Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001545-TA|BGIBMGA001545-PA|IPR007110|Immunoglobulin-like
         (187 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.22 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.0  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   3.5  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    22   3.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   3.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 29  HADGSDEWTLRVSPAQPRDSGAYECQVSTE---PKISLSFRLTVVVSKAEILSG-PELFV 84
           H    +E  LR+   +  D G Y+C +  +    + +   +L       +I     E  V
Sbjct: 366 HPIDHNEAVLRIESVRKEDKGMYQCFIRNDQESAEATAELKLGGRFEPPQIRHAFNEETV 425

Query: 85  RAGSDINLTCVAKHAPDP 102
           + G+ + L C+A   P P
Sbjct: 426 QPGNSVFLKCIASGNPTP 443



 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 37  TLRVSPAQPRDSGAYECQVS 56
           TL +  A+  DSG Y C V+
Sbjct: 291 TLIIREAKVEDSGKYLCVVN 310


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 106 KIRILQNVIEFSDSFRKNENSITKVIKDDIFQLYLLV 142
           K R+L N  +  D   K  +   KV +  + QL+L +
Sbjct: 103 KWRLLNNNFQQIDKIFKTRDDRVKVYQAPVLQLFLYI 139


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 103 PRGKIRILQNVIEFSDSFRKNENSITKVIKDDI 135
           P GK   L+N  E  D + K       +I +D+
Sbjct: 6   PFGKFESLRNAAELKDFYYKTFPDAVPLIGEDL 38


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 103 PRGKIRILQNVIEFSDSFRKNENSITKVIKDDI 135
           P GK   L+N  E  D + K       +I +D+
Sbjct: 21  PFGKFESLRNAAELKDFYYKTFPDAVPLIGEDL 53


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 103 PRGKIRILQNVIEFSDSFRKNENSITKVIKDDI 135
           P GK   L+N  E  D + K       +I +D+
Sbjct: 239 PFGKFESLRNAAELKDFYYKTFPDAVPLIGEDL 271


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 103 PRGKIRILQNVIEFSDSFRKNENSITKVIKDDI 135
           P GK   L+N  E  D + K       +I +D+
Sbjct: 239 PFGKFESLRNAAELKDFYYKTFPDAVPLIGEDL 271


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 103 PRGKIRILQNVIEFSDSFRKNENSITKVIKDDI 135
           P GK   L+N  E  D + K       +I +D+
Sbjct: 239 PFGKFESLRNAAELKDFYYKTFPDAVPLIGEDL 271


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,891
Number of Sequences: 317
Number of extensions: 1591
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 187
length of database: 114,650
effective HSP length: 53
effective length of query: 134
effective length of database: 97,849
effective search space: 13111766
effective search space used: 13111766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)