Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001541-TA|BGIBMGA001541-PA|IPR013026|Tetratricopeptide
region, IPR001440|Tetratricopeptide TPR_1
(154 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 6e-11
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 62 3e-10
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 58 4e-09
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 57 6e-09
SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10) 45 3e-05
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-05
SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 38 0.003
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.011
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 36 0.011
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34) 36 0.020
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 35 0.026
SB_49732| Best HMM Match : TPR_1 (HMM E-Value=4.2) 35 0.034
SB_34245| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 31 0.42
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 31 0.42
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 30 0.74
SB_53145| Best HMM Match : TPR_1 (HMM E-Value=3.4e-08) 30 0.98
SB_857| Best HMM Match : Mago_nashi (HMM E-Value=0) 30 0.98
SB_15001| Best HMM Match : Calx-beta (HMM E-Value=0.023) 29 1.3
SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10) 29 1.7
SB_36132| Best HMM Match : GBP (HMM E-Value=8.7e-28) 29 2.3
SB_6576| Best HMM Match : TPR_2 (HMM E-Value=1.2) 28 3.0
SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 28 3.9
SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 28 3.9
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 27 6.9
SB_8887| Best HMM Match : G-patch (HMM E-Value=1.2e-08) 27 6.9
SB_14112| Best HMM Match : Amino_oxidase (HMM E-Value=3.3e-13) 27 6.9
SB_9773| Best HMM Match : TPR_2 (HMM E-Value=3.2e-06) 27 6.9
SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65) 27 6.9
SB_39440| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 27 9.1
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 63.7 bits (148), Expect = 6e-11
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 12 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 71
+LK +GN + G +A+ YT+AI +DP N++ +SNRS AF KL ++ +L+DA + V
Sbjct: 11 KLKDQGNAALSAGDTQKAIEFYTEAILLDPANHVFYSNRSAAFAKLSKYNEALEDARKCV 70
Query: 72 RLQPQWAK 79
++P W K
Sbjct: 71 EIKPDWGK 78
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQD 66
P E K KGNE K G F A HYT+AIK +P + L+SNR+ F KL L+L++
Sbjct: 362 PVKSAEEKEKGNEYFKKGDFPSAQKHYTEAIKRNPEDAKLYSNRAATFQKLAAFNLALEE 421
Query: 67 ANETVRLQPQWAKNP 81
A E +R ++ P
Sbjct: 422 AKEGLRAVAMASRPP 436
Score = 30.3 bits (65), Expect = 0.74
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 12 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 71
E K GN K F A H+ A +++P+N ++N + AF + + +++ E V
Sbjct: 232 EEKELGNAAYKKKDFDTAHKHFNNAKELNPDNMTFYTNNAAAFFEEGNYEECIKECLEAV 291
Query: 72 RL 73
+
Sbjct: 292 EV 293
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 61.7 bits (143), Expect = 3e-10
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 11 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 70
E+LK+K N K+G + A+ YTQAI++ + + NRSF +LK + + L+L DAN+
Sbjct: 188 EDLKLKANGYFKEGNYNSAITFYTQAIELKADVPAYYGNRSFCYLKTEYYGLALADANKA 247
Query: 71 VRLQPQWAKNPFSMVAFSMAL 91
++L ++ K + +MAL
Sbjct: 248 IQLDRKYIKGYYRRATANMAL 268
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 61.7 bits (143), Expect = 3e-10
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 1 MDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQH 60
+ E +P E+ K G+ C K G F +AV Y++AIK+DPNN++L+ NRS A ++ Q
Sbjct: 14 LTEQSRPGLHEKAKWAGDACSK-GDFQKAVELYSEAIKLDPNNHVLYGNRSAACIRTWQL 72
Query: 61 YLSLQDANETVRLQPQWAK 79
+L+D + L P W K
Sbjct: 73 EQALEDGKKAAELNPLWPK 91
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 57.6 bits (133), Expect = 4e-09
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 12 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 71
++ ++GNE G + A+ +TQAIK+D ++ NRS+ F +L Q +LQDA+ +
Sbjct: 271 QIAVRGNEMANLGNYQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDADVAI 330
Query: 72 RLQPQWAKNPFSMVAFSMALSGL 94
L P W K F AL+GL
Sbjct: 331 SLAPDWPKGFFRR---GRALAGL 350
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 57.2 bits (132), Expect = 6e-09
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 2 DEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHY 61
D K E+ K++GN+ GK+ A+ YT AI P N+IL+ NR+ ++LK +
Sbjct: 492 DMLNKHLASEDRKLQGNDHFNHGKYKAAISAYTLAISGAPYNHILYGNRAQSYLKSEDLR 551
Query: 62 LSLQDANETVRLQPQWAKNPFSMVAFSMALSGLGF 96
L D V L+P W K F ++ A LG+
Sbjct: 552 EGLTDGRRAVVLKPDWTKGQF---RYAQAFFELGY 583
>SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQH---YLS 63
P LK GNE +F+ AV Y +A+ + PN+ +L++NR+ AF+K Y +
Sbjct: 331 PPRALHLKTIGNEAFCKQQFLTAVNMYNEALNLAPNSAVLYANRAAAFIKRSWEGDVYAA 390
Query: 64 LQDANETVRLQPQWAKNPF 82
L+D ++ + L P K F
Sbjct: 391 LRDCHKALTLDPNHTKAHF 409
>SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10)
Length = 452
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQD 66
PT + +GN+ + ++ A+ Y ++I P NY R+ AF+ L+++ SL D
Sbjct: 281 PTDERYYRSEGNKKMISKEYRTAIDLYNKSILASPINYFSWCQRATAFISLNKYEESLLD 340
Query: 67 ANETVRLQPQWAK 79
E ++L P+W K
Sbjct: 341 FEECIKLNPKWVK 353
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 12 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 71
+ + KGN+ VK +F EA+ YT+ I++ ++ L SNR+ LKL++ +L D +
Sbjct: 866 DFREKGNDAVKREEFQEALDWYTKGIELTKTDHRLFSNRALCHLKLNKPKEALADCESCL 925
Query: 72 RLQPQWAK 79
+L+ + K
Sbjct: 926 KLEEHFGK 933
>SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 11 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNR 50
EELK +GN+ +K+ KF EA+ Y++AI++D N + NR
Sbjct: 92 EELKNEGNQLMKEEKFQEAINSYSRAIELDNTNSVYPCNR 131
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/90 (22%), Positives = 43/90 (47%)
Query: 2 DEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHY 61
+E K E K +GN ++ A+ Y++AI+ P+ + NRS A++ + +
Sbjct: 26 EEQDKVKLAEAKKAEGNREYGLKNYVSAIALYSKAIEFAPHVATFYGNRSAAYMMISNYD 85
Query: 62 LSLQDANETVRLQPQWAKNPFSMVAFSMAL 91
+L+DA ++ + + K + +A+
Sbjct: 86 KALEDALLSIEIDNNFVKGHYRAAKCHLAM 115
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 12 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDA 67
+LK KGN K K+ EAV YTQA+ D N ++NR+ K + Y+ + A
Sbjct: 122 QLKEKGNLAFKQQKYEEAVKLYTQALNQDRTNTAFYTNRAQLDKKCIKAYVHMGKA 177
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 36.3 bits (80), Expect = 0.011
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 5 KKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYI----LHSNRSFAFLKLDQH 60
+K +++ K +GN+ G + +A YT+A+++DP N L+ NR+ KL ++
Sbjct: 28 RKAKSLQAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKN 87
Query: 61 YLSLQDANETVRLQPQWAK 79
+++D + + L + K
Sbjct: 88 DQAIEDCTQAMNLDHTYTK 106
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 36.3 bits (80), Expect = 0.011
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 5 KKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYI----LHSNRSFAFLKLDQH 60
+K +++ K +GN+ G + +A YT+A+++DP N L+ NR+ KL ++
Sbjct: 28 RKAKSLQAKKQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKN 87
Query: 61 YLSLQDANETVRLQPQWAK 79
+++D + + L + K
Sbjct: 88 DQAIEDCTQAMNLDHTYTK 106
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 35.5 bits (78), Expect = 0.020
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 14 KIKGNECVKDGKFIEAVLHYTQAIKMDP--NNYIL---HSNRSFAFLKLDQHYLSLQDAN 68
K+KGN+ K K+ +A+ YT+AI++ P N L + NR+ A+ +++Q +++A
Sbjct: 145 KLKGNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAYEQMNQFENVVEEAT 204
Query: 69 ETVRLQPQWAK 79
+ + L ++ K
Sbjct: 205 KALELNSKYTK 215
>SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34)
Length = 935
Score = 35.5 bits (78), Expect = 0.020
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 3 EAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNN-----YILHSNRSFAFLKL 57
+ K + ++ K +G E K K+ +Y+ A+ ++ L NRS AFLK
Sbjct: 391 QCKSASEAKKWKERGKELFKANKYSLLDEYYSLALSYAHHSDKELVSQLLCNRSLAFLKK 450
Query: 58 DQHYLSLQDANETVRLQPQWAKNPFSM 84
+ +L DA E V+ +P W+K + +
Sbjct: 451 NFLKSALTDAKECVKTRPSWSKGHYRL 477
Score = 26.6 bits (56), Expect = 9.1
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 30 VLHYTQAIKMDPNNY-----ILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKNPFSM 84
+ +Y+ AI P + L SNR +L Q+ +L DA + V +P W K + +
Sbjct: 684 IRYYSLAINYSPESCSEMRGALLSNRCLIYLNTYQYDEALADAKKCVASRPGWFKAYYRL 743
Query: 85 VAFSMALSGLG 95
S L LG
Sbjct: 744 ---SCCLKALG 751
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 35.1 bits (77), Expect = 0.026
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 3 EAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNN----------YILHSNRSF 52
++ P + E+K +GN+ K G + A+ Y A+K+ N +++ NR+
Sbjct: 2 DSDNPKSAVEIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAA 61
Query: 53 AFLKLDQHYLSLQDANETVRLQPQWAKNPF 82
LKL+++ +++DA + + + P K F
Sbjct: 62 CQLKLEKYEAAIKDATKALDIVPNDPKALF 91
>SB_49732| Best HMM Match : TPR_1 (HMM E-Value=4.2)
Length = 32
Score = 34.7 bits (76), Expect = 0.034
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 49 NRSFAFLKLDQHYLSLQDANETVRLQPQWAK 79
NRS AF KL ++ +L+DA + V ++P W K
Sbjct: 2 NRSAAFAKLSKYNEALEDARKCVEIKPDWGK 32
>SB_34245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 33.9 bits (74), Expect = 0.060
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 19 ECVKDGKFIEAVLHYTQAIKMDPNNYILHSN 49
E K FI A HY +A+K+DP+N +L N
Sbjct: 110 EGAKQKNFISARRHYEEALKLDPDNTVLRQN 140
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 31.1 bits (67), Expect = 0.42
Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 14 KIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFA 53
K KGN+ + G + E++++YT++I++ P ++NR+ A
Sbjct: 219 KDKGNDAFRSGDYKESLVYYTRSIELKP-TAASYNNRAMA 257
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 31.1 bits (67), Expect = 0.42
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 1 MDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQ 59
MD +K + + K +GNE DGK+ +A Y +A+ I ++KLDQ
Sbjct: 212 MDPKEKLAAIPKYKEEGNELYVDGKYKDAAEKYAEALGCLEQLSIREKPGDEEWVKLDQ 270
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 30.7 bits (66), Expect = 0.56
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 17 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 76
GN + F AV Y +A+ + PN+ ++H N + + + L++ + LQP
Sbjct: 235 GNVLKEARIFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAVDTYRRAIELQPN 294
Query: 77 W 77
+
Sbjct: 295 F 295
Score = 30.3 bits (65), Expect = 0.74
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 22 KDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWA 78
+ GK EA+LHY +AI++ P SN ++ ++Q + +++ P +A
Sbjct: 376 QQGKLQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQGAIQCYSRAIQINPAFA 432
Score = 29.9 bits (64), Expect = 0.98
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQD 66
PT + L N + GK E++ Y +A+++ P HSN + + + +L
Sbjct: 327 PTHADSLNNLANIKREQGKIEESIRLYCKALEIFPEFAAAHSNLASVLQQQGKLQEALLH 386
Query: 67 ANETVRLQPQWA 78
E +R+ P +A
Sbjct: 387 YKEAIRIHPTFA 398
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 30.3 bits (65), Expect = 0.74
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 100 KTTTMMSSWSAGRSLQPPVDLGYNDSSQEKEDVIPERKNKYSKAQARQR 148
K + S+ GR + V G SS ++++ + E+K K+ K +A ++
Sbjct: 129 KALNLHHSYLGGRKINVEVTCGGGGSSDKRKEKLQEKKKKFKKKRAAKK 177
>SB_53145| Best HMM Match : TPR_1 (HMM E-Value=3.4e-08)
Length = 200
Score = 29.9 bits (64), Expect = 0.98
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 10 VEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNY 44
V+ L +K + K+ EA+LH+ +A+K+ P+N+
Sbjct: 161 VQALILKASLLQALDKYQEALLHFREAVKLSPSNF 195
>SB_857| Best HMM Match : Mago_nashi (HMM E-Value=0)
Length = 900
Score = 29.9 bits (64), Expect = 0.98
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 11 EELKIKGNECVKDGKFIEAVLHYTQAIKM 39
E L+++GN+ KD +F +A + YT+AI +
Sbjct: 536 EGLRLRGNQYFKDKQFKQASVFYTKAINL 564
>SB_15001| Best HMM Match : Calx-beta (HMM E-Value=0.023)
Length = 308
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 62 LSLQDANETVR-LQPQWAKNPFSMVAFSMALSGLGFVVGKTTTMMSSWS 109
+SL++AN T+ L P++ + S + F V K+ T+++SW+
Sbjct: 235 ISLKNANITINVLNDDTQGRPYNFLLCRYEFSAISFDVAKSVTVVASWT 283
>SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10)
Length = 466
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 16 KGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSN 49
+G +++EA+ Y A+K+DPNN L ++
Sbjct: 420 RGTAAYHSEEYVEALKDYESALKIDPNNESLRAD 453
>SB_36132| Best HMM Match : GBP (HMM E-Value=8.7e-28)
Length = 368
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 102 TTMMSSWSAGRSLQPPVDLGYNDSSQEKEDVI 133
++ ++SWS+ + L PV L Y D S K+ V+
Sbjct: 72 SSQINSWSSIKELDKPVQLVYPDQSSHKQLVL 103
>SB_6576| Best HMM Match : TPR_2 (HMM E-Value=1.2)
Length = 116
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 13 LKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVR 72
L++ N+C K G+F A + ++DPN R A + + Q ++ + ET+R
Sbjct: 25 LQLVANDCYKMGQFYYAAKAFDVLERLDPNPEYWEGKRG-ACVGIFQQIIANHEPRETLR 83
>SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 517
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 13 LKIKGNECVKDGKFIEAVLHYTQAIKMDP 41
LK GN+ K G ++EA+ YT A+++ P
Sbjct: 436 LKDAGNKKFKQGCYVEAIKIYTSALEVCP 464
>SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 158
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 13 LKIKGNECVKDGKFIEAVLHYTQAIKMDP 41
LK GN+ K G ++EA+ YT A+++ P
Sbjct: 77 LKDAGNKKFKQGCYVEAIKIYTSALEVCP 105
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 13 LKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNR-SFAFLKLDQHY 61
LKI+G + +G +A YT A+++ + I +++R S + LD++Y
Sbjct: 346 LKIRGTKAFVEGNVSKATKMYTDALQLQTDLDINNNSRISQTDVSLDKYY 395
>SB_8887| Best HMM Match : G-patch (HMM E-Value=1.2e-08)
Length = 739
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 86 AFSMALSGLGFVVGKTTTMMSSWSAGRSLQPPVDLGYNDSS 126
A S A++ GFV + T + W++G P L YN+++
Sbjct: 226 AASAAMTKSGFVFDERTGLYYDWNSGLYYNPRTCLYYNNNT 266
>SB_14112| Best HMM Match : Amino_oxidase (HMM E-Value=3.3e-13)
Length = 482
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 125 SSQEKEDVIPERKNKYSK-AQARQRYKQGKL 154
S+Q+ E P+R N Y K + +Q+YK +L
Sbjct: 116 SAQDMETYTPDRTNLYQKLTEMKQKYKDDEL 146
>SB_9773| Best HMM Match : TPR_2 (HMM E-Value=3.2e-06)
Length = 553
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 33 YTQAIK--MDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAK 79
Y QA K + NN LH NR+ A+ ++ S+++ + +L P W +
Sbjct: 28 YGQAEKDLVAANNPDLHFNRAMAYKYQEEFKQSVENFRQAHKLDPGWVE 76
>SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65)
Length = 290
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 10 VEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYIL 46
V+ K K N+ + K I AVL Y+ A++ P Y+L
Sbjct: 184 VKSKKKKKNKQKEKNKVILAVLVYSNALRAKPGPYVL 220
>SB_39440| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 244
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 10 VEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNY 44
V+ L K + +++ ++ +A+ H A+K++ NNY
Sbjct: 6 VKTLLKKARDSIRNKEYKDALKHCKAALKLEKNNY 40
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.129 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,199,066
Number of Sequences: 59808
Number of extensions: 187044
Number of successful extensions: 419
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 376
Number of HSP's gapped (non-prelim): 46
length of query: 154
length of database: 16,821,457
effective HSP length: 76
effective length of query: 78
effective length of database: 12,276,049
effective search space: 957531822
effective search space used: 957531822
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
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