Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001542-TA|BGIBMGA001542-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif)
(470 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 187 2e-47
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 59 6e-09
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 59 6e-09
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 59 6e-09
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 58 1e-08
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 52 7e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 52 7e-07
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 51 2e-06
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 51 2e-06
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 49 6e-06
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 49 6e-06
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 49 6e-06
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 49 6e-06
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 47 3e-05
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 47 3e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 46 6e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 46 6e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 46 6e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 46 6e-05
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 46 8e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 45 1e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 45 1e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 45 1e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 44 2e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 44 2e-04
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 44 3e-04
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 44 3e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 43 5e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 43 5e-04
Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 7e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 40 0.005
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 40 0.005
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 40 0.005
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 39 0.009
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 39 0.009
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 39 0.009
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 39 0.009
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 39 0.009
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 39 0.009
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 39 0.009
Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 38 0.012
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 38 0.012
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 38 0.012
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 38 0.012
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 38 0.012
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 38 0.020
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 37 0.035
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 37 0.035
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.061
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.061
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.081
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 36 0.081
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 34 0.19
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 34 0.19
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 34 0.19
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 33 0.43
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 33 0.43
AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 33 0.57
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 33 0.57
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.57
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.76
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.76
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 31 1.3
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 31 1.3
Z66565-7|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 31 1.7
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 1.7
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 31 2.3
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 2.3
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 31 2.3
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 30 3.1
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 30 3.1
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 30 3.1
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 30 4.0
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 30 4.0
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 29 5.3
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 29 5.3
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 29 5.3
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 29 5.3
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 7.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.1
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 29 9.3
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 187 bits (455), Expect = 2e-47
Identities = 96/256 (37%), Positives = 149/256 (58%), Gaps = 10/256 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
+F++NI YE RW +LK L +EK G+VA+ ELL D +GK +G +VEF E +K + +
Sbjct: 47 VFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRNGKPKGNAVVEFETREGAEKCVENL 106
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWG--------INKPREPEN 151
+++ GR ++ KE T + + +R G +++P
Sbjct: 107 QKFDWKGRTIIAKEIRDPNAFFRTIKTETGIDYLSRTGGGGAGGRGPPPKDLDRPTRTGT 166
Query: 152 LNTYGLSLQFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGN 211
+ +GL+++FL N++PPL +++F+ANL + K+ EVF MAGK+ +D +DK+G
Sbjct: 167 YDLFGLNMEFLRQHNIEPPLCERIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGK 226
Query: 212 SRGFAVIEYDHPVEAVQAISMFDKQMLYERRMTVRMDR--GVTDKGELRLPEGLKGIGMG 269
S+G VI+Y HP+EAVQA+SM + Q L++R + V+MDR + E LP GL+ IGMG
Sbjct: 227 SKGVCVIQYTHPIEAVQAVSMLNGQRLFDRNLVVKMDRFDKELEHKEGGLPRGLESIGMG 286
Query: 270 LGPNGEPLRDVARNLP 285
LG G PL +V P
Sbjct: 287 LGAEGAPLSNVHGMFP 302
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 59.3 bits (137), Expect = 6e-09
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
++V N + L+ LF K G++ E++T + GK++G G V F N E + A+ +
Sbjct: 155 VYVKNFGDHYNKETLEKLFA-KFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 212
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSL 159
H + G L ++H R Q + R+ K + + + E + Y
Sbjct: 213 HDSTIEGTDL----------KLHVCRAQKKSERHAELKKKH----EQHKAERMQKY---- 254
Query: 160 QFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIE 219
+ +N+ +V NLD D +K+ F+ G + + + D++G S+GF +
Sbjct: 255 ---QGVNL--------YVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVC 303
Query: 220 YDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDK 254
++ P EA A++ + +M+ + + V + + D+
Sbjct: 304 FEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDR 338
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 59.3 bits (137), Expect = 6e-09
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
++V N + L+ LF K G++ E++T + GK++G G V F N E + A+ +
Sbjct: 152 VYVKNFGDHYNKETLEKLFA-KFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 209
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSL 159
H + G L ++H R Q + R+ K + + + E + Y
Sbjct: 210 HDSTIEGTDL----------KLHVCRAQKKSERHAELKKKH----EQHKAERMQKY---- 251
Query: 160 QFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIE 219
+ +N+ +V NLD D +K+ F+ G + + + D++G S+GF +
Sbjct: 252 ---QGVNL--------YVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVC 300
Query: 220 YDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDK 254
++ P EA A++ + +M+ + + V + + D+
Sbjct: 301 FEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDR 335
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFD 234
+F+ NLD D I + F + G + + +A+D+DG S+G+ + ++ A AI +
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 235 KQMLYERRMTV 245
+L +++ V
Sbjct: 119 GMLLAGKKVFV 129
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 59.3 bits (137), Expect = 6e-09
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
++V N + L+ LF K G++ E++T + GK++G G V F N E + A+ +
Sbjct: 215 VYVKNFGDHYNKETLEKLFA-KFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 272
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSL 159
H + G L ++H R Q + R+ K + + + E + Y
Sbjct: 273 HDSTIEGTDL----------KLHVCRAQKKSERHAELKKKH----EQHKAERMQKY---- 314
Query: 160 QFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIE 219
+ +N+ +V NLD D +K+ F+ G + + + D++G S+GF +
Sbjct: 315 ---QGVNL--------YVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVC 363
Query: 220 YDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDK 254
++ P EA A++ + +M+ + + V + + D+
Sbjct: 364 FEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDR 398
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFD 234
+F+ NLD D I + F + G + + +A+D+DG S+G+ + ++ A AI +
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 235 KQMLYERRMTV 245
+L +++ V
Sbjct: 182 GMLLAGKKVFV 192
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 58.4 bits (135), Expect = 1e-08
Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
++V N + L+ +F K G++ E++T + GK++G G V F N E + A+ +
Sbjct: 215 VYVKNFGDHYNKETLEKVFA-KFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 272
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSL 159
H + G L ++H R Q + R+ K + + + E + Y
Sbjct: 273 HDSTIEGTDL----------KLHVCRAQKKSERHAELKKKH----EQHKAERMQKY---- 314
Query: 160 QFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIE 219
+ +N+ +V NLD D +K+ F+ G + + + D++G S+GF +
Sbjct: 315 ---QGVNL--------YVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVC 363
Query: 220 YDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDK 254
++ P EA A++ + +M+ + + V + + D+
Sbjct: 364 FEKPEEATSAVTEMNSKMVCSKPLYVAIGQRKEDR 398
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFD 234
+F+ NLD D I + F + G + + +A+D+DG S+G+ + ++ A AI +
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 235 KQMLYERRMTV 245
+L +++ V
Sbjct: 182 GMLLAGKKVFV 192
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 52.4 bits (120), Expect = 7e-07
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 174 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMF 233
KVFV N+ ++A ++K +F G V ++ KDG +G A +++D A + ++
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASG 743
Query: 234 DKQMLYERRMTVRM 247
DK ML ER + V +
Sbjct: 744 DKLMLRERELEVAL 757
Score = 35.5 bits (78), Expect = 0.081
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
+FV N+ ++ ELK LF K G V V +T GK +G V+F + +K +
Sbjct: 685 VFVRNVHFQATDDELKALFS-KFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASG 743
Query: 100 HRYELNGRKL 109
+ L R+L
Sbjct: 744 DKLMLREREL 753
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAI 230
+ +FV+NLD+ + +I++ + +R A + D RGFA + ++ +A QA+
Sbjct: 593 RTIFVSNLDFTTTEDEIRQAIEGVASIRFARKA-NSDLVHRGFAYVVMENDQKAQQAL 649
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 52.4 bits (120), Expect = 7e-07
Identities = 24/82 (29%), Positives = 44/82 (53%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISM 232
+ +FV ++Y+ ++K++ F+ GK++ + + D+ G RG+A IEY E A
Sbjct: 104 RTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKK 163
Query: 233 FDKQMLYERRMTVRMDRGVTDK 254
D + +R+ V +RG T K
Sbjct: 164 ADGIKVDGKRLVVDYERGRTQK 185
Score = 41.9 bits (94), Expect = 0.001
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
LFV I YE ++L+ F E G + + ++ D++GK RG +E+++ M A
Sbjct: 106 LFVGRINYETSESKLRREF-EAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKA 164
Query: 100 HRYELNGRKLVLKEETGNERR 120
+++G++LV+ E G ++
Sbjct: 165 DGIKVDGKRLVVDYERGRTQK 185
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 51.2 bits (117), Expect = 2e-06
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
++VSNIP+ FR +L +F G V VE++T+D G ++G G V + E+ +KA +
Sbjct: 53 IYVSNIPFSFREQDLAAMF-FAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAAL 110
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQH 128
H + GR + ++ T R++ + PQ+
Sbjct: 111 HESHVQGRIIEVRRATPTRRKL-INNPQN 138
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 51.2 bits (117), Expect = 2e-06
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
++VSNIP+ FR +L +F G V VE++T+D G ++G G V + E+ +KA +
Sbjct: 53 IYVSNIPFSFREQDLAAMF-FAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAAL 110
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQH 128
H + GR + ++ T R++ + PQ+
Sbjct: 111 HESHVQGRIIEVRRATPTRRKL-INNPQN 138
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 49.2 bits (112), Expect = 6e-06
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 143 INKPREPE-NLNTYGLSLQFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRN 201
+ +PR+ + + NT+ ++ + S V K+F+ L + ++KE+ G ++
Sbjct: 261 VRRPRDYQPSQNTFDMNSRMPVSTIVVDS-ANKIFIGGLPNYLTEDQVKELLCSFGPLKA 319
Query: 202 IDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDKGELRLPE 261
L VD GNS+G+A EY P QAI+ + L ++++ V++ + LP
Sbjct: 320 FSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPN 379
Query: 262 GLKGI 266
I
Sbjct: 380 SASAI 384
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 49.2 bits (112), Expect = 6e-06
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 143 INKPREPE-NLNTYGLSLQFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRN 201
+ +PR+ + + NT+ ++ + S V K+F+ L + ++KE+ G ++
Sbjct: 261 VRRPRDYQPSQNTFDMNSRMPVSTIVVDS-ANKIFIGGLPNYLTEDQVKELLCSFGPLKA 319
Query: 202 IDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDKGELRLPE 261
L VD GNS+G+A EY P QAI+ + L ++++ V++ + LP
Sbjct: 320 FSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPN 379
Query: 262 GLKGI 266
I
Sbjct: 380 SASAI 384
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 49.2 bits (112), Expect = 6e-06
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 143 INKPREPE-NLNTYGLSLQFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRN 201
+ +PR+ + + NT+ ++ + S V K+F+ L + ++KE+ G ++
Sbjct: 236 VRRPRDYQPSQNTFDMNSRMPVSTIVVDS-ANKIFIGGLPNYLTEDQVKELLCSFGPLKA 294
Query: 202 IDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDKGELRLPE 261
L VD GNS+G+A EY P QAI+ + L ++++ V++ + LP
Sbjct: 295 FSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPN 354
Query: 262 GLKGI 266
I
Sbjct: 355 SASAI 359
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 49.2 bits (112), Expect = 6e-06
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 143 INKPREPE-NLNTYGLSLQFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRN 201
+ +PR+ + + NT+ ++ + S V K+F+ L + ++KE+ G ++
Sbjct: 239 VRRPRDYQPSQNTFDMNSRMPVSTIVVDS-ANKIFIGGLPNYLTEDQVKELLCSFGPLKA 297
Query: 202 IDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDKGELRLPE 261
L VD GNS+G+A EY P QAI+ + L ++++ V++ + LP
Sbjct: 298 FSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPN 357
Query: 262 GLKGI 266
I
Sbjct: 358 SASAI 362
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 48.0 bits (109), Expect = 1e-05
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 148 EPENLNTYGLSLQFL--ESINVQPPLVK--KVFVANLDYKADQAKIKEVFKMAGKVRNID 203
E E + +G SL+ E V+ +++ ++F+ NL Y + ++ +FK G+V +
Sbjct: 250 EHEVIEEHGASLESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQ 309
Query: 204 LAVDKD-GNSRGFAVIEYDHPVEAVQAISMFDKQMLYERRMTVRM-DRGVTDKGE 256
+ +DK G +GFA++E+ P AV A S D + R M + D T +GE
Sbjct: 310 VVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHILPGDEKRTKEGE 364
Score = 47.2 bits (107), Expect = 2e-05
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDD-SGKARGCGIVEFTNTEAMKKALFV 98
LF+ N+PY + +L+ LFK K G+V+ V+++ D +G +G IVEF EA A
Sbjct: 281 LFLRNLPYATKEDDLQFLFK-KYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 99 MHRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDN 140
+ Y GR + + G+E+R ++ E DD DN
Sbjct: 340 LDGYVFKGRMMHIL--PGDEKR---TKEGEEESEVVPDDPDN 376
Score = 36.7 bits (81), Expect = 0.035
Identities = 19/88 (21%), Positives = 42/88 (47%)
Query: 171 LVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAI 230
+ ++ V NL + ++++ F+ G++ + L K+G RGFA + + A A+
Sbjct: 1 MTTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNAL 60
Query: 231 SMFDKQMLYERRMTVRMDRGVTDKGELR 258
+ ++ +++TV R D + R
Sbjct: 61 AKSNQTFFNSKKLTVEECRPFGDANKPR 88
Score = 34.7 bits (76), Expect = 0.14
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
L V N+P +L+ F EK G ++ L GK RG V F + + AL
Sbjct: 5 LIVKNLPSTCTEQQLRKFF-EKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAKS 63
Query: 100 HRYELNGRKLVLKE 113
++ N +KL ++E
Sbjct: 64 NQTFFNSKKLTVEE 77
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.8 bits (106), Expect = 3e-05
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 98
+FV NI Y+ ++ +F K G+V ++++ D ++GK +G G +EF + + + A+
Sbjct: 20 VFVGNISYDVSEDTIRSIFS-KAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 99 MHRYELNGRKLVLKEETG 116
++ YEL+GR L + G
Sbjct: 79 LNGYELSGRILRVDSAAG 96
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 46.8 bits (106), Expect = 3e-05
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 169 PPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQ 228
PP + ++VAN + D+ ++E+F AG V + L +D N++ FA++E++ + +
Sbjct: 9 PPEERTIYVANFSEEVDEELLEELFIQAGPVVKVILRDVRDSNAK-FALVEFEDELSVLF 67
Query: 229 AISMFDKQMLYERRMTVRMDRGVTDKGEL 257
AI + + L+ + + V+ G T++ EL
Sbjct: 68 AIELMNGVRLFNQELQVKPRNG-TNQEEL 95
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 46.0 bits (104), Expect = 6e-05
Identities = 44/215 (20%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
+FV N +L +F K G++ ++TD GK +G G V F + +A +A+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFS-KFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAV--- 295
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSL 159
+LN L G + ++ R Q + R+ + + + R +
Sbjct: 296 --EKLNDSIL-----EGTDCKLSVCRAQKKSERSAELKRKYEALKQER-----------V 337
Query: 160 QFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIE 219
Q + +N+ +V N++ + +++ F G + + + VD++G S+GF +
Sbjct: 338 QRYQGVNL--------YVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVC 389
Query: 220 YDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDK 254
++ P EA A++ + +M+ + + V + + D+
Sbjct: 390 FEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDR 424
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFD 234
+F+ NLD D + + F + G + + +A D +GNS+G+ + ++ A AI +
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 235 KQMLYERRMTV 245
+L ++++ V
Sbjct: 207 GMLLSDKKVYV 217
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 46.0 bits (104), Expect = 6e-05
Identities = 44/215 (20%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
+FV N +L +F K G++ ++TD GK +G G V F + +A +A+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFS-KFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAV--- 295
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSL 159
+LN L G + ++ R Q + R+ + + + R +
Sbjct: 296 --EKLNDSIL-----EGTDCKLSVCRAQKKSERSAELKRKYEALKQER-----------V 337
Query: 160 QFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIE 219
Q + +N+ +V N++ + +++ F G + + + VD++G S+GF +
Sbjct: 338 QRYQGVNL--------YVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVC 389
Query: 220 YDHPVEAVQAISMFDKQMLYERRMTVRMDRGVTDK 254
++ P EA A++ + +M+ + + V + + D+
Sbjct: 390 FEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDR 424
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFD 234
+F+ NLD D + + F + G + + +A D +GNS+G+ + ++ A AI +
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 235 KQMLYERRMTV 245
+L ++++ V
Sbjct: 207 GMLLSDKKVYV 217
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 46.0 bits (104), Expect = 6e-05
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
L VSNIP+ FR +LK +F EK G V+ VE++ ++ G ++G G V + ++A +
Sbjct: 155 LHVSNIPFRFRDPDLKTMF-EKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQEL 212
Query: 100 HRYELNGRKLVLKEETGNERRMHTSR 125
H + GRK+ + T R+H+ +
Sbjct: 213 HGSMIEGRKIEVNCATA---RVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 46.0 bits (104), Expect = 6e-05
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
L VSNIP+ FR +LK +F EK G V+ VE++ ++ G ++G G V + ++A +
Sbjct: 155 LHVSNIPFRFRDPDLKTMF-EKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQEL 212
Query: 100 HRYELNGRKLVLKEETGNERRMHTSR 125
H + GRK+ + T R+H+ +
Sbjct: 213 HGSMIEGRKIEVNCATA---RVHSKK 235
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 45.6 bits (103), Expect = 8e-05
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQAIS 231
+ V+V N+D+K+ ++I+E F + GKV + + DK G + FA +E+ +E+VQ
Sbjct: 46 RSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEF-QKLESVQLAL 104
Query: 232 MFDKQMLYERRMTVRMDR 249
+ M R++ V + R
Sbjct: 105 VLSGTMFRNRKIMVTLKR 122
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 45.2 bits (102), Expect = 1e-04
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFD 234
V V NL K D+ I+++F+ G++ IDL VD + +RGFA I + + +A ++ +
Sbjct: 129 VLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLN 188
Query: 235 KQMLYER--RMTVRMD 248
L R R++++ +
Sbjct: 189 NFELAGRCIRLSIKQE 204
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
+ V N+ + ++D+F E G + ++L D + + RG + F N + +K+ +
Sbjct: 129 VLVENLHPKIDEKMIRDIF-ESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQL 187
Query: 100 HRYELNGR--KLVLKEET 115
+ +EL GR +L +K+E+
Sbjct: 188 NNFELAGRCIRLSIKQES 205
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 45.2 bits (102), Expect = 1e-04
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFD 234
V V NL K D+ I+++F+ G++ IDL VD + +RGFA I + + +A ++ +
Sbjct: 274 VLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLN 333
Query: 235 KQMLYER--RMTVRMD 248
L R R++++ +
Sbjct: 334 NFELAGRCIRLSIKQE 349
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
+ V N+ + ++D+F E G + ++L D + + RG + F N + +K+ +
Sbjct: 274 VLVENLHPKIDEKMIRDIF-ESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQL 332
Query: 100 HRYELNGR--KLVLKEET 115
+ +EL GR +L +K+E+
Sbjct: 333 NNFELAGRCIRLSIKQES 350
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPVEAVQAISMF 233
+++ L Y + + VF G+V NI+L DKD G S+GFA + Y + A+ F
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 234 DKQMLYERRMTV 245
+ L++R + V
Sbjct: 100 NGISLHKRMIRV 111
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 44.4 bits (100), Expect = 2e-04
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISM 232
+KV+V NL + +++++F G+++ +D+ K G FA +E++ +A A+
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 233 FDKQMLYERRMTVRMDRGVTDKG 255
D RR+ V RGV +G
Sbjct: 66 RDGYEFDGRRIRVEFTRGVGPRG 88
Score = 40.3 bits (90), Expect = 0.003
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
++V N+P + R E++D+F K G + YV++ SG+ VEF + + A+
Sbjct: 11 VYVGNLPGDVREKEVEDIF-HKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDD 137
YE +GR++ ++ G R RP G + D
Sbjct: 67 DGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGD 104
Score = 34.7 bits (76), Expect = 0.14
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKAL 96
+ V +P W +LKD ++ GDV Y ++ D G G+VEFT E +K A+
Sbjct: 125 VIVEGLPPTGSWQDLKDHMRD-AGDVCYADVARD------GTGVVEFTRYEDVKYAV 174
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 44.4 bits (100), Expect = 2e-04
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISM 232
+KV+V NL + +++++F G+++ +D+ K G FA +E++ +A A+
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 233 FDKQMLYERRMTVRMDRGVTDKG 255
D RR+ V RGV +G
Sbjct: 66 RDGYEFDGRRIRVEFTRGVGPRG 88
Score = 41.5 bits (93), Expect = 0.001
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
++V N+P + R E++D+F K G + YV++ SG+ VEF + + A+
Sbjct: 11 VYVGNLPGDVREKEVEDIF-HKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDD 137
YE +GR++ ++ G R + RP G + D
Sbjct: 67 DGYEFDGRRIRVEFTRGVGPRGPSGRPLQDGGDHRGGD 104
Score = 34.7 bits (76), Expect = 0.14
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKAL 96
+ V +P W +LKD ++ GDV Y ++ D G G+VEFT E +K A+
Sbjct: 125 VIVEGLPPTGSWQDLKDHMRD-AGDVCYADVARD------GTGVVEFTRYEDVKYAV 174
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
+FV NI + ++ + E G+VA + + +GK +G G FT+ E +AL ++
Sbjct: 49 VFVGNISDKCSDEFIRKILNE-CGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRIL 107
Query: 100 HRYELNGRKLVLK--EETGNERRMHTSRPQHREGR 132
H + L +KL +K E+ ++ R + + R+G+
Sbjct: 108 HEFHLGDKKLTVKPDEKVRDDLRKNAIENRKRQGK 142
Score = 34.7 bits (76), Expect = 0.14
Identities = 20/86 (23%), Positives = 38/86 (44%)
Query: 168 QPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAV 227
Q P VFV N+ K I+++ G V + +G +GF + +
Sbjct: 42 QKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTL 101
Query: 228 QAISMFDKQMLYERRMTVRMDRGVTD 253
+A+ + + L ++++TV+ D V D
Sbjct: 102 RALRILHEFHLGDKKLTVKPDEKVRD 127
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
+FV NI + ++ + E G+VA + + +GK +G G FT+ E +AL ++
Sbjct: 49 VFVGNISDKCSDEFIRKILNE-CGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRIL 107
Query: 100 HRYELNGRKLVLK--EETGNERRMHTSRPQHREGR 132
H + L +KL +K E+ ++ R + + R+G+
Sbjct: 108 HEFHLGDKKLTVKPDEKVRDDLRKNAIENRKRQGK 142
Score = 34.7 bits (76), Expect = 0.14
Identities = 20/86 (23%), Positives = 38/86 (44%)
Query: 168 QPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAV 227
Q P VFV N+ K I+++ G V + +G +GF + +
Sbjct: 42 QKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTL 101
Query: 228 QAISMFDKQMLYERRMTVRMDRGVTD 253
+A+ + + L ++++TV+ D V D
Sbjct: 102 RALRILHEFHLGDKKLTVKPDEKVRD 127
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 98
+FV N+P+E L F ++G V V ++ D D+GK +G V F ++ AL
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL-S 306
Query: 99 MHRYELNGRKLVLKE--ETGNERRMHTSRPQHREGRNNRDD 137
M ++ R L + + + G+ ++ T++ + G+ N+++
Sbjct: 307 METIKMEKRDLRITKVMKKGHLTKIQTAKKRTSHGKKNQNE 347
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 43.6 bits (98), Expect = 3e-04
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
L VS++P + EL +F +K ++ G ++G G V F N + AL M
Sbjct: 158 LHVSSVPDDMADAELYRIF-DKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEM 216
Query: 100 HRYELNGRKLVLK-EETGNERRMHTSRPQHREGRNN--RDDKDNWGINKPREPENLNTY 155
HR ++ G +++LK + ER Q + RN+ RD+K N P+ Y
Sbjct: 217 HRTKVGGCRIILKLAGSRGERLDRGESRQFKSQRNDRRRDEKSGQYRNGTAVPQQTQVY 275
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 43.6 bits (98), Expect = 3e-04
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGN--SRGFAVIEYDHPVEAVQAI 230
K+V + NL + ++E+F + G ++N+DL D+ N RG+ +EYD+ +A ++I
Sbjct: 133 KRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSI 192
Query: 231 SMFDKQMLYERRMTVRMDRG 250
D + + V M G
Sbjct: 193 KHMDGGQIDGMAVHVEMTIG 212
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 42.7 bits (96), Expect = 5e-04
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
L VSNIP+++R +L +F EKVG V VE++ ++ G ++G G V N + +A
Sbjct: 102 LHVSNIPFKYREPDLTAMF-EKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEF 159
Query: 100 HRYELNGRKLVLKEETGNERRMHTSR 125
+ + GR++ + T +R+H +
Sbjct: 160 NGTTIEGRRVEVNLAT---QRVHNKK 182
Score = 35.5 bits (78), Expect = 0.081
Identities = 17/75 (22%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISM 232
+++ V+N+ +K + + +F+ G V ++++ ++ G S+GF + +P +A +A +
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAE 158
Query: 233 FDKQMLYERRMTVRM 247
F+ + RR+ V +
Sbjct: 159 FNGTTIEGRRVEVNL 173
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 42.7 bits (96), Expect = 5e-04
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
L VSNIP+++R +L +F EKVG V VE++ ++ G ++G G V N + +A
Sbjct: 102 LHVSNIPFKYREPDLTAMF-EKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEF 159
Query: 100 HRYELNGRKLVLKEETGNERRMHTSR 125
+ + GR++ + T +R+H +
Sbjct: 160 NGTTIEGRRVEVNLAT---QRVHNKK 182
Score = 35.5 bits (78), Expect = 0.081
Identities = 17/75 (22%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISM 232
+++ V+N+ +K + + +F+ G V ++++ ++ G S+GF + +P +A +A +
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAE 158
Query: 233 FDKQMLYERRMTVRM 247
F+ + RR+ V +
Sbjct: 159 FNGTTIEGRRVEVNL 173
>Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 42.3 bits (95), Expect = 7e-04
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVD-KDGNSRGFAVIEYDHPVEAVQAI 230
VFV N+ +A + + + F GK++NI L +D + G +G+A++EY+ EA +AI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.5 bits (93), Expect = 0.001
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 98
++V N P++ +L + F + G+V+ V ++ D ++G+ RG VEFT A ++A+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQ-AGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 99 MHRYELNGRKL 109
+ + NGR L
Sbjct: 65 FNGVDFNGRAL 75
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPVEAVQAISMF 233
V+V N ++ + + F AG V N+ + D++ G RGFA +E+ A +A+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 234 D 234
+
Sbjct: 66 N 66
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 41.5 bits (93), Expect = 0.001
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQAIS 231
K V+V N+DY A +I++ F G V + + D+ G+ +GFA +E+ A++
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALA 137
Query: 232 MFDKQMLYERRMTVRMDRGVTDK 254
M D + R +++D T+K
Sbjct: 138 MTDSLL---RGRQIKVDPKRTNK 157
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPVEAVQAISMF 233
V+V N+ Y+ + +I F G V N+ + D++ G RGFA +E+ A +A+
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 234 DKQMLYERRMTV 245
+ R + V
Sbjct: 68 NGVAFNGRNLRV 79
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 98
++V N+PY+ E+ + F VG V V ++ D ++G+ RG VEF+ ++A+
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAA-VGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 99 MHRYELNGRKL 109
++ NGR L
Sbjct: 67 LNGVAFNGRNL 77
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 98
++V N P++ EL + F +G + V ++ D ++G+ RG +EF + ++A+
Sbjct: 7 VYVGNAPFQTTEEELGNFFSS-IGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 99 MHRYELNGRKL 109
M+ E NGR L
Sbjct: 66 MNGAEFNGRPL 76
Score = 37.5 bits (83), Expect = 0.020
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPVEAVQAISMF 233
V+V N ++ + ++ F G++ N+ + D++ G RGFA IE+ A +A+
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 234 DKQMLYERRMTVRM 247
+ R + V +
Sbjct: 67 NGAEFNGRPLRVNL 80
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPVEAVQAIS 231
K VF+ NL Y + IKE GK+ + KD G+S+G A + + P+EA I
Sbjct: 263 KVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIE 322
Query: 232 MFDKQMLYERRM 243
+ ++ + R+
Sbjct: 323 GVEDGVIIDNRL 334
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.5 bits (88), Expect = 0.005
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQAISMF 233
+FV L+ ++ +F GK+ N ++ D+ G+S +A IE+D+ QA
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 234 DKQMLYERRMTVRMDRGVT 252
D ++ +RR+ V + V+
Sbjct: 303 DNVLIDDRRIHVDFSQSVS 321
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.5 bits (88), Expect = 0.005
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQAISMF 233
+FV L+ ++ +F GK+ N ++ D+ G+S +A IE+D+ QA
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 234 DKQMLYERRMTVRMDRGVT 252
D ++ +RR+ V + V+
Sbjct: 303 DNVLIDDRRIHVDFSQSVS 321
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 39.5 bits (88), Expect = 0.005
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQAISMF 233
+FV L+ ++ +F GK+ N ++ D+ G+S +A IE+D+ QA
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 234 DKQMLYERRMTVRMDRGVT 252
D ++ +RR+ V + V+
Sbjct: 234 DNVLIDDRRIHVDFSQSVS 252
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 38.7 bits (86), Expect = 0.009
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAIS 231
KK+F+ L + + +++ +F G++ + + DG S+G A ++Y H ++A AIS
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAIS 182
Score = 32.3 bits (70), Expect = 0.76
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 167 VQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVE 225
V+ P K+FV + ++ ++ +F+ GK+ + DK G +G A + Y H
Sbjct: 23 VKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDS 82
Query: 226 AVQA-ISMFDKQMLYERRMTVRMDRGVTD 253
AV+ ++ D++ L +++ TD
Sbjct: 83 AVRCQATLHDQKTLPGMNRAMQVKPADTD 111
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
LF+ + + L+++F K G + +L D GK+RGC V FTN A M
Sbjct: 144 LFIGQLSKKHNEENLREIFA-KFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 100 H 100
H
Sbjct: 203 H 203
Score = 38.3 bits (85), Expect = 0.012
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQA 229
+K+F+ L K ++ ++E+F G + + + D+DG SRG A + + + AV A
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVA 198
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
LF+ + + L+++F K G + +L D GK+RGC V FTN A M
Sbjct: 144 LFIGQLSKKHNEENLREIFA-KFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 100 H 100
H
Sbjct: 203 H 203
Score = 38.3 bits (85), Expect = 0.012
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQA 229
+K+F+ L K ++ ++E+F G + + + D+DG SRG A + + + AV A
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVA 198
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 38.7 bits (86), Expect = 0.009
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAIS 231
KK+F+ L + + +++ +F G++ + + DG S+G A ++Y H ++A AIS
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAIS 182
Score = 32.3 bits (70), Expect = 0.76
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 167 VQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVE 225
V+ P K+FV + ++ ++ +F+ GK+ + DK G +G A + Y H
Sbjct: 23 VKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDS 82
Query: 226 AVQA-ISMFDKQMLYERRMTVRMDRGVTD 253
AV+ ++ D++ L +++ TD
Sbjct: 83 AVRCQATLHDQKTLPGMNRAMQVKPADTD 111
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 171 LVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQA 229
++ +++V ++ ++ + ++ F G +++I+++ D G+ + FA +EY+ P A+ A
Sbjct: 100 IMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLA 159
Query: 230 ISMFDKQMLYERRMTV 245
+ QML R + V
Sbjct: 160 QESMNGQMLGGRNLKV 175
Score = 28.7 bits (61), Expect = 9.3
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDS-GKARGCGIVEFTNTEAMKKALFV 98
++V +I +E R L+ F + G + + + D + G + VE+ EA A
Sbjct: 104 IYVGSISFEIREDMLRRAF-DPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 99 MHRYELNGRKLVLKEETGNERRMHTSRPQ 127
M+ L GR L + E R+ + PQ
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQ 191
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 171 LVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQA 229
++ +++V ++ ++ + ++ F G +++I+++ D G+ + FA +EY+ P A+ A
Sbjct: 100 IMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLA 159
Query: 230 ISMFDKQMLYERRMTV 245
+ QML R + V
Sbjct: 160 QESMNGQMLGGRNLKV 175
Score = 28.7 bits (61), Expect = 9.3
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDS-GKARGCGIVEFTNTEAMKKALFV 98
++V +I +E R L+ F + G + + + D + G + VE+ EA A
Sbjct: 104 IYVGSISFEIREDMLRRAF-DPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 99 MHRYELNGRKLVLKEETGNERRMHTSRPQ 127
M+ L GR L + E R+ + PQ
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQ 191
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 38.7 bits (86), Expect = 0.009
Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 171 LVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQA 229
++ +++V ++ ++ + ++ F G +++I+++ D G+ + FA +EY+ P A+ A
Sbjct: 100 IMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLA 159
Query: 230 ISMFDKQMLYERRMTV 245
+ QML R + V
Sbjct: 160 QESMNGQMLGGRNLKV 175
Score = 28.7 bits (61), Expect = 9.3
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDS-GKARGCGIVEFTNTEAMKKALFV 98
++V +I +E R L+ F + G + + + D + G + VE+ EA A
Sbjct: 104 IYVGSISFEIREDMLRRAF-DPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 99 MHRYELNGRKLVLKEETGNERRMHTSRPQ 127
M+ L GR L + E R+ + PQ
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQ 191
>Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 38.3 bits (85), Expect = 0.012
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVM 99
L + N+ + W ++KD ++ + Y E + +A IV FT+ + ++ A+ +
Sbjct: 114 LVIDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQA----IVCFTSHDDLRDAMNKL 169
Query: 100 HRYELNGRKLVLKEETGNERRMHTSRPQHR 129
+LNGRKL +ET + R + R + R
Sbjct: 170 QGEDLNGRKLKCTDETRDRSRSRSPRRRSR 199
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 38.3 bits (85), Expect = 0.012
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPVEAVQAISMF 233
VFV +L + D K++E F+ G V + + D + S+G+ + Y EA +AI
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 234 DKQMLYERRMTVRMDRGVTDKGELRLP 260
+ Q L R T+R + G+ P
Sbjct: 84 NGQWL--GRRTIRTNWATRKPGDQEKP 108
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 38.3 bits (85), Expect = 0.012
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPVEAVQAISMF 233
VFV +L + D K++E F+ G V + + D + S+G+ + Y EA +AI
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 234 DKQMLYERRMTVRMDRGVTDKGELRLP 260
+ Q L R T+R + G+ P
Sbjct: 94 NGQWL--GRRTIRTNWATRKPGDQEKP 118
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 38.3 bits (85), Expect = 0.012
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPVEAVQAISMF 233
VFV +L + D K++E F+ G V + + D + S+G+ + Y EA +AI
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 234 DKQMLYERRMTVRMDRGVTDKGELRLP 260
+ Q L R T+R + G+ P
Sbjct: 197 NGQWL--GRRTIRTNWATRKPGDQEKP 221
Score = 36.7 bits (81), Expect = 0.035
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISM 232
+ ++V NLD + I +F G V + D G++ +A +E+ +A QA+
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD--GSNDPYAFVEFSDHGQASQALQT 103
Query: 233 FDKQMLYERRMTV 245
+K++L +R M V
Sbjct: 104 MNKRLLLDREMKV 116
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 38.3 bits (85), Expect = 0.012
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKD-GNSRGFAVIEYDHPVEAVQAISMF 233
VFV +L + D K++E F+ G V + + D + S+G+ + Y EA +AI
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 234 DKQMLYERRMTVRMDRGVTDKGELRLP 260
+ Q L R T+R + G+ P
Sbjct: 165 NGQWL--GRRTIRTNWATRKPGDQEKP 189
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 37.5 bits (83), Expect = 0.020
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 174 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMF 233
KV+V L A +++E+F G++R + +A GFA +EYD +A A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVA----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 234 DKQMLYERRMTVRMDRGVTDKGELRLPEGLKGIGMGLGPNGEPLR 278
D + R V + G G R G G G G G + P R
Sbjct: 60 DGSRICGVRARVELSTGQRRGGGGR-GGGFGGRGGG-GRDRSPYR 102
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 36.7 bits (81), Expect = 0.035
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 174 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMF 233
KV+V L A +++E+F G++R + +A GFA +EYD +A A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVA----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 234 DKQMLYERRMTVRMDRG 250
D + R V + G
Sbjct: 60 DGSRICGVRARVELSTG 76
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 36.7 bits (81), Expect = 0.035
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 174 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMF 233
KV+V L A +++E+F G++R + +A GFA +EYD +A A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVA----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 234 DKQMLYERRMTVRMDRG 250
D + R V + G
Sbjct: 60 DGSRICGVRARVELSTG 76
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.061
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNI-DLAVDKD-GNSRGFAVIEYDHPVEAVQAISM 232
+FV NLD + D+ + + F G + + + D D G S+GFA I + + A+
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 233 FDKQMLYERRMTVRMDRGVTDKGE 256
+ Q L R +TV KGE
Sbjct: 162 MNGQFLCNRAITVSYAFKRDSKGE 185
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.061
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNI-DLAVDKD-GNSRGFAVIEYDHPVEAVQAISM 232
+FV NLD + D+ + + F G + + + D D G S+GFA I + + A+
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 233 FDKQMLYERRMTVRMDRGVTDKGE 256
+ Q L R +TV KGE
Sbjct: 172 MNGQFLCNRAITVSYAFKRDSKGE 195
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 35.5 bits (78), Expect = 0.081
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSR-GFAVIEYDHPVEAVQAISMF 233
++V NL Y + ++ E+F AG VR + + +D+ + GF +EY +A A+
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 234 DKQMLYERRMTVRMDRGVTDKGELRLPEGLKGIGMGLGPNGEPLRDVAR 282
Q + RM R+ R D G ++G G G +G +RD R
Sbjct: 96 --QNISNTRMDDRVIRADWDAG------FIEGRQYGRGKHGGQVRDEYR 136
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.081
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQAIS 231
K VF+ N+D+ + +I+E FK G++ + DK + FA IE+D A+
Sbjct: 55 KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALV 114
Query: 232 M 232
M
Sbjct: 115 M 115
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 34.3 bits (75), Expect = 0.19
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDHPVEAVQAIS 231
K VF+ N+D+ + +++E FK G + + DK + FA IE+D A+
Sbjct: 61 KSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALV 120
Query: 232 M 232
M
Sbjct: 121 M 121
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.19
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNS-RGFAVIEYDHPVEAVQAIS 231
KKVFV L + ++ F+ GKV +I+ DK + R FA I ++ A +A S
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 232 MFDKQMLYERRMTVR--MDRGVTDKG-ELRLPEGLKGIGMGLGPN 273
KQ R V+ + +G G + R+P G +G+ G G N
Sbjct: 170 Q-TKQTFGTRECDVKKAVPQGKRFPGAQGRMPGG-RGMYGGRGGN 212
Score = 33.9 bits (74), Expect = 0.25
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 98
+FV I E +L F + G+VA ++ D +G++RG VEFT E K AL
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQ-YGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLAL-A 88
Query: 99 MHRYELNGRKLVLKEETGNERR 120
+ G+ + +K E +
Sbjct: 89 AREQTIKGKSVEVKPAKSRENK 110
Score = 32.7 bits (71), Expect = 0.57
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEY 220
KK+FV + + + + F G+V + D+ +G SRGFA +E+
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 34.3 bits (75), Expect = 0.19
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNS-RGFAVIEYDHPVEAVQAIS 231
KKVFV L + ++ F+ GKV +I+ DK + R FA I ++ A +A S
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 232 MFDKQMLYERRMTVR--MDRGVTDKG-ELRLPEGLKGIGMGLGPN 273
KQ R V+ + +G G + R+P G +G+ G G N
Sbjct: 170 Q-TKQTFGTRECDVKKAVPQGKRFPGAQGRMPGG-RGMYGGRGGN 212
Score = 33.9 bits (74), Expect = 0.25
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFV 98
+FV I E +L F + G+VA ++ D +G++RG VEFT E K AL
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQ-YGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLAL-A 88
Query: 99 MHRYELNGRKLVLKEETGNERR 120
+ G+ + +K E +
Sbjct: 89 AREQTIKGKSVEVKPAKSRENK 110
Score = 32.7 bits (71), Expect = 0.57
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEY 220
KK+FV + + + + F G+V + D+ +G SRGFA +E+
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 33.1 bits (72), Expect = 0.43
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 174 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMF 233
++FV + +++E F+ V+++ + DG S+G+ I ++ +A + +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRKLT 126
Query: 234 DKQMLYERR 242
KQ+ + R
Sbjct: 127 PKQLEFRSR 135
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 33.1 bits (72), Expect = 0.43
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 174 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMF 233
++FV + +++E F+ V+++ + DG S+G+ I ++ +A + +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRKLT 127
Query: 234 DKQMLYERR 242
KQ+ + R
Sbjct: 128 PKQLEFRSR 136
>AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 32.7 bits (71), Expect = 0.57
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 63 GDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFVMHRYELNGRKL 109
GDV + + D +SGK RG G VEF E A+ M+ EL G+ +
Sbjct: 35 GDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTI 82
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVD-KDGNSRGFAVIEYDHPVEAVQAIS 231
+ ++V + + F G V I + +D + G RGF +E+D +A AI
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAID 70
Query: 232 MFDKQMLYERRMTVRMDR 249
++ L+ + + V R
Sbjct: 71 NMNESELFGKTIRVNFAR 88
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 32.7 bits (71), Expect = 0.57
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGN-SRGFAVIEYDHPVEAVQAISMF 233
VFV +L + D K++E F G+V + D + N +G+ + Y +A +AI
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 234 DKQMLYERRMTVRMDRGVTDKGELRLPEGLKGIGMGLGPNG 274
+ L R T+R + E G +G G G G
Sbjct: 194 NGAWL--GRRTIRTNWATRKPDEDGERGGDRGDRRGGGGGG 232
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 32.7 bits (71), Expect = 0.57
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 169 PPLVKKV-FVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAV 227
PP V ++ ++ NL YK ++ E+F G VR I V +RG A + Y+ +A
Sbjct: 14 PPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQI--RVGNTAETRGTAFVVYEDIFDAK 71
Query: 228 QA 229
A
Sbjct: 72 TA 73
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.76
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 174 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMF 233
++FV NL + + ++KE+F G + L + +GFA + D A A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 234 DKQMLYERRMTVR 246
D ++++ R++ VR
Sbjct: 171 DGRIIHGRQVRVR 183
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVA 66
LFV N+P E + TELK+LF GD+A
Sbjct: 118 LFVGNLPNEVKETELKELFSPH-GDIA 143
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.76
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 174 KVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMF 233
++FV NL + + ++KE+F G + L + +GFA + D A A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 234 DKQMLYERRMTVR 246
D ++++ R++ VR
Sbjct: 171 DGRIIHGRQVRVR 183
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVA 66
LFV N+P E + TELK+LF GD+A
Sbjct: 118 LFVGNLPNEVKETELKELFSPH-GDIA 143
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYD 221
KKVF+ L + +K+ F+ GKV + L DK RGF + +D
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 42 VSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVMHR 101
V+N+P+ + EL + F EKV D G A + EF++ MK++ + R
Sbjct: 610 VTNVPFRMKDEELLEWFSEKVRPAKLTRTFYSD-GNASDRWVAEFSSESLMKRSFGI--R 666
Query: 102 YELNGRKLVLK 112
GR L L+
Sbjct: 667 TLCTGRTLRLR 677
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 173 KKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYD 221
KKVF+ L + +K+ F+ GKV + L DK RGF + +D
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
>Z66565-7|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 384 GIGNNEMNSNVLTSGVMGGNQMNSGPLSNISGTSRPLGVSVPNQGYGRDTG 434
G N +N G GGN N+GP G +RP G GYGR G
Sbjct: 45 GYNNGGGFNNYGNGGGFGGNNYNNGPPPFDGGYNRPYG-GGGGGGYGRPQG 94
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 31.1 bits (67), Expect = 1.7
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 42 VSNIPYEFRWTELKDLFKEKVGDVAYVELLTDD-SGKARGCGIVEFTNTEAMKKALFVMH 100
V+N+P E EL+DLF K+G V + + D +G +G V F + + +A+ ++
Sbjct: 180 VTNLPQEMNEDELRDLF-GKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
Query: 101 RYELNGRKLVLKEE 114
++ +VLK E
Sbjct: 239 --DIRMYHMVLKVE 250
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAISMFD 234
+ V +D+K ++ F+ G V ++ DGNS+GF + E + +++
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVLAI-P 233
Query: 235 KQMLYERRMTVRMDRGVTDKG 255
+ M+ RR V++ G +G
Sbjct: 234 QHMIDGRRCDVKVPDGRDKQG 254
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVA 66
LFV N+P E + TELK+LF GD+A
Sbjct: 118 LFVGNLPNEVKETELKELFSPH-GDIA 143
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 42 VSNIPYEFRWTELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKALFVMHR 101
V N+ W +LKD + + + Y E + K ++ F +K+ +
Sbjct: 133 VENLSSRISWQDLKDQVRRQGVEPTYAE-----AHKRPNEALLCFATPSDLKRCIEKCDG 187
Query: 102 YELNGRKLVLKEETGNERRMHTSRPQHREGRNNRD 136
+LNGRK+ + +++ R S + R +RD
Sbjct: 188 MDLNGRKIKMIDDSQAGRSRSRSNSRSRSRSRSRD 222
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 167 VQPPLVKKVFVANLD---YKADQAKIKEVFKMAGKVRNIDLAVDK-DGNSRGFAVIEYDH 222
VQ +KK++V + + + ++ F+ G V I +A ++ GN +G+A + +D+
Sbjct: 23 VQKKQLKKIYVVKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDN 82
Query: 223 PVEAVQAISMFDKQMLYERRM 243
A A + +++E+R+
Sbjct: 83 KAVAEIAAESMNGYLMFEQRL 103
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.7 bits (66), Expect = 2.3
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 171 LVKKVFVANLDYKADQAKIKEVFKMAGKVR------NIDLAVDKD-GNSRGFAVIEYDHP 223
L + VFV + A++A I +VF G + I + D++ G +G +I +
Sbjct: 199 LKETVFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITFVDA 258
Query: 224 VEAVQAISMFDKQML--YERRMTVRMDRGVTDKGELRLPEGLKGIGMGLGPNG 274
A QAI+M++ Q M++ + + D G R G +G G G G G
Sbjct: 259 SAAQQAITMYNGQPFPGGSSPMSISLAKFRADAGGERGGRGGRG-GFGGGRGG 310
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 30.7 bits (66), Expect = 2.3
Identities = 30/147 (20%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 83 IVEFTNTEAMKKALFVMHRYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDNWG 142
+V +T + +K L + + G +L+++ G +R QH G +++ + +
Sbjct: 68 VVRYTLMDRLKSVLGKRVQCDPAG---ILRDQEGKYIPDRFNRAQH--GADSKREGGSGS 122
Query: 143 INKPREPENLNTYGLSLQFLESINVQPPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNI 202
N+ R + +T+ L E+ + +FV N+ + +I+ VF+ GKV +
Sbjct: 123 GNRGRPTKEPSTWRLKQDDDEA-------TRTLFVGNMPSDVKEREIRHVFEEHGKVEEV 175
Query: 203 DLAVDKDGNSRGFAVIEYDHPVEAVQA 229
D+ + ++ +A + + +A+QA
Sbjct: 176 DIKTPINTDA-AYAFVMFQTVDQAIQA 201
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 30.3 bits (65), Expect = 3.1
Identities = 25/120 (20%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 110 VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSLQFLESINVQP 169
+L+++ G +R QH G +++ + + N+ R + +T+ L E+
Sbjct: 115 ILRDQEGKYIPDRFNRAQH--GADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEA----- 167
Query: 170 PLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQA 229
+ +FV N+ + +I+ VF+ GKV +D+ + ++ +A + + +A+QA
Sbjct: 168 --TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDA-AYAFVMFQTVDQAIQA 224
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 30.3 bits (65), Expect = 3.1
Identities = 25/120 (20%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 110 VLKEETGNERRMHTSRPQHREGRNNRDDKDNWGINKPREPENLNTYGLSLQFLESINVQP 169
+L+++ G +R QH G +++ + + N+ R + +T+ L E+
Sbjct: 115 ILRDQEGKYIPDRFNRAQH--GADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEA----- 167
Query: 170 PLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQA 229
+ +FV N+ + +I+ VF+ GKV +D+ + ++ +A + + +A+QA
Sbjct: 168 --TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDA-AYAFVMFQTVDQAIQA 224
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 40 LFVSNIPYEFRWTELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKA 95
+FV +PY L + F E+ GD+ ++TD ++ K+RG G V + + ++A
Sbjct: 37 IFVGGLPYHTSDKTLHEYF-EQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERA 92
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 175 VFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQAI 230
+FV NL D + ++F G + N+ + D +G+A + + EA A+
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAM 431
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 101 RYELNGRKLVLKEETGNERRMHTSRPQHREGRNNRDDKDN 140
R E ++ + ERR H SR HR ++RD +D+
Sbjct: 257 RKERREKRAEAATTSDTERRRHRSRSPHRSSHDSRDSRDS 296
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 29.5 bits (63), Expect = 5.3
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 53 ELKDLFKEKVGDVAYVELLTDDSGKARGCGIVEFTNTEAMKKAL-FVMHRYELNGRKLVL 111
+L D F + GD+ + +LT+ +GC +EFT EA ++A ++ + G++L +
Sbjct: 254 DLNDFFYQ-YGDIRCLRVLTE-----KGCAFIEFTTREAAERAAERSFNKTFIKGKRLTI 307
Query: 112 K 112
+
Sbjct: 308 R 308
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 29.5 bits (63), Expect = 5.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 169 PPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGN---SRGFAVIEYDHPVE 225
PP ++K+F+ L + ++ F G V +D V +D N SRGF + +
Sbjct: 45 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPV--VDAIVIRDPNTKHSRGFGFVTFASIFS 102
Query: 226 AVQAIS 231
A A++
Sbjct: 103 AESAMN 108
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 29.5 bits (63), Expect = 5.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 169 PPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGN---SRGFAVIEYDHPVE 225
PP ++K+F+ L + ++ F G V +D V +D N SRGF + +
Sbjct: 65 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPV--VDAIVIRDPNTKHSRGFGFVTFASIFS 122
Query: 226 AVQAIS 231
A A++
Sbjct: 123 AESAMN 128
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 29.5 bits (63), Expect = 5.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 169 PPLVKKVFVANLDYKADQAKIKEVFKMAGKVRNIDLAVDKDGN---SRGFAVIEYDHPVE 225
PP ++K+F+ L + ++ F G V +D V +D N SRGF + +
Sbjct: 66 PPQLRKLFIGGLSHDTTDEQLGNYFSQWGPV--VDAIVIRDPNTKHSRGFGFVTFASIFS 123
Query: 226 AVQAIS 231
A A++
Sbjct: 124 AESAMN 129
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.1 bits (62), Expect = 7.1
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 41 FVSNIPYEFRWTELKDLFKE-KVGDVAY----VELLTD-DSGKARGCGIVEFTNTEAMKK 94
F+ +PY+ T+++ + K K D + L+ D DSG +G V F N + M
Sbjct: 9 FIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNT 68
Query: 95 ALFVMHRYELNGRKLVLKEETGNERRMHTSRPQHREGR-NNRDDKDNWG 142
A+ ++ + R VLK ++R + R R GR N D+ G
Sbjct: 69 AISGLNGADFGNR--VLKVNRA-QQRDRSDRGGGRGGRGGNFGDRGGRG 114
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 381 ASLGIGNNEMNSNVLTSGVMGGNQMNSGPLSNISGTSRPL-GVSVPNQGYGRDTG 434
A G GNN+ G GGNQ N G +G+ P G S QG+G + G
Sbjct: 100 APQGFGNNQQ-------GGFGGNQGNQGGFGGRTGSPPPFGGFSGAPQGFGGNQG 147
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 381 ASLGIGNNEMNSNVLTSGVMGGNQMNSGPLSNISGTSRPL-GVSVPNQGYGRDTG 434
A G GNN+ G GGNQ N G +G+ P G S QG+G + G
Sbjct: 121 APQGFGNNQQ-------GGFGGNQGNQGGFGGRTGSPPPFGGFSGAPQGFGGNQG 168
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 381 ASLGIGNNEMNSNVLTSGVMGGNQMNSGPLSNISGTSRPL-GVSVPNQGYGRDTG 434
A G GNN+ G GGNQ N G +G+ P G S QG+G + G
Sbjct: 106 APQGFGNNQQ-------GGFGGNQGNQGGFGGRTGSPPPFGGFSGAPQGFGGNQG 153
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 9.3
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 53 ELKDLFKEKVGDVAYVELLTD-DSGKARGCGIVEFTNTEAMKKALFVMHRYELNGRKLVL 111
+L+D+F E G++ +L+ D SG +RG G + F E A + +L+G K +
Sbjct: 91 DLRDVFGE-FGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHK--I 147
Query: 112 KEETGNERRMHTSRP 126
+ + +R H+ P
Sbjct: 148 RVDFSLTKRGHSPTP 162
>Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical
protein D2089.4b protein.
Length = 453
Score = 28.7 bits (61), Expect = 9.3
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 171 LVKKVFVANL-DYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQA 229
L + V+NL + K + +F + G V + + +K N A+I+Y P +A A
Sbjct: 257 LTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDN----ALIQYSEPQQAQLA 312
Query: 230 ISMFDKQMLYERRMTV 245
++ DK ++R + V
Sbjct: 313 LTHLDKVKWHDRLIRV 328
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 28.7 bits (61), Expect = 9.3
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 171 LVKKVFVANL-DYKADQAKIKEVFKMAGKVRNIDLAVDKDGNSRGFAVIEYDHPVEAVQA 229
L + V+NL + K + +F + G V + + +K N A+I+Y P +A A
Sbjct: 419 LTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDN----ALIQYSEPQQAQLA 474
Query: 230 ISMFDKQMLYERRMTV 245
++ DK ++R + V
Sbjct: 475 LTHLDKVKWHDRLIRV 490
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.135 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,079,600
Number of Sequences: 27539
Number of extensions: 369949
Number of successful extensions: 955
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 826
Number of HSP's gapped (non-prelim): 166
length of query: 470
length of database: 12,573,161
effective HSP length: 84
effective length of query: 386
effective length of database: 10,259,885
effective search space: 3960315610
effective search space used: 3960315610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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