GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001543-TA|BGIBMGA001543-PA|undefined
         (110 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    20   6.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    19   8.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    19   8.7  

>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 33  YLSLVAYGVESARRTIVEGERFN 55
           +LSL  YG+    +   E E+F+
Sbjct: 84  FLSLFIYGMHHNEKYFPEPEKFD 106


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 51  GERFNTLTAMTILLGLLE 68
           G++F  L   T+L G+L+
Sbjct: 437 GQKFAMLEIKTVLCGILK 454


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 51  GERFNTLTAMTILLGLLE 68
           G++F  L   T+L G+L+
Sbjct: 437 GQKFAMLEIKTVLCGILK 454


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.138    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,807
Number of Sequences: 317
Number of extensions: 501
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 110
length of database: 114,650
effective HSP length: 49
effective length of query: 61
effective length of database: 99,117
effective search space:  6046137
effective search space used:  6046137
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.7 bits)
S2: 38 (19.4 bits)