Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001544-TA|BGIBMGA001544-PA|undefined
         (214 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.34 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   1.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.4  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   5.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   5.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   9.7  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 133 VAVYGSVTFFVFEGLRKFYDVDTYTMAYLIMYKYKFITLRHY 174
           VA Y S+   + + +R   +   YT+ +L +Y +  ITL  Y
Sbjct: 263 VADYRSLWMLLSKLIRDVGNASGYTVTFLCLYLFLIITLTIY 304


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 139 VTFFVFEGLRKFYDVDTYTMAYLIMYKYKFITLRHYFKRLRENVDELVAAGKARLAAEKL 198
           + F VF  L  +      ++ YLI+ +    T+    +  R  +D ++  GK    AEKL
Sbjct: 5   IHFLVFGALLTYVS----SVEYLILREID--TILKNDQMTRNYLDCVLDKGKCTKEAEKL 58

Query: 199 AQGLVEGIK 207
            +G+ E +K
Sbjct: 59  KKGITETMK 67


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 37  LYKIYSCVLFFTYGFMTVLEIMAATMGDFPDDEKRDSVTFASSHTLIMIKFISIIKNKEL 96
           L K  S ++ F+ GF     +M           +  ++ F  S   I+++F+S+ ++   
Sbjct: 353 LDKELSYLILFSIGF-NCFWVMKLLYNVLRFGAESQTINFMFSFGFILLRFLSVFESCTR 411

Query: 97  LKTLNRKMMMICE 109
           L   +RK   + +
Sbjct: 412 LNNESRKPSFVIQ 424


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 16  FLVGSGNFWYQKTESRNDKTLLYK 39
           +L+ +   W+ + E++ D T +YK
Sbjct: 90  YLIKNKRDWWNELEAKYDPTGIYK 113


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 16  FLVGSGNFWYQKTESRNDKTLLYK 39
           +L+ +   W+ + E++ D T +YK
Sbjct: 90  YLIKNKRDWWNELEAKYDPTGIYK 113


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 35  TLLYKIYSCVLFFTYGFMTVLEIMAATM 62
           T  + ++S   +FT    TVL+++  T+
Sbjct: 273 THYFPVFSACDYFTIETKTVLDVLGVTV 300


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query: 38  YKIYSCVLFFTYGFMTVLEIMAATM 62
           + ++S   +FT    TVL+++  T+
Sbjct: 350 FPVFSACDYFTIETKTVLDVLGVTV 374


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase
          like protein E1 protein.
          Length = 139

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 14 KIFLVGSGNFWYQKTESRNDKTLLYKIYSCVLFFTYG 50
          K  +VGS N       ++N +T   +I   VLF+ +G
Sbjct: 46 KNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFWIHG 82


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.140    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,383
Number of Sequences: 317
Number of extensions: 2102
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 214
length of database: 114,650
effective HSP length: 54
effective length of query: 160
effective length of database: 97,532
effective search space: 15605120
effective search space used: 15605120
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 41 (20.6 bits)