++ + + RQ+ +D
Sbjct: 367 RADIESKKQEYVALKEAYGTVRRTLQDVQAKQAAIERGMRNASERVTRIQKDARQIEQDL 426
Query: 2951 QEAEKKKV-ESQEIQVALEKQTKEIEAKRRDVMADLAQVEPAVIEAQNAVRSIK 3003
QE + + + ++ + A+E + +++ + ++ + +A + V N + +K
Sbjct: 427 QERNRDGLSQVEQRKQAVETEKAQLKERNDELASMIASAQREVDLMYNTMAHVK 480
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 34.7 bits (76), Expect = 0.038
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 1018 NIDGEWSAFNEIMRRKDSSIQTQVASLQQKIVAEDKAVETRTLEFLTEWERN--KPTDGS 1075
N+D NEI K +QT++ L ++I + T+E T ERN K D
Sbjct: 879 NVDRYTEQINEITNSKVKVLQTKINGLGKQIDKLSANISKLTVEIKTS-ERNVQKSKDKI 937
Query: 1076 TRPED----ALSRLQAMETRYTRLKDE----RDNVAKAKEALE-LHDTGSSINNERMTVV 1126
ED A S ++ T+L++E R+ + + K A+E H+ SSI E + +
Sbjct: 938 NSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQ 997
Query: 1127 LEELQ------DLRGVWQQLEAMLNELKE 1149
E + + + Q +E L E K+
Sbjct: 998 KREAEGKMKRLEFEQILQTIETKLQETKD 1026
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 2910 KIAETVEQVEEMQKSLAVKSQELQAKNEAANAKLRQMVKDQQEAEKKKVESQEIQVALEK 2969
++ E E K+ K ++QA A N + ++ ++ EK+ +E Q++ +K
Sbjct: 366 ELVSAKESKESTLKNSLDKFAKVQANMRATNERRKKTLEQIAAEEKRLLELQDVPKKNKK 425
Query: 2970 QTKEIEAKRRDVMADLAQVEPAVIEAQNAVRSIKKQQLVE 3009
+ +E EAK + +VE A + A A + + L+E
Sbjct: 426 EIEESEAKIESLTRQKTEVE-AKLTANLATLKDETKVLLE 464
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/101 (21%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 2887 VKLYAEKRADLEEQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQAKNEAANAKLR-- 2944
VK+ K L +Q L+ + K+ ++ E + K ++ + EAA + +R
Sbjct: 895 VKVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKG 954
Query: 2945 --QMVKDQQEAEKKKVESQEIQVALEKQTKEIEAKRRDVMA 2983
+ + ++EA K + E +E+++A+EK + + +++++A
Sbjct: 955 NDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVA 995
Score = 31.1 bits (67), Expect = 0.47
Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 2883 IQQMVKLYAEKRADLEEQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQAKNEAANAK 2942
+++ +K Y E + E ++ L L K A+ + + +++ AA K
Sbjct: 357 VKEEIKQYDELVSAKESKESTLKNSLDKFAKVQANMRATNERRKKTLEQI-----AAEEK 411
Query: 2943 LRQMVKDQQEAEKKKVESQEIQV-ALEKQTKEIEAKRRDVMADLAQVEPAVIEAQNAVRS 3001
++D + KK++E E ++ +L +Q E+EAK +A L ++E + +++
Sbjct: 412 RLLELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLATLKDETKVLLEEKEKLQT 471
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 32.3 bits (70), Expect = 0.20
Identities = 27/156 (17%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Query: 2854 HQTLHQANARLAKRANRTMAITPRHYLDFIQQMVKLYAEKRADLEEQQLHLNVGLGKI-A 2912
H L+ L +R +T + ++ + + ++ + + E Q + + + A
Sbjct: 717 HDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQA 776
Query: 2913 ETVEQVEEMQKSLAVKSQELQAKNEAANAKLRQMVKDQQEAEKKKVESQEIQ---VALEK 2969
+ + ++ L ++L+ + + + K +Q+ E K+E +E+Q V ++
Sbjct: 777 KIADGKGHRERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKE 836
Query: 2970 QTKEIEAKRRDVMADLAQVEPAVIEAQNAVRSIKKQ 3005
Q ++E + + L +V E AV ++K+Q
Sbjct: 837 QAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQ 872
Score = 27.5 bits (58), Expect = 5.7
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 2884 QQMVKLYAEKRADLEEQQLHLNVGLGKIAETV----EQVEEMQKSLAVKSQELQAKNEAA 2939
+Q VKL E+ A L+++ + ++ ++ V +Q+++ ++ + +S+EL+AK
Sbjct: 836 EQAVKL-EEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQR 894
Query: 2940 NAKLRQMVKDQQEAEKKKVESQEIQVALEKQ 2970
+ L+Q D+ + E KK E++ +V E +
Sbjct: 895 DKLLKQ--NDELKLEIKKKENEITKVRNENK 923
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 29.5 bits (63), Expect = 1.4
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 2845 AVVNACVYVHQTLHQANARLAKRANRTMAITPRHYLDFIQQMVKLYAEKRADLEEQQLHL 2904
A N +H Q N RLAK NR + I++ + L E + + + QL+
Sbjct: 1464 ATKNTARDLHHEADQLNGRLAKTDNRLEEREAQ-----IRKDLNLTNEAKEKVGQAQLNS 1518
Query: 2905 NVGLGKIAETVEQVEEMQKSLAVKSQELQAKN-EAANAKLRQMVKDQQEAEKKKVESQEI 2963
N ++ + + +V + LA +E+ + + +L K+ ++A+ K S +
Sbjct: 1519 NEAKSQVDKAMREVSLIMSELA-NLREIDVNSLDDLERRLSAAEKELEDAQLTKRLSSLV 1577
Query: 2964 QVALEKQTKEIEAKRRDVMADLAQVEPAVIE 2994
+ A Q + I + +++ +ADL ++E A IE
Sbjct: 1578 E-AKNIQNQNIRSYQKE-LADL-RLEVANIE 1605
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 29.1 bits (62), Expect = 1.9
Identities = 31/173 (17%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 2879 YLDFIQQMVKLYAEKRADLEEQQLHLNVGLGKIAETVEQVEEMQKSLAVKSQELQAKNEA 2938
Y IQ+ K A+ RA+L++ + ++N I +++ E Q +++QA
Sbjct: 686 YSQLIQEHEKELADFRAELKQTEANIN----SIVSEMQKTETKQGKSKDAFEKIQADIRL 741
Query: 2939 ANAKLRQMVKDQQEAEKKKVESQEIQVALEKQTKEIEAK-RRDVMADLAQVEPAVIEAQN 2997
+L ++ + + E+ + + A+ + +E + +++M+ L+ + +++ N
Sbjct: 742 MKDELSRIERFRSPKERSLAQCKANLEAMTSTKEGLENELHQELMSQLSVQDQHEVDSLN 801
Query: 2998 AVRSIKKQQLVEVRSMANPPSVVKMALESICT--LLGEKGDTWKGIRSVVMKD 3048
Q+ E + V K LE++ T L K + + ++ + ++D
Sbjct: 802 DEIRRLNQENKEAFTSRMSLEVTKNKLENLLTNNLFRRKDELVQALQEISVED 854
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/55 (21%), Positives = 31/55 (56%)
Query: 2908 LGKIAETVEQVEEMQKSLAVKSQELQAKNEAANAKLRQMVKDQQEAEKKKVESQE 2962
+G + EQ++ Q++ SQ+ Q + + + + +Q+ + QQ+ +++ SQ+
Sbjct: 218 VGGTPPSPEQLQNHQQTAQQSSQQQQQQQQQQSLQQQQLSQQQQQQRQRQPSSQQ 272
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.1 bits (57), Expect = 7.6
Identities = 20/107 (18%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 2910 KIAETVEQVEEMQKSLAVKSQELQAKNEAANAKLRQMVKDQQEAEKKKVESQEIQVALEK 2969
K+ E ++ A +++E + E Q ++Q+E E+++ E +E + E+
Sbjct: 442 KLEEEHRAARLREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEER-ER 500
Query: 2970 QTKEIEAKRRDVMADLAQVEPAVIEAQNAVRSIKKQQLVEVRSMANP 3016
Q +E E + R+ + E A + R ++++++ + + P
Sbjct: 501 QQREKEQREREQREKEREREAARERERERERERERERMMHMMPHSLP 547
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 27.1 bits (57), Expect = 7.6
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 2898 EEQQLHLNVGLGKIAETVEQVEE--MQKSLAVKSQELQAKNEAANAKLRQ----MVKDQQ 2951
E++ L+L + + V QV+ + + + + +AK AA+ K Q VKD Q
Sbjct: 298 EDKSLYLREEVCAVGIDVWQVKSGTIFDNFMITNDLEEAKKVAASVKETQEGEKKVKDAQ 357
Query: 2952 EAEKKKVESQEIQVALEKQTKEIEAKRRDVMADLA 2986
EAE++K E + A E+ K+ E + + AD A
Sbjct: 358 EAEERK--KAEGEAAAEEAAKDDEDEDDEDDADNA 390
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.320 0.135 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,010,507
Number of Sequences: 2123
Number of extensions: 124863
Number of successful extensions: 404
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 381
Number of HSP's gapped (non-prelim): 35
length of query: 3072
length of database: 516,269
effective HSP length: 77
effective length of query: 2995
effective length of database: 352,798
effective search space: 1056630010
effective search space used: 1056630010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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