Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001541-TA|BGIBMGA001541-PA|IPR013026|Tetratricopeptide
region, IPR001440|Tetratricopeptide TPR_1
(154 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 65 4e-12
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 59 3e-10
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 48 6e-07
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 44 1e-05
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 36 0.002
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 36 0.004
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 30 0.18
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 0.96
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 27 1.7
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 2.2
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 26 2.9
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 25 3.9
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 5.1
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 25 6.8
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 25 6.8
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 25 6.8
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 25 6.8
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 24 8.9
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 24 8.9
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 24 8.9
SPBC29A3.15c |rsm23||mitochondrial ribosomal protein subunit S23... 24 8.9
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 24 8.9
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 65.3 bits (152), Expect = 4e-12
Identities = 30/80 (37%), Positives = 52/80 (65%)
Query: 12 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 71
ELK + N+ +K+G ++A+ YT+AI++D N IL+SNRS A LK + + L++ DA++ +
Sbjct: 7 ELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAI 66
Query: 72 RLQPQWAKNPFSMVAFSMAL 91
P++AK F +A+
Sbjct: 67 ECDPEYAKAYFRRATAHIAI 86
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 59.3 bits (137), Expect = 3e-10
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 11 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 70
EELK KGN + A+ ++TQAI +D N+IL+SNRS + + +L+DA +
Sbjct: 3 EELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKC 62
Query: 71 VRLQPQWAKNPFSMVAFSMALSGLG 95
L+P WAK A AL GLG
Sbjct: 63 TELKPDWAKGWSRKGA---ALHGLG 84
Score = 54.4 bits (125), Expect = 7e-09
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQD 66
P EE ++KGNE K G F A+ YT+ K P++ NR+ A+LK+ ++D
Sbjct: 396 PDKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRD 455
Query: 67 ANETVRLQPQWAK 79
N+ + L P +AK
Sbjct: 456 CNKAIELDPNFAK 468
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 48.0 bits (109), Expect = 6e-07
Identities = 23/69 (33%), Positives = 44/69 (63%)
Query: 11 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 70
E+LK++GN + + +A+ YT+AI++DP + + +SNR+ A+ +L Q +++DA
Sbjct: 84 EKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTC 143
Query: 71 VRLQPQWAK 79
+ L P A+
Sbjct: 144 LSLDPHHAR 152
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 43.6 bits (98), Expect = 1e-05
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 11 EELKIKGNECVKDGKFIEAVLHYTQAIKM--DPNNYILHSNRSFAFLKLDQHYLSLQDAN 68
E+ K GN K+ K+ EA+ YT+AI + D I +SNR+ ++++ + L+L DA
Sbjct: 24 EKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDAK 83
Query: 69 ETVRLQPQWAK 79
++ R++P K
Sbjct: 84 QSDRIKPDVPK 94
Score = 38.3 bits (85), Expect = 5e-04
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 5 KKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNN----YILHSNRSFAFLKLDQH 60
K+ +E K +GN+ + G + +A Y++A+++DP+N L+ NR+ L+L +
Sbjct: 218 KQVRKLENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRP 277
Query: 61 YLSLQDANETVRLQPQWAK 79
+L D++ + + + K
Sbjct: 278 EEALSDSDNALAIDSSYLK 296
Score = 31.9 bits (69), Expect = 0.045
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPN 42
P VE L ++G G+ +A+ H+ +A+K+DP+
Sbjct: 174 PKNVEALVLRGKVMYYSGENAKAITHFQEALKLDPD 209
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 36.3 bits (80), Expect = 0.002
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 10 VEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYI----LHSNRSFAFLKLDQHYLSLQ 65
VEE + GNE + G F +A+ +T ++ P + L SNRS + K+ LQ
Sbjct: 412 VEEQQSTGNELFRKGDFSQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDLKTCLQ 471
Query: 66 DANETV 71
D +E V
Sbjct: 472 DVDELV 477
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 35.5 bits (78), Expect = 0.004
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 1 MDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQH 60
M + ++ ELK GN+ ++ A+ +YTQAI ++ I SNR+ + +
Sbjct: 142 MTKEERAKLAAELKTLGNKAYGQKEYANAIDYYTQAITCS-HDPIFFSNRAACYAAIGDF 200
Query: 61 YLSLQDANETVRLQPQWAK 79
++D +E + L + K
Sbjct: 201 EQVIKDTSEALSLDSSYVK 219
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 29.9 bits (64), Expect = 0.18
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 33 YTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKNPFSMVAFSMAL 91
+ QA++ +P+N IL + A +++ ++ N V LQPQ+ + +M ++ L
Sbjct: 461 FRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSNMAVSNINL 519
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 27.5 bits (58), Expect = 0.96
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 10/58 (17%)
Query: 26 FIEAVLHYTQAIKMDPNN--------YILHSNRSF--AFLKLDQHYLSLQDANETVRL 73
+I+A+ Y QAIK DP N IL NR F A L L + +++DA + +
Sbjct: 650 YIKAIQSYDQAIKFDPKNAHAAQGIAIILAQNRQFSKALLILSKVREAIKDATTLINI 707
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 26.6 bits (56), Expect = 1.7
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 4 AKKPTTVEELKIKGNECVKDGKFIEAV--LHYTQAIKMDPNNYILHSNRSFAFLKLDQHY 61
++K ++ + +KGN V+D + I+A+ + + + PNN S ++ F+ L + +
Sbjct: 359 SRKSSSGQSSSLKGNVNVEDKRLIQALPAISFFFLSSISPNNVAASSAKTSLFIALKRCF 418
Query: 62 LSLQDAN 68
D +
Sbjct: 419 GKTNDGS 425
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.2 bits (55), Expect = 2.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 123 NDSSQEKEDVIPERKNKYSKAQARQRYKQGKL 154
ND+ KE++I + KNK S+ R + Q +L
Sbjct: 791 NDNLGNKENIISDLKNKLSEESTRLQELQSQL 822
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 25.8 bits (54), Expect = 2.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 63 SLQDANETVRLQPQWAKNPFSMVAFSMALSGLGFVV 98
++Q+A ETV Q ++N F V S+ L+G FVV
Sbjct: 464 TIQEAIETVMSIKQKSRNTFVCVTGSLHLTGGVFVV 499
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 25.4 bits (53), Expect = 3.9
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 14 KIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRL 73
KIK E ++D F E + DP N +L+ + L L++ S+ D N T ++
Sbjct: 693 KIKDYEDLEDANFDEEWSKAADLMSDDPENQVLYEGNLNSSLSLNED-PSVSDENLTQKV 751
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 5.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 83 SMVAFSMALSGLGFVVGKTTTMMSSWSAGRSLQPPVD 119
S + S++L + G T T SS S GR+ PVD
Sbjct: 482 SACSISISLMDIAKTYGLTNTGKSSLSVGRNSLHPVD 518
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 24.6 bits (51), Expect = 6.8
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 73 LQPQWAKNPFSMVAFSMA-----LSGLGFVVGKTTTMM 105
L+P W ++ SMA L GLGFVV TM+
Sbjct: 29 LKPYWWNQLLKVIPMSMAPNLITLIGLGFVVINILTML 66
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 24.6 bits (51), Expect = 6.8
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 8 TTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNY-------------ILHSNRSFAF 54
T V ++K NE K K+ EA Y A+++ N ++ NR+ A
Sbjct: 60 TQVNKMKQTANEAFKRKKYEEAKKLYGLALQLALNRCTWEPSILTREEASVMLCNRAAAE 119
Query: 55 LKLDQHYLSLQDANETVRLQPQWAK 79
+ L Q +L DAN ++++ + K
Sbjct: 120 IALSQFPEALADANAALKIRNNYGK 144
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 24.6 bits (51), Expect = 6.8
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 106 SSWSAGRSLQPPVDLGYNDSSQEKEDVIPERKNKYSKAQARQR 148
SS S S + VD+ + + K D I ERKN+ A RQR
Sbjct: 497 SSTSLDSSEESEVDVENKQNVRTKYDRIFERKNQDVLAAHRQR 539
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 24.6 bits (51), Expect = 6.8
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 21 VKDGKFIEAVLHYTQAIKMDPNNYIL 46
+K G+ +A H+ +A +++PNN +L
Sbjct: 510 LKTGRNDQADFHFQRAAEINPNNSVL 535
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 24.2 bits (50), Expect = 8.9
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 3 EAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKM---DPNNYI-LHSNRSFAFLKLD 58
E + + + GNEC ++ +A YT+A+ D + I +SNR+ L +
Sbjct: 57 EGEPHEVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFE 116
Query: 59 QHYLSLQDANETVRLQPQWAK 79
+ L D + ++ AK
Sbjct: 117 NYRQVLNDCAQVLQRDSTHAK 137
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 24.2 bits (50), Expect = 8.9
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 7 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQH 60
PT++ + +KG + + L Q+++ P+N + S SF L+ H
Sbjct: 1336 PTSLSSM-LKGGSVSRTPSRQNSALRREQSVRAPPSNVAVTSANSFELLEEHDH 1388
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 58 DQHYLSLQDANETVRLQPQWAKNPFSMVAFS 88
D + + L +TV LQ + NP S+ FS
Sbjct: 85 DLYVIVLDSEQQTVLLQSNFTSNPTSLEIFS 115
>SPBC29A3.15c |rsm23||mitochondrial ribosomal protein subunit
S23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 2 DEAKKPTTVEELKIKGNECVKDGKFIEAVLH 32
D+ KK T E ++ NEC+ G + + LH
Sbjct: 269 DKLKKLKTFESHELLQNECIPAGTDLLSFLH 299
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 24.2 bits (50), Expect = 8.9
Identities = 12/67 (17%), Positives = 28/67 (41%)
Query: 5 KKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSL 64
K PT + ++ G V+ K +++ T DP++++ + D H+
Sbjct: 619 KPPTEGVDSEVNGESLVQVNKVLKSEDDNTSEASKDPSSHVKSPENIEKLKQNDDHFEVT 678
Query: 65 QDANETV 71
++ T+
Sbjct: 679 EEITSTI 685
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.129 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,776
Number of Sequences: 5004
Number of extensions: 27680
Number of successful extensions: 82
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 62
Number of HSP's gapped (non-prelim): 25
length of query: 154
length of database: 2,362,478
effective HSP length: 67
effective length of query: 87
effective length of database: 2,027,210
effective search space: 176367270
effective search space used: 176367270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 50 (24.2 bits)
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