Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001545-TA|BGIBMGA001545-PA|IPR007110|Immunoglobulin-like
(187 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 28 0.064
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.11
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 27 0.11
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 26 0.20
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 3.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 4.2
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 9.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.7
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 27.9 bits (59), Expect = 0.064
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 28 LHADGSDEWT--LRVSPAQPRDSGAYECQV-STEPKISLSFRLTVVVSKAEILSGPELFV 84
+H D++ L + P +G Y C + ++S + RL V V I+ ++ V
Sbjct: 658 VHVTNMDQYNSILMIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPPRWIVEPTDVSV 717
Query: 85 RAGSDINLTCVAKHAPDP 102
+ L C A+ P P
Sbjct: 718 ERNKHVALHCQAQGVPTP 735
Score = 27.1 bits (57), Expect = 0.11
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 38 LRVSPAQPRDSGAYECQVS 56
L++S A+ DSGAY CQ S
Sbjct: 868 LQISSAEASDSGAYFCQAS 886
Score = 25.8 bits (54), Expect = 0.26
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 38 LRVSPAQPRDSGAYECQV-STEPKISLSFRLTVVVSKAEILSGPELFVRAGSDINL 92
L +S Q +D G Y CQV + + L + LTV V S P L+V + + ++
Sbjct: 1365 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQVPP----SAPVLYVTSSTSSSI 1416
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 27.1 bits (57), Expect = 0.11
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 38 LRVSPAQPRDSGAYECQVSTEP-KISLSFRLTVVVSKAEILSGPELFVRAGSDINLTCVA 96
L +S R +G Y C S S LTV V IL + GSD + C A
Sbjct: 643 LMISVITARHAGEYVCTAENAAGTASHSTTLTVNVPPRWILEPTDKAFAQGSDARVECKA 702
Query: 97 KHAPDP 102
P P
Sbjct: 703 DGFPKP 708
Score = 25.8 bits (54), Expect = 0.26
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 32 GSDEWTLRVSPAQPRDSGAYECQVSTE---PKISLSFRLTVVVSKAEILSG-PELFVRAG 87
G +E LR+ + D G Y+C V + + + +L +I E ++ G
Sbjct: 349 GLEEAVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPG 408
Query: 88 SDINLTCVAKHAPDP 102
+ L CVA P P
Sbjct: 409 PSMFLKCVASGNPTP 423
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 27.1 bits (57), Expect = 0.11
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 38 LRVSPAQPRDSGAYECQVS 56
L++S A+ DSGAY CQ S
Sbjct: 872 LQISSAEASDSGAYFCQAS 890
Score = 25.8 bits (54), Expect = 0.26
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 38 LRVSPAQPRDSGAYECQV-STEPKISLSFRLTVVVSKAEILSGPELFVRAGSDINL 92
L +S Q +D G Y CQV + + L + LTV V S P L+V + + ++
Sbjct: 1369 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQVPP----SAPVLYVTSSTSSSI 1420
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 26.2 bits (55), Expect = 0.20
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 38 LRVSPAQPRDSGAYECQVSTE 58
+ + PA +D+G YECQ +
Sbjct: 85 MEIDPATQKDAGYYECQADNQ 105
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 70 VVSKAEILSGPELFVRAGSDINLTCVAKHAPDPP 103
VVS + L + R G ++ + C P PP
Sbjct: 308 VVSLDKSLEVNHISARVGDNVEIKCDVTGTPPPP 341
Score = 20.6 bits (41), Expect = 9.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 47 DSGAYECQVST 57
D+GAY CQ S+
Sbjct: 468 DTGAYMCQASS 478
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 4.2
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 112 NVIEFSDSFRKNENSITKVIKDDIFQLYLLVPRR 145
N+++F + + KVIK DI ++ ++ R+
Sbjct: 342 NILKFLKQKYVKNSKLEKVIKHDILRMLIIDLRK 375
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 22 DARFAALHADGSDEW 36
DARF A HA D++
Sbjct: 518 DARFIAQHAKNKDKF 532
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 42 PAQPRDSGAYECQVST 57
PA P DSG + + ST
Sbjct: 242 PASPADSGVSDVESST 257
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.320 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,260
Number of Sequences: 429
Number of extensions: 2011
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 187
length of database: 140,377
effective HSP length: 54
effective length of query: 133
effective length of database: 117,211
effective search space: 15589063
effective search space used: 15589063
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)
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